Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------ANAC58                            <---------ANAC58                                                   ------                           --------->ZAT2                                                      <-----                           <---------ZAT2                                                      <-----                           --------->HSFB2a(1)                                              <--------                           <---------HSFC1(2)            ----------->HVH21                <---------RAP2.3(2)                           --------->HSFC1(2)          --------->LBD16                    <---------RAP2.6(2)                           <---------HSFB2a(1)--------->MYB52(2)                         <---------LBD16                      --------->ANAC58        <---------MYB46(3)                      --------->CCA1(2)                      --------->ANAC58        <-----------RAV1(1)                     <---------GLK1(1)              --------->MYB52(1)    <---------MYB46(3)<---------ANAC46               --------->ARR14(2)           --------->At4g35610    <-------GAMYB<-------GAMYB                 --------->At4g35610           <---------At4g35610   <-----------RAV1(1) <---------LBD16      --------->CCA1(2) <------NtERF2   <<<<<<<<<TBF1    --------->MYB52(1)      <---------ANAC46         ---------->DOF2 <---------ARR14(2)   tcttcttcttcttagctaacaaaaacggaagcttgctgttgttgttgtttgttgctccggagacagagagagaaagagacgctgagagatttgcggcaga  19915900                             ----------->HVH21                            =====================================HOX2a_HOX2a                           ==================HOX2a_HOX2a                           <------ZmHOX2a(2)                           --------->CCA1(2)                          --------->ARR14(2)                          <---------AGP1                          --------->AGP1                          <---------ARR11(3)                          --------->ARR11(3)                          <---------ARR14(2)                ------>MYB83------>ZmHOX2a(2)                ------>MYB46(1)               ----------->RAV1(1)   --------->MYB55(2)    <---------CCA1(2)   <---------MYB46(3)   ----------->ARR10  --------->ALFIN1------->GAMYB                                           <------ZmHOX2a(1)         <  <---------AtMYB61  <-----------HVH21                                  <---------TOE2(3)    <------- --->At4g35610 --------->MYB52(1)                                  --------->ALFIN1       ----------- ----At4g35610--------->AtMYB61             >>>>>>>>>TBF1        <---------bZIP60(2)--------->ICU4  = -NtERF2 <---------At4g35610=================HOX2a_HOX2a         <---------ANAC46 ---------->DOF2---- -At4g35610  --------->MYB46(3)       <------ZmHOX2a(1)   <------ZmHOX2a(1)   --------->ALFIN1   ----   ggcagtggttgtgctaccaacagagtcagatctgaaggaaggagaagaagaagttgaagaggaagtgaggtgtttaggaagtgggaaagatgaagttaca  19916000                                       --------->ZAT2                                       <---------TGA1a                                       <---------O2                                       --------->TGA1a                                       --------->O2                                     <---------ALFIN1                                   ------>ZmHOX2a(2)                                              <--                                  <------ZmHOX2a(2)                                              ----                                 --------->ARR14(2)                                      --------->ARR11(3)                                 <---------ARR14(2)                                      <---------ARR11(1)                                 <---------ARR11(3)                       <---------ANAC58     ------ ----------DOF2          --------->DAG2<---------ZAT2                >>>>>>>>>EIN3       <---------ARR14(2) ----GT1 <----------DOF2---------->DOF2----------->RAV1(2)         <-----------GT1       <---------ARR11(3) >GT1    ========================================bZIP_DOF    ----------->GT1             --------->ARR14(2) ================================================bZIP_DOF    <------MYB83 <---------ANAC58     <----- ----->ANAC58           =========================bZIP_DOF    <------MYB46(1)            <---------CCA1(2) ----->ANAC58     <----------ID1 --------->ARR11(3)          <---------MYB46(3)     <XXXXXXXXXXXXXXXX   agctttccaagcttttcttgaagacaaaaagcacagatcccacctgggtttttagtaaatggatggtttatacattgcataccatcacccatatcttgat  19916100                                                                                  <---------YAB1                                                                                <--------HAHB4                                                                                -------->ATHB1        >>>>>>>>>>>>>>>>>LFY                                                    <---------ICU4   <---------ANAC58                                                             --------->ATHB51   <---------ANAC58                                                             --------->ATHB12 --------DOF2                                         <------------------------ANAC81 -->ZmHOX2a(2)                                <---------GLK1(2)                <---------YAB1 --->ARR11(3)                           ------>ZmHOX2a(1)                      --------->ICU4 ----ARR11(3)                          --------->TOE2(3)              <----------DOF2 XXXXMIR774B                  --------->AtMYB61    ------>ZmHOX2a(1)<---------At4g35610        <-----   cttttgcttccaccattgttgataaccaaaaaccaaaacttccttatagattcctctgtttctgtgtgtgagcttttgagaattattagtttctcttctt  19916200                                                                                          <---------ARR14(2)                                                                                      --------->ALFIN1                                                                                     ------->MYC4                                                                                     --------->TOE1(2)                                                                                     ------->MYC2                                                                                     <-------PIF4                                                                                     <-------MYC3                                                                                     ------->MYC3                                                                                     <-------MYC2                                                                                     ------->PIF5                                                                                     ------->PIF4                                                                                     <-------MYC4                                                                                     <-------PIF5                                                                                    --------->O2                                                        <---------At4g35610         <---------TGA1a                                                        <------NtERF2               --------->TGA1a                                                        --------->At4g35610         =================                                                 --------->ALFIN1                   <---------O2                                                 <---------MYB46(3)                 =================                                               ===============================================MYC_MYB                                               <---------ANAC58                    ------->TEIL                                               <-------GAMYB                       ------------>OsbHLH66                                               <---------ANAC46                  <-------TEIL    <---                                               <---------ANAC58               --------->At4g35610<---                   <------MYB46(1)            <------MYB83                  <-----------RAV1(2)  <---                   <------MYB83               <------MYB46(1)          <---------GLK1(1)  --------->ARR14(2)        ---------->DOF2   ---------->DOF2   --------->ALFIN1  --------->ALFIN1<---------At4g35610<--- -----DOF2        <---------AtMYB61       --------->ALFIN1 <------ZmHOX2a(1)<---------HSFB2a(2)  ====   ttgagagagagaaagagagattggtggagaaagagagaaatgaagagtgggttgtggcagaggagaggggtcgagttcccagatgcacgtgggatactga  19916300        <---------ANAC58        <---------ANAC46        <---------ANAC58        <----------DOF2   <---------ANAC58   <---------ANAC58   --------->ALFIN1                                          ----------->GT1 <---------ANAC58                                           --------->DAG2 <---------ANAC46                                       --------->HSFB2a(2) <---------ANAC58                                       <---------HSFB2a(2)             <------MYB83 ==================bZIP_DOF                        --------->HSFB2a(1)                  <---------MYB46(3) ======bZIP_bZIP                                  --------->ARR14(2)                    <------MYB46(1) ------ANAC58                                     <---------ARR14(2)                   <---------AtMYB61 ------ANAC46  <---------ANAC58                   <---------ARR11(3)                  <--------P ------ANAC58  <---------ANAC58                   --------->ARR11(3)  --------->ZAT6 <-------GAMYB ------TGA1a <---------ZAT18            *TSS     <---------CCA1(2)  <-----------GT1 <---------MYB46(3) ==================bZIP_DOF             <---------AHL20(2)---------->DOF2     <----------DOF2   cttgtgtgtgccttgtggcctctctctctatttcttctctattttttcttcaaatcttccaaaaggtttttaacactaatcttttttggttggttttttt  19916400                                                                                   <----------DOF2                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                              <-------PIF5                                                                              ------->MYC2                                                                              <-------MYC4                                                                              ------->PIF5                                                                              <-------MYC2                                                                              ------->MYC4                                                                              ------->MYC3                                                                              <-------MYC3                                                                             =================bZIP_DOF                                                                             --------->TGA1a                                                                             >>>>>>>>>>HY5                   <---------MYB46(3)                                        <---------O2                   <------MYB46(1)                                           --------->PIF3(3)                  <---------AtMYB61                                          <---------PIF3(3)                 <--------P                                                  <---------TGA1a  -------                <-------GAMYB                                                --------->ANAC46 <------               <---------MYB46(3)                                            --------->O2    <-------         <----------DOF2                                          --------------->AtSPL3     ========     --------->WOX13(1)               <---------TOE2(3)         <-----------GT1   <---------ANAC58   ------------>CBF<------MYB83     ---------->DOF2   <---------ANAC46     <---------ALFIN1  <-------   ttttcatcaatcttttttggttggtttgggatggactaaaaaggttttctggtctagtgtgtaatgtaaccatacatccacgtggctttgtttcttctat  19916500                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                                        <-----------RAV1(2)                                                                                  ------->PIF5                                                                                 <---------At4g35610            <---------YAB1                                                       <---------ZAT2          --------->YAB1                                                         ----------->RAV1(2)          --------->ATHB51                                         <----------DOF2<-------PIF5          -------->ATHB1                                       <---------ZAT18  ------->TEIL         <---------YAB1                                      <---------ZAT2    <---------ALFIN1       --------------->AGL15                                 --------->ZAT2  --------->DEAR3(1) -------->AGL15                                              <---------STY1(2)--------->ABI4(1) ---------AGL15     <---------AHL20(2)                       --------->STY1(2)<---------ZAT18 ----------AGL2    --------->AHL20(2)                 <---------AHL20(2)    --------->ANAC46 ======================MADS_MADS                     <---------AHL20(2)    <---------At5g28300 ----------AGL3<---------YAB1    <----------DOF2     --------->AHL20(2)   <-----------GT1 --------->ANAC58   ttttggtttctattattgttattaaatctagctctctttttttctttggacaaaattaaatctagctcgctttaaatcaccgcacctgctacaggctata  19916600                              --------->At5g28300                         --------->ZAT14                         <---------ZAT14  --------->ZAT14                           <--------P                      --------------->AGL15                                       <------MYB83 ------                      <---------------AGL15                    ---------->DOF2    <------MYB46(1)                     --------->ANAC46     <---------ZAT14  --------->AtLEC2      <---------TOE2(2)          <---------STY1(2)  ----------->GT1     <---------ZAT14              --------->ANAC46<------   ---------->DOF2   <-----------GT1<-----------GT1  <---------ZAT6    ----------->GT1  <----------DOF2   tagctaaaagctaactaggctatacactatacagtaatttactctgtagtctgtagtattcatgtaaaagaaatggttatacgtaggtagctttaaacaa  19916700                                         --------->ZAT2                                         <---------At4g35610                                         <---------ZAT2                                         --------->At4g35610                                        ------->TEIL                                        ---------                                <---------ANAC55(2)                                       <---------ANAC58                          <------ZmHOX2a(2)                                              --------->ATHB12                         <---------ARR11(3)                                             <---------YAB1                     ---------->DOF2 <---------REM1(1)                               ------>ZmHOX2a(1)            <---------ETT(2)    --------->ANAC55(2)                                 <---------YAB1 ----->RAV1(1)      <---------AHL20(2) <-----------RAV1(2)--------->MYB52(1)--------->At5g28300    >> ----ID1  --------->ZAT14--------->ARR11(3) ----------->GT1                ----------->GT1<---------ANAC58   caaaacttactctgtagactatataaagatcaatacttgatgcagctggtaaaaaaaaaaaaacgaattgactcgagcagtaaattcctattgattgtga  19916800  Previous    Next  AGI:  At5g49100.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06868.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44794.1) Range:  from: 19914596    to: 19916340    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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