Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------At4g35610                                                                    --------->ANAC46                                                                  --------->ANAC58                 --             <----------ID1                                       --------->ANAC58                 <-    --------->HSFB2a(2)                                        ------>ZmHOX2a(1)          <---------ZAT18    <---------HSFB2a(2)                                      <---------ICU4               <---------ZAT14 <---------AHL20(2)                                   --------->At4g35610--------->At4g35610   ------ -------->AHL20(2)       <----------DOF2       --------->WOX13(1)--------->SPL7           --------->ZAT14   aattttatagaagatgggccaaaaccactttgttgacataacattgcatcaatctcatctccatccttacgctccagctaaacaaaacacagtgaacaaa  19772400                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                   --------->GLK1(1)                  ------->TEIL                  <---------ARR11(3)                  --------->ARR11(3)                  --------->ARR14(2)               --------->ANAC55(2)               <---------ANAC55(2)             --------->MYB52(1)        <---------YAB1                                       --------->YAB1     <---------AHL20(2)                                     <---------YAB1    --------->AHL20(2)                         --------->TOE2(3)    <---------AHL20(2)                   <-------TEIL   --------->ALFIN1 ------->ARR11(3) <---------ARR14(2)<---------YAB1    --------->At4g35610   ------>ZmHOX2a(1) --------ARR11(3) --------->AGP1  ----------->GT1   <-----------RAV1(2) --------->ARR14(2) ---->DOF2  ----------->HVH21     --------->YAB1  <-----------HVH21     <---------ARR14(2)  ---------   agataattttatgaatgacggatctacaagttcgaatgataaatacatacctcatcaggtgtatgatactctcgaatcctcgagccatcaaatagaaagc  19772500                                                      --------->ZAT2                                                      --------->At4g35610                                           <---------ICU4                                           <--------HAHB4               --------->ANAC58                ------>NtERF2             <---------ATHB12              --------->ANAC58--------->ARR11(3)          --------->ANAC46       ---------->DOF2      <---------At4g35610 --------->ANAC46        --- ->DOF2 <---------ALFIN1      <---------ANAC46     <---------At4g35610  --------->ANAC46<---------ARR11(3)   gaaatgtgttccactcgatgcctctcatcttggtgtaaagttccatcattttaagcagcttagcattccttctcacccaaaacactctaaaatcttcttc  19772600                                                                                                -----                                                                                                -----                                                                                           ----------                 --------->ANAC58                                                         <---------MYB59                 --------->ANAC58                                                   <---------ICU4             --------->ANAC46                   ------->TEIL            ----------->GT1  <---------ANAC55(2)             --------->ANAC58       --------->CCA1(2)                  <---------TOE1(3) --------->ANAC55(2)     --------->AHL20(2)            --------->ARR14(2)        <---------TOE2(3)      --------->YAB1     <---------AHL20(2)    <---------YAB1       <---------------AtSPL8 <---------TOE2(3) ----------->RAV1(2) ------>ZmHOX2a(1)    ----------->GT1 ----------->GT1 <---------------AGL15        <---------ATHB12 ------->ID1 --------->ANAC58      <---------ARR14(2) --------------->AGL15      --------->WOX13(1)   gtcctatataaatccacacaagttatgttattagtcagatatgttatatgtatgtactgaattaagaaaatgtaaggtttaaacaatcaatacctgaccc  19772700                                   <----------DOF2                             --------->ANAC46                           ----------->RAV1(1)                          <---------ETT(1)                          ----------->HVH21                         --------->SPL7                      <------MYB83 <---------DAG2                      <------MYB46(1)  <----------DOF2     <---------ANAC58                                              <-------GAMYB ---->TOE1(3)         <---------ANAC58                               <---------ANAC58             --- ---->TOE2(3)        --------->MYB59 <-----------GT1                 <---------ANAC58 <---------MYB46(3) ->HVH21             <---------MYB46(3)   <----------DOF2       --------->ATHB12<---------ZAT2  <----   ttaactttcagagtaacatgagttgggtccgacacaactttacgcttttgcccttccatcttcacttcattgcttccaactctgctcgttgttgacatta  19772800                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  <<<                                                                                                  <<<                                                                                                  <<<                                                                                                  <--                                                                                                  <<<                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <<<                                                                                                  <<<                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                              <---------WRKY18(1)<---                                 --------->AHL20(2)                        --------->YAB1        <---                                 <---------AHL20(2)                        <---------ICU4        <---                                <---------ATHB12                         <---------ARR11(3)      <---                                --------->AHL20(2)                       --------->ARR11(3)     -----                    <-----------GT1                                  --------->ZAT14         <-------                 <---------CCA1(1)                                   <---------ZAT14        <--------                 <---------RVE1(1)                              <---------ZAT18     <------ZmHOX2a(2)          <---------ZAT14   ------------>CBF                    --------->ZAT14     <---------ATHB12 ------>TOE2(3) --------->ARR11(3)                              <---------ZAT14    <-----------HVH21 -----ARR11(3)  <---------ARR11(3)          --------->ANAC46--------->ZAT6<------ZmHOX2a(2) <--------   tctcaaccggtctgaacagatatttcagttctcaataaatgaatacacagaaataaacaagaacagtacagtacagatcatgaccgatcactcggcttgg  19772900    --------->MYB52(1) ------->At4g35610 --------At4g35610 -----NtERF2 --->NtERF2 <<<<<<AtERF-5                             --------->MYB55(2) <<<<<<AtERF-1                             <---------MYB46(3) <<<<<<AtERF-7                            <---------AtMYB61 -------ATERF1(1)                  <------ZmHOX2a(2) <<<<<<AtERF-2                    <---------ARR14(3) -------RAP2.3(1)                 --------->ARR11(3)            <---------ANAC46 -------DEAR3(2)                  <---------AGP1                <---------ANAC55(2) -------ERF1                      --------->AGP1                <------MYB83 -------RRTF1(1)                  --------->ARR14(3)            ----------->GT1 <<<<<<AtERF-3                    <-----------ARR10             <------MYB46(1) <<<<<<AtERF-4                    --------->ARR14(2)           --------->MYB59 ------RRTF1(2)                   <---------ARR14(2)           --------->MYB46(2) ------RRTF1(3)                   <---------ARR11(3)           --------->MYB111(1) ------ATERF1(2)         --------->ZAT14  <---------DEAR3(1)  <---------MYB55(1) ----->ATERF1(2)         <---------ZAT14  --------->ALFIN1   <---------MYB52(1) ------RAP2.3(3)      <----------DOF2   <---------ANAC46    <-------GAMYB ------DEAR3(1)   <---------DEAR3(1)   <---------DEAR3(1)  --------->MYB55(2)       ---------->DOF2 ------RAP2.6(2)  <---------RAP2.6(2) <---------LBD16      <---------MYB46(3)     <<<<<<<<<ARR2 ------RAP2.3(2) --------->RAP2.6(3)------>ZmHOX2a(2)      --------->MYB111(1)    <---------ATHB12 ---->RAP2.6(3)  <---------ORA47(1)--------->CCA1(2)       --------->MYB111(2)  --------->WOX13(1) ---DOF2       --------->ZAT18   --------->RVE1(1)        <--------P           --------->MYB46(3) -ANAC58      --------->ALFIN1  ----------->ARR10--------->ANAC58             ------------>CBF -ANAC58    <---------ANAC46  ---------->DOF2    --------->ANAC58    --------->YAB1--------->YAB1   cggctcaaacggcgaagtggacggctctacagtaaagatctgcggtggttcaagcccatggttgttaggtataatggttcaacaatcaaaggcaaaacag  19773000                     <---------ANAC58       ------>ZmHOX2a(1)       --------->ANAC58                <---------AtLEC2        --------->ARR14(2)          --------->ANAC58           --------->ARR14(2)           <---------ARR14(2)          --------->ANAC46           <---------ARR14(2)          --------->GLK1(1)           <---------LBD16          <------ZmHOX2a(1)        ----------->RAV1(1)            ------>ZmHOX2a(1)      ------>ZmHOX2a(2)         --------->ANAC58             --------->KAN4(2)     <------ZmHOX2a(2)          --------->ANAC58            <---------HSFC1(2)     --------->CCA1(2)          --------->ANAC46            --------->HSFB2a(1)    --------->AGP1   <---------ANAC46  <---------CCA1(2)    --------->HSFC1(2)    <---------ARR11(3)     --------->At4g35610              <---------HSFB2a(1)    --------->ARR11(3)     <---------At4g35610   ----------------->AG   --------->ANAC58         <---    <---------AGP1   <---------ANAC58  <---------GLK1(1)----------->GT1 --------->ANAC58         <---   agattagatctaggatttggatgacttgcagcacaagcaacatatcctataaccaaaacagaaaattcctgcgcaagttacagaataagtctagggtttt  19773100                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  <--                   <---------ARR14(2)       <---------SPL7                                        ===                  --------->ATHB12        --------->ZAT6                                          <--         ------->GAMYB                  ------------------>SPL14                                  <--         --------->DEAR3(1)            ----------->HVH21                                          <--         --------->ANAC46            <---------At4g35610                                          ---        --------->MYB46(3)           --------->At4g35610                         ====================       <---------At5g28300         <---------LBD16                               ------->GAMYB    ===   --------->TOE1(3)            <---------ZAT2--------->SPL7    <<<<<<<<<<<<<<<<<LFY             ----   --------->ANAC46--------->ARR14(2)--------->LBD16        --------->YAB1     --------->At4g35610<--   --------->TOE2(3)            <---------ZAT14          ----------->RAV1(1)   <---------At4g35610--- ------ANAC58--------->HSFB2a(2)--------->At4g35610  --------->ZAT18      <------NtERF2        ------ ------ANAC58<---------HSFB2a(2)<---------At4g35610  <----------ID1      <---------MYB46(3) <--------   cttacccttaaccgcctcgaagattggctacgactgctccggtgacagtacgaaggggacaacaataaacaatggtggctcaactgtctctctcccactc  19773200      <---------RAP2.6(2)     <---------At4g35610     <------NtERF2     --------->ATERF1(1)    <---------MYB46(3)   <---------RAP2.6(2) -------->ALFIN1 ----->MYC2 ------MYC3 ------PIF5 ------MYC2 ----->PIF5 ----->MYC3 ------>O2 -------bZIP60(2) ====================bZIP_DOF -------O2 -------ANAC46 -------ANAC55(2) ------>ANAC55(2) =======MYC_MYB ====================bZIP_DOF -------->OsbHLH66 -------TGA1a ------>TGA1a                                                                      <----------DOF2 ----->HVH21                                                  <-----------GT1     ----------------->AGL1 -ALFIN1  <----------DOF2             <----------DOF2 ---------->ID1         --------->ALFIN1       -   acgtggtggctgcttttgggttttgatatgctcagtgtttcttttgcaaacccctcgtcgtttttaacccaaggatgaagttgggccttaatgggctgat  19773300  Previous    Next  AGI:  At5g48710.1    Description:  ubiquitin-related. similar to ubiquitin-related [Arabidopsis thaliana] (TAIR:AT5G48700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71030.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 19772291    to: 19772798    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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