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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                      --------->MYB52(1)
             <----------DOF2
        --------->ARR11(3)
        <---------ARR11(3)                         --------->YAB1
        <---------ARR11(1)                         --------->TOE2(3)                               -
        --------->ARR14(2)                         --------->TOE1(3)                               -
       <---------CCA1(2)     ---------->DOF2  <---------MYB59<---------ANAC58          --------->AHL20(2)
 --------->KAN4(2)--------->ZAT6        <---------DAG2       <---------ANAC58       --------->GLK1(1)
---HVH21<---------ARR14(2)  ------->GAMYB<----------DOF2  <-----------RAV1(1)<---------CCA1(2)<-----
 
agcacattccatatctctttaagactaacaacgaaagacttcacctttgcctaatcttaatgtgttgtgccagtttcgatatatctgaaatcaaataaca  19740100
                                                              <-----------GT1
                                                         --------->AHL20(1)
                                                         <---------AHL20(2)
                                                  --------->HSFB2a(2)
                      --------->YAB1              <---------HSFB2a(2)
        --------->ANAC58                       <---------ARR14(2)
        --------->ANAC46                       --------->ARR14(2)
-------->ANAC58      <-------TEIL   ----------->GT1----------->GT1
-------->ANAC58  <---------YAB1    --------->ARR11(3)    --------->AHL20(2)        --------->YAB1
-----ID1--------->ANAC58           <---------ARR11(3)   --------->AHL20(2)        <---------ATHB12
 
acaaggaaaacacgaaaaacatgattcatgacattagagatgttaaatccaatctggaaattaattaacaaggtaatcaaatccaatgaaaacatacaat  19740200
                                      --------->ARR14(2)
                                      --------->GLK1(2)                          --------->HSFB2a(2)
                                      <---------ARR14(2)                         <---------HSFB2a(2)
                                     <---------GLK1(2)                  <-----------GT1
                                 ------->GAMYB                       --------->TOE1(3)       -------
                              ----------->RAV1(1)                    --------->TOE2(3)       <------
                        --------->ARR11(3)                        =========================RAV  <---
                        <---------ARR11(3)                        ----------->RAV1(1)   ------>ZmHOX2a(1)
       ------->TEIL    --------->GLK1(1)  ------>ZmHOX2a(1)<------ZmHOX2a(1)   ----------->RAV1(2)
 
tagacatatgaagcttaatgagtctgaaatcttcaacagagattcctctctgagcatcaagaggatgaacaacattaacctcttctgggtccttaagctc  19740300
                                                                               <---------WOX13(1)
                                                                             --------->ATHB12
                                                                         --------->YAB1
                                                                         <---------ICU4
                                                                         --------->ATHB12
                                                                         -------->ATHB1
                                                                        <---------ATHB12
                                                                        --------->ICU4
                                                                   <----------DOF2
                                                                  ------>ZmHOX2a(2)
                                                                 <------ZmHOX2a(2)
                                --------->YAB1                  --------->ARR11(3)
                               <---------ATHB12                 --------->ARR14(2)
                             --------->WOX13(1)                 <---------ARR14(2)
                           <---------ATHB12                     <---------ARR11(3)
-->ARR11(3)          --------->MYB52(1)                  ---------->DOF2<---------YAB1         <----
---ARR11(3)       --------->ANAC46 =====================================HOX2a_HOX2a            <----
-------DOF2     ----------->RAV1(1)<------ZmHOX2a(1)--------->AHL20(2)--------->YAB1           <----
 
tttgctgtgaaaataaaacccacaaaacgaatcaatcaggaacatggaaattgaattaaaaaaagacgatctttaatcattgattgaaacttactagtgc  19740400
                                                                        --------->ALFIN1
                                                                     <-----------RAV1(1)
                                                                  <---------YAB1
                                                                 <---------AHL20(2)
     --------->HSFB2a(2)                                     <---------AHL20(2)
     <---------HSFB2a(2)                                   *TSS<---------YAB1    <---------YAB1
-----ANAC46                 <----------DOF2              <----------DOF2<---------ANAC58
-----ANAC58     --------->ANAC58    ------>ZmHOX2a(1) --------->ANAC58  <---------ANAC58        ----
-----ANAC58     --------->ANAC58  ------>ZmHOX2a(2)   --------->ANAC58  <---------ANAC46  ----------
 
gtcgaagtccagaaattggaagccatagcttctttgatccttcaacttcaaaaatacaagctttttatttttatggtgtggataatgagagcataaagac  19740500
                                                                            ---------->DOF2
                                                                       --------------->AGL15
                                                                       <---------------AGL15
                                                                      ----------------->AGL2
                             <--------ATHB1                           ----------------->AGL3
                             <---------ICU4                           ----------------->AG
                             -------->HAHB4                     <---------AHL20(2)
                            --------->ICU4                      --------->AHL20(2)
                            <---------YAB1                  --------->AHL20(2)
  ----------->GT1           <---------ATHB51         ----------->GT1<-----------GT1
 --------->ANAC58         --------->YAB1         <---------YAB1<---------AHL20(2)
 --------->ANAC58      ----------->GT1      <----------DOF2 <---------AHL20(2)
----->AtMYB61         --------->DAG2     <-----------GT1    --------->AHL20(1)
>DOF2                ---------->DOF2    <-----------GT1    --------->AHL20(2)--------->DAG2
 
caccaaggaaaaatacaaaacaaaaaaagtaataattcagtatttatcttttttgatagaaaaaaaattatttaccaaaaaaagtttttaaaattcttat  19740600
                 --------->YAB1                                     <----------DOF2
            <------------------------ANAC81                        <---------ANAC58--------->MYB59
    <----------DOF2                                <---------AHL20(2)              <---------TOE1(3)
 <---------ARR11(3)                          <----------DOF2       <---------ANAC58<---------TOE2(3)
 --------->ARR11(3)                      <-----------GT1 <-----------GT1 --------->ANAC46
 
atgaaatctttttttttttttcatatttctcatcttcatcaatttgacctttgttttatttcacatttttgcttctacgagaggtttaggttttggagaa  19740700
                                          <---------ICU4
                                         --------->ICU4                           --------->ANAC55(2)
                                         <---------YAB1                      <---------ZAT6
                                        <---------TOE2(3)                    ----------->GT1
                                       <---------ICU4             <------MYB83<-----------HVH21
                      --------->YAB1   --------->YAB1             <------MYB46(1) <---------ANAC55(2)
                     --------->ICU4   <---------ATHB51           --------->MYB46(2)
                     <---------YAB1 --------->YAB1  <---------YAB1----------->GT1 <---------ANAC55(1)
                   <---------ICU4  --------->ZAT6   <---------TOE1(3)   <-----------GT1
   ----------->GT1 --------->YAB1 <---------TOE2(3) <---------TOE2(3)   --------->YAB1        ------
---------->DOF2   --------->ICU4 <-----------GT1<----------DOF2  --------->MYB59<-----------GT1
 
aataaaagggaaaacaaacccattatgatgaacaattaacaataatgtttactttaagattaataggtttggtaataacagtgttacatgtttgccacaa  19740800
                                      <-----------GT1
                                   <---------AHL20(2)
                               --------->YAB1                                                  -----
                               <--------HAHB4                                              <--------
                               <---------ICU4                                              ---------
                              --------->ICU4                                   <---------At4g35610
                              <---------ATHB12                   <---------At4g35610---------->DOF2
---->DOF2                   --------->YAB1                   --------->ALFIN1  --------->At4g35610
 
agctagatggatgggcaattgtggaagtctctaatcatttttttctgtgcgataagtcttggagatggaggtgattctctacagcttcaaagccaatttg  19740900
                                                                     --------->KAN4(1)
                                                             <---------AtLEC2
                                                        --------->ARR11(3)
                                                        <-----------ARR10
                                                        <---------ARR14(2)          --------->ANAC58
                        <---------YAB1                  <---------ARR11(3)          --------->ANAC58
             <----------DOF2                            --------->ARR14(2)      --------->ANAC46
---->At4g35610      ------>ZmHOX2a(1)                  <---------GLK1(2)      ----------->RAV1(2)
-ARR14(2)    <---------DAG2              <---------YAB1<---------CCA1(2)  <----------DOF2
>ARR14(2) <-----------GT1  <---------WOX13(1)      --------->ZAT18  <---------KAN4(2)             --
 
ctgaaggcagaattcactttttcctctgtgattgttctgtagttctcatagaagtccagtatctccatggcaatattctttacctgcaacccattgcccc  19741000
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AGI:  At5g48630.1   
Description:  cyclin family protein. Identical to Cyclin-C1-2 (CYCC1-2) [Arabidopsis Thaliana] (GB:Q9FJK7); similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48640.1); similar to unknown [Populus trichocarpa] (GB:ABK96032.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Transcription regulator cyclin (InterPro:IPR015429); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like (InterPro:IPR011028)
Range:  from: 19738772    to: 19740460    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g48640.1   
Description:  cyclin family protein. Identical to Cyclin-C1-1 (CYCC1-1) [Arabidopsis Thaliana] (GB:Q9FJK6); similar to cyclin family protein [Arabidopsis thaliana] (TAIR:AT5G48630.1); similar to unknown [Populus trichocarpa] (GB:ABK96032.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin-like (InterPro:IPR011028)
Range:  from: 19740759    to: 19742915    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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