Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                      --------->GLK1(1)           ---                                                             --------->ANAC58                     ---                           <---------WOX13(1)                --------->ANAC58             <---------GLK1(1) --------->MYB46(3)      --------->ATHB12                  --------->MYB52(1)            <---------ARR11(3) --->ZAT6              <---------MYB52(1)             <---------ATHB12<---------GLK1(1)  --------->ARR11(3) ->P  --------->AHL20(2) --------->MYB52(2)--------->AHL20(2)--------->ANAC46        <---------At4g35610 >AtMYB61            ----------->GT1     ----------->GT1   <-----------GT1--------->TOE2(3)------>ZmHOX2a(2)   ctaaccaaaaaaatgacatatatcggttaattggctcttaagtaagttaatatccaatgaataacgccatagatttccataaatctgagatgatctctgc  19700800                                                                                          -----------                                                                                        <---------ANAC58                                                                                        <---------ANAC46     <---------TOE2(2)                                               --------->ZAT18    <---------ANAC58 -------->MYB52(1)                                      <----------DOF2             <---------ANAC58 ------>ANAC58          --------->YAB1 <---------------AtSPL8    <-----------------------TaNAC69(2) ------>ANAC58     --------->WRKY18(1) --------------->AtSPL8---------->DOF2        <---------ANAC58   aagaacggaggtttttttttggtcaataagaagaacaagtttatgtactaaaatgttcctttagaaagaagtgaacaagttggagaccgtgcttgtaaaa  19700900                                                      --------->AHL20(1)                                            <---------ICU4                                            --------->ATHB12        --------->YAB1                                            -------->HAHB4         <---------AHL20(2)                                           <---------YAB1       --------->AHL20(2)                                           --------->ICU4      <---------AHL20(2)                                         <---------ICU4        --------->AHL20(2)                                         --------->YAB1    <---------AHL20(2)                                     --------->AHL20(2)    --------->AHL20(2)                     <--                     <----------DOF2 <---------AHL20(2)    --------->AHL20(1)         --------->AtLEC2                 <----------DOF2    --------->AHL20(2)--------->AHL20(2)              ----------->GT1 >GT1        <---------ZAT18  <---------TOE2(3)       <---------AHL20(2)           <-------TEIL <----   ccccttatacaatagtagactttctttcatttaagaaatttaaaaatgattccaaataaaataaaataaataataaactttgacattcatgtaaaatttt  19701000                                                              --------->ANAC58                                                           <------NtERF2                                     <---------ARR11(3)   --------->LBD16           ----------->HVH21                                     --------->ARR11(3)  --------->ANAC58           <---------MYB52(1)                                    --------->RVE1(1)    --------->ANAC58          <-----------HVH21                          <---------AHL20(2)             <------NtERF2             <-------GAMYB ----                          --------->ATHB12        ---------->DOF2                 --------->ANAC46 --                         --------->AHL20(2)      <---------WRKY12              ------>NtERF2     ----                    --------->ANAC55(2)        --------->TOE2(3)              --------->ANAC46   ----       ----------->GT1   --------->ICU4        <-----------HVH21         <-----------ARR10     <----- -------ANAC46      <---------ANAC55(2)       --------->ANAC46--------->ANAC58--------->DEAR3(1)----- -------GT1       --------->AHL20(2)--------->CCA1(1)   <---------LBD16------>ZmHOX2a(1)     --------   acgtcgatattgtaaaacaattacatatttattagcaaatatctctcaacgtcaaaggcccggcaaacaattcctaatctccgcccgttacggtgcaaca  19701100        --------->ATHB12        <---------ICU4                                              --------->ANAC55(1)       <---------YAB1                                               --------->ANAC55(2)       --------->ICU4                                               <---------ANAC55(2)     --------->YAB1                                      <---------YAB1      <---------TOE2(3)    ----------->GT1                                <---------AHL20(2)     --------->AHL20(1)    <---------YAB1                      <---------ANAC55(2)         --------->ANAC58 ----->ANAC46                           <---------ANAC46--------->AHL20(2)<---------AHL20(2) ------->ANAC46               <-----------GT1      --------->AHL20(2)     --------->AHL20(2) ----->ANAC58              --------->YAB1       --------->ATHB12    --------->ANAC46 ----->ANAC58          <---------AHL20(2)--------->TOE2(3)          ----------->GT1 ----ALFIN1            --------->AHL20(2)--------->TOE1(3)  ----------->TBP<---------AHL20(2)       < -->GAMYB         <---------YAB1        ----------->GT1 <---------AHL20(2)<---------AHL20(1)    ----- --->RAV1(1)    <-----------GT1       <-----------GT1 <---------YAB1--------->ANAC58  --------->AHL20(2)   cacaaaatgataattgaattactatttttttataactatattacgttaaatgatttattaatataaaaaaacgtaatttaatgttccattaaacaactat  19701200                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                 <---------ALFIN1                                                               <---------ALFIN1                                                             ------>NtERF2                                         <---------ANAC58    ----------->RAV1(1)                                         <---------ANAC58   --------->ANAC46     ------>MYB46(1)            *TSS    <---------TOE2(3)   <---------ETT(1)                     ----     ------>MYB83        <---------GLK1(1)                  ----------->HVH21                    <--- -----------GT1          --------->GLK1(1)         <----------DOF2 --------->ANAC46              ---- ------>TBP            <---------ICU4  <-----------GT1    ------>ZmHOX2a(1)               --------->At4g35610   ataaaccaacttagcgaccacttaagcatttcccttactatttacgttctcttctttctcctccgacacactccaaaactcataaatctatctgatgcga  19701300                          ------>ZmHOX2a(2)                        --------->ARR14(3)                        <-----------ARR10                        <---------ARR14(3)                        --------->ARR11(3)                        <---------ARR11(3)                        <---------ARR14(2)             <---------ANAC58             <---------ANAC58             --------->ANAC55(2)       <----------DOF2             --------->YAB1         --------->ARR11(3)          <----------DOF2<------ZmHOX2a(2)          <---------ATHB12 ----->ARR14(2)         --------->ARR14(2)         ------>MYB46(1) ------ARR14(2)        <------ZmHOX2a(1)           ------>MYB83                            ------->GAMYB ----->GLK1(2)      <---------LBD16 <---------ARR11(3)      <---------YAB1             <---------WRKY38(1)   atttgactaactctttcgtaattcaggatcttactacaaatctttaactcaccaatcttcttcttattcaaagattagagagaaaatggacaacgagctg  19701400                           <------NtERF2                          --------->LBD16                         --------->DEAR3(1)                        <---------LBD16                       --------->ABI4(1)                       ------>NtERF2                      ------->GAMYB<---------ATERF1(1)                      --------->DREB2C(2)                      <---------ALFIN1                      --------->DEAR3(1)                     --------->MYB46(3)                    --------->ABI4(1)                   --------->DEAR3(1)--------->ANAC58                   <---------ALFIN1------>NtERF2    ----------->RAV1(1)                   --------->AtMYB61 --------->ANAC58             --------->At4g35610              --                  <---------MYB55(2)--------->ATERF1(1)------->GAMYB                              <--                  --------->MYB46(3)<------NtERF2  --------->AtMYB61             --------->ATHB12<---                --------->ANAC46  <---------RAP2.3(2)------>MYB83 <---------At4g35610            ----             <---------ARR14(2)   <---------DEAR3(1)--------->MYB52(1)      <---------YAB1       ----             --------->ARR14(2)   <---------RAP2.3(3)------>MYB46(1)     --------->ICU4  <----------DOF2   tttatgaacacagagtttccaccaccgccggagatggcgacgcatttcgaacaccaacagtcttcttcatcggccatgatgcttaattgggctttaatgg  19701500                                           ------->GAMYB                                          --------->ANAC58                                          --------->ANAC46                                         --------->At4g35610                                        --------->MYB52(1)                                        <---------DOF5.7(2)                       <----------DOF2 <---------WRKY45                       --------------->AGL15       --------->LBD16 <---------------AGL15      --------->ANAC46<-----------------AG--------->ANAC58     <---------LBD16  <-----------------AGL1   --------->ARR14(2) <-----------------AGL2   <---------ARR14(2) ----------------->AGL3 ---->ZmHOX2a(2)      <-----------------AGL3 ----ZmHOX2a(2) --------->GLK1(2)      <---------WRKY12 ------ARR14(2)<---------ARR11(3)      <---------WRKY38(1)          <----------DOF2     ------------- ----->ARR14(2)<---------GLK1(2)   --------->DAG2           ---------->DOF2         <---------At4g35610 --->TEIL    <---------YAB1       ---------->DOF2        ----------->RAV1(1)   <----------DOF2   atccaaatccgcatcaagattcttcctttttatgggaaaagtcaacggaacaacaacaacaacaaagcatctttgactctgctttaagctcattagtctc  19701600                                       ----------->TGA1                                       --------->ALFIN1                                       ----------->HVH21                                      <------NtERF2                                      --------->At5g28300                                      --------->ATERF1(1)                                     <---------MYB46(3)                                    <---------DEAR3(1)                                    <---------ANAC46                                    <---------DREB2C(2)                                   <---------ABI4(1)                                   --------->ATERF1(1)                                   <------NtERF2                                  ------>NtERF2          <------NtERF2          <---------DEAR3(1)         <-----------HVH21       --------->ALFIN1         ------>NtERF2           ----------->HVH21        --------->RAP2.6(2)      <---------AtMYB61        --------->DEAR3(1)      <------NtERF2        --------->RAP2.3(3)     <---------ABI4(1)        --------->RAP2.3(2)     <-------GAMYB                                                    ----       --------->RAP2.3(1)      --------->ATERF1(1)                                              <---       <------NtERF2           <---------DEAR4(2)                                             <------      <---------ATERF1(1)      <---------MYB46(3)                                             -------      ------>NtERF2            <---------ATERF1(1)                                           <-------     --------->ANAC46          <---------DEAR3(2)                                            --------     <---------DEAR3(1)       <---------DEAR3(1)                                           --------->YAB1     --------->DEAR3(1)       <---------DREB2C(2)                                          <---------ICU4   <---------ATERF1(1)        --------->ALFIN1                                            --------->ICU4  --------->DEAR3(1)         <---------ABI4(1)                       ---------->DOF2      <---------YAB1  ----------->HVH21         ------>NtERF2                        --------->At4g35610    --------->YAB1  --------->At1g77200       --------->LBD16          <---------At4g35610             ----------->GT1 --------->DEAR3(2)        <---------DEAR3(1)        --------->At4g35610        <---------HSFC1(2) -------->WRI1            <---------LBD16 <---------ANAC46--------->ZAT14       --------->HSFC1(2) --   atcaccgacgccgtcaaattccaacttctccggcggtggcggtgacggttttctcatcagagaactcatcggaaagcttggaaacatcggtaataataat  19701700  Previous    Next  AGI:  At5g48560.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT3G07340.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73299.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 19701232    to: 19704377    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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