Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ALFIN1            --------->AtMYB61                                             <---------ANAC46           <---------MYB55(2)                                             <---------ANAC58         --------->ARR14(2)                                               <---------ANAC58     <---------ANAC46     <---------HSFB2a(2) ----------->GT1       <---------YAB1    <---------At4g35610   --------->HSFB2a(2)--------->DAG2       <---------AHL20(2)    --------->At4g35610  <---------LBD16    ---------->DOF2 --------->TOE1(3)     <---------AtLEC2    --------->ZAT2<---------DAG2         <---------YAB1     --------->TOE2(3)  ------->TEIL        --    <---------ZAT2<----------DOF2     --------->ICU4     <-----------GT1  <---------AtLEC2--------->ANAC58 ----AtSPL3--------->MYB46(3)       ------->TEIL   <---------TOE2(3)<---------TOE2(3)     --------->ANAC58   ttttgtagctggaaccaccactttctctctggaaaatgtatttatgaaaagttaagttttaaccttaattaagtttgcatgtatgcatgaacaagacaaa  19289700                                               --------->ATHB12                                              <-------TEIL                                          --------->ARR11(3)                                          <---------ARR11(3)                                    -----                                          <---------AHL20(1)              ----------->GT1      <-----                                          --------->AHL20(1)           -------->P            --------                                    ----------->GT1                    ------->TEIL --------->LBD16             ---------->DOF2        <----------ID1            <---------AHL20(2)   <---------LBD16             --------->MYB52(1)    ----------->GT1            --------->AHL20(2)  <---------LBD16   ----------->GT1                --------->DAG2          <---------AHL20(2)    <---------ARR14(2) ------->AHL20(2)                ---------->DOF2          --------->AHL20(2)    --------->ARR14(2)   aaaaaatgtaacaaataaaggagagaactaaaacaaaaaggaaaaatattcattagggaattatatatatatcaacctgtaaaatccgggagcaatcttg  19289800                                                                        <---------MYB52(1)                                                                       <---------RAP2.6(3)                                                                       <-------GAMYB                                                                  --------->ALFIN1                 <-                                                                <---------ANAC58                   <-                                                         <-----------ARR10                         <-                                                 <---------DEAR3(1)   <---------MYB46(3)    <-------- ---->ATHB12         <----------DOF2       <---------ANAC46     <---------ANAC58  <---------DEAR3(1) ----YAB1      <---------YAB1        --------->ANAC46    <---------ARR14(2)<---------ANAC55(2)  <---- ->YAB1     <---------YAB1      --------->ARR14(2)       --------->ARR14(2)--------->ANAC55(2)<------   attgtgatgctcttgttattgttctttggtatggaatccacagcgtcttggacggagcgaaactgagcgtggccgttaagtgagacggtgatgactttgt  19289900                                                                                ------->GAMYB                                                                              ------>MYB83           -------->P                                                         ------>MYB46(1)           ------>MYB83--------->ALFIN1                                      --------->MYB52(1)           ------>MYB46(1)                                                  --------->TOE1(2)         --------->MYB46(3)                                                 --------->TOE2(2)         <---------MYB59<---------MYB46(3)                                  ------->GAMYB         --------->AtMYB61                                                  --------->AtMYB61         <---------MYB111(1)    <---------ANAC46         <---------ANAC46  --------->MYB46(3)      <---------PCF2   <---------AtMYB61               --------->ZAT14     <---------MYB52(2)      <---------PCF5   <---------DEAR3(1)              <---------ZAT18     --------->DEAR3(2) --------ANAC58       <---------MYB52(1)               <---------ZAT14     <---------MYB55(2) --------ANAC46      --------->LBD16                 <---------At4g35610  --------->ANAC46 --------ANAC58    <---------LBD16               <-----------HVH21        --------->ANAC58 --DOF2 --------->DEAR3(2)   <---------AtMYB61  ------>ZmHOX2a(2)   --------->At4g35610 -----RAP2.6(2)  --------->ARR14(2)      <-----------RAV1(1)        --------->ZAT2 -----RAV1(1)    <---------ARR14(2)   ------->TEIL   --------->At4g35610  --------->ANAC58   ggcctgagggaccaacccatttccggtggtgatggtgttgaatctgttgatcgtcagtggagtttgaacaagctgcaaccaacgaaaaacgaaaacataa  19290000                                                                                              <------NtERF2                                                                                      --------->MYB52(1)                --------->YAB1                                          <---------ANAC46    ---------               --------->AHL20(2)       <---------YAB1                  <---------ANAC58    <--------      --------->ANAC58                  --------->ICU4          >>>>>>>>>>>>>>>>>LFY <---------ARR14(2)      --------->ANAC58               ----------->GT1            ------>NtERF2   ---------->DOF2    -- --------->ALFIN1                ---------->DOF2    --------->ICU4      <---------ANAC58  <----------   gcagtggaacgatacaaataataagagagaaacagaaaagagataattgagggaattagtaagttgcgccattggcttgtgagaaaggaaacggtcggag  19290100                  <------ZmHOX2a(2)                 <---------AGP1                 --------->ARR11(3)                 --------->GLK1(2)                           <-----------GT1                 <---------ARR11(3)                      <----------DOF2 --------->AHL20(2)------>ZmHOX2a(2)            --------->DAG2 >ETT(1)         <---------ARR14(2)            ---------->DOF2   <----------DOF2 -DEAR3(1)*TSS   --------->ARR14(2)   ------->TEIL --------->ALFIN1            <-----------HVH21 --------->GT1  <------ZmHOX2a(1) --------------->AtSPL8 ------>ZmHOX2a(1) --------->MYB52(1)     <-- -HVH21 <---------YAB1       <-----------TBP   <---------ZAT14  <---------DAG2------->GAMYB     <----   taagtaaattacgatggaggatctataggttttatatatgtacttgtactaaagtggtcctttttacctttctgtctcaacggtcatattttttgtggtg  19290200                                                                   ------>ZmHOX2a(2)                                                                  --------->CCA1(2)                                                                  <------ZmHOX2a(2)                                                                 --------->AGP1                                                                 <---------AGP1                                             ---------->DOF2     --------->ARR11(3)                                          --------->AtLEC2       <---------ARR11(3)                                          --------->ANAC58       <---------ARR14(2)          ---------->DOF2            <---------bZIP60(1)         --------->ARR14(2) -------ANAC46          <---------AHL20(2)--------->ANAC58--------->ANAC46                          < -----ZAT14     ---------->DOF2      --------->bZIP60(1)--------->ANAC46        ---------->ID1   <---   aagtgaaggaaacaaagacaaagtattttttttttgttgacatcaggcaaagaattatacacaacaagatctaaatgtttttgtcttcatatgtattagc  19290300                                          --------->YAB1                                         <---------YAB1                                        --------->AHL20(2)                     ----------->GT1                                        <---------AHL20(2)                  <------MYB83                                       --------->YAB1                       <------MYB46(1)                                   <---------YAB1                    <---------ANAC46                                  <---------AHL20(2)      <---------ANAC58 --------->MYB59                                  <---------AHL20(1)      <---------ANAC58 --------->MYB46(2)              --------->ANAC58    --------->AHL20(2)  <---------ANAC58  <-----------HVH21              --------->ANAC58   --------->YAB1       <---------ANAC58 <---------ZAT6            --------->TOE1(2)   <---------YAB1        --------->ATERF1(1)  --------->MYB111(1) <---------At5g28300         ------>ZmHOX2a(1)  --------->DAG2       <---------ANAC58 -----------GT1              <---------YAB1   ---------->DOF2        <---------ANAC58    <-----------GT1 -------DOF2--------->TOE2(2)--------->ICU4  <---------AHL20(2)   <---------CCA1(2)    <---------AHL20(2)   ttttactgtttaaaccaaggaattgagagtccttattataattttaataaaaggtagcctgcctgcctatatcgtgttaggtcgtttattttttctattt  19290400                                                                                  <----------DOF2                                                                                  <---------DAG2                                                                              <------------MYB.PH3(1)                                                                            <-----------GT1                                                                         --------->TGA2(1)                  <---------------AGL15                                  --------->bZIP60(1)                  ===================================================================================    --------->ANAC55(2)                                                  <---------REM1(1)      <----    <---------ANAC55(2)                                                  <---------bZIP60(1)  -------    <---------ANAC58                            <---------ANAC58       --------->YAB1        <-------    <---------ANAC55(1)                         <---------ANAC58      --------->ICU4         --------    <---------ANAC46    <---------TOE2(3)       <---------ANAC46      <---------ATHB12       <-------    <---------ANAC58    <---------TOE1(3)<---------TOE2(3)        --------->MYB46(3)--------->ATHB12  <-----------GT1<-----------------AGL2---------->DOF2        <-------TEIL ----------->HVH21 --------   ggaattacgtgtttggctaactatttcaggttttgagtttataaaggtttgcgtttatttcagattcaaccaatgatgtaacagctttattggtaatcat  19290500                                            --------->AHL20(1)                                            <---------AHL20(1)                                            --------->AHL20(2)                                            <---------ARR11(3)     ------>NtERF2                          --------->ARR11(3)  --------->At4g35610                       <---------AHL20(2)  --------->ZAT2                           --------->AHL20(2)  <---------At4g35610                   <---------ICU4  <-----------GT1 ==========MADS_MADS <---------AHL20(2) <---------AHL20(2) -----YAB1    <---------ICU4         --------->YAB1    --------->ZAT14 -->YAB1     --------->ICU4         <---------YAB1     <---------ZAT14 --ATHB12    <---------YAB1       --------->YAB1 --------->YAB1 ->ICU4    --------->YAB1        <---------YAB1--------->AHL20(2) --YAB1   <---------YAB1       <----------DOF2 <---------AHL20(2) --------->AGL3      --------->AHL20(2)--------->AHL20(2)               ----------->GT1   aaatagctgcccatgataattgttttaatataactttgataataaatatattaatagtttactgcttccatgaattgtatattggactattggagaatgc  19290600  Previous    Next  AGI:  At5g47500.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G19730.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD65006.1); similar to pectinesterase family protein [Brassica oleracea] (GB:ABD64977.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 19288186    to: 19290110    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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