Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------ARR11(3)                                                    --------->ARR11(3)                                                 ----------->RAV1(1)                                               --------->At4g35610               --------->LBD16                                            --------->At4g35610                 <---------HSFB2a(2)                                          =====================================HOX2a_HOX2a                                          ------>ZmHOX2a(2)                     --------->HSFB2a(2)--                                         --------->At4g35610                   <---------LBD16    <--                                        <---------AGP1                      --------->ZAT14      <---                          <---------ICU4<---------ARR14(2)                  <---------ZAT14      ----                    ----------->GT1     <---------ARR11(3)              =============================                    <------MYB83  --------->ATHB12 --------->REM1(1)    =============================                    <------MYB46(1)   ----------->ARR10                 <------ZmHOX2a(1)        <---         --------->ANAC58 --------->YAB1--------->ARR11(3)           --------->HSFB2a(2)         <---         --------->ANAC58<---------ATHB12<---------At4g35610    <---------HSFC1(2)               ----         --------->ANAC46<---------YAB1 --------->ARR14(2)      --------->HSFC1(2)               ---- ----->GT1     --------->ALFIN1  <---------YAB1<---------At4g35610   <---------HSFB2a(2)         <---   tgaatatgtccacacaagtggaaggtaatcataccatgagtggatctgcagcaacatcttggaagaagcctctaggactgttctgggaaacagaaaacag  19262200     <-------GAMYB    <-----------RAV1(1) ---->ZmHOX2a(2) ----ZmHOX2a(2) ------AGP1 ----->AGP1 =====HOX2a_HOX2a ====HOX2a_HOX2a                                                ------>ZmHOX2a(2) ------ARR11(3)                                   <---------ARR14(2) ------ARR14(2)               <----------DOF2     --------->ARR14(2) ----->ARR14(2)          ---------->DOF2 <---------HSFB2a(2)  <---------ARR11(3) ----->ARR11(3)       ------>NtERF2   --------->GLK1(1)       --------->ARR11(3)         <---------MYB52(1) --------ARR10       --------->ANAC46 <---------GLK1(1)--------->ANAC46       --------->ATHB12   atctcgctgttgtctctgtttctgcgccaaagctttggagatttcagaagcagatagactccatgatctggatagaaacttcattggctcccttggtgtc  19262300                                                                           ------>ZmHOX2a(2)                                                                           ======================HOX2a_HOX2a                                                                         --------->ARR14(2)                                                                 --------->ARR14(2)                     --------->GLK1(2)                           <---------ARR14(2)       <------ZmHOX2a(1)          --------->At4g35610                                  --------->LBD16   --------->MYB52(1)          <---------At4g35610                                <---------LBD16 --------->LBD16         --------->ARR14(2)                     ------>ZmHOX2a(1)<---------GLK1(2) <----------ID1         <---------ARR14(2)                     ==================================HOX2a_HOX2a    ----     <---------TOE2(3)             <-----------GT1<---------ALFIN1       <---------ARR14(2)     <----   tgaggctgaggtatctgagagacaatctcttcacttcttacatttccttcctccaactcgtgctccggattctctgatccgaataacgacgaggaactat  19262400                                                                                              <------                       ------>MYB46(1)                                      --------->At4g35610                       ------>MYB83                                  <---------DAG2          <-------                     --------->AtMYB61                            <---------ARR11(3)        <--------                   ------>MYB46(1)                                --------->ARR11(3)        ---------      --------->YAB1--------->ZAT2                            ---------->DOF2   ---------->DOF2 ----->YAB1        ------>MYB83                    --------->TOE1(2) <----------DOF2 ----------->GT1 -----YAB1        <---------ALFIN1      <---------ZAT14  ----------->TGA1   <---------At4g35610     -   cattccaatcggaataaaacccaccttccatttccttcttagtttacagaaaacccaagatgacgaaagaactttttgagatgaaagaggttaataatgt  19262500                                                             --------->ZAT6                                                       --------->ANAC58                                              <------ZmHOX2a(2)                                             <---------ARR14(2)                      <---------ANAC46                                             --------->ARR14(2)                      <---------ANAC58                                             --------->ARR11(3)                     <---------STY1(2)                                             <---------ARR11(3)                     --------->ZAT2                                            <---------At4g35610                --------->ZAT6 -----RAV1(1)  ---------->DOF2              --------->At4g35610              *TSS   --------->STY1(2) --TOE2(3)   <---------YAB1           ---------->DOF2  --------->ANAC58      --------->YAB1 -ICU4   <---------GLK1(2)      =====================HOX2a_HOX2a          <----------DOF2    -------- >YAB1 <---------YAB1           <------ZmHOX2a(1)    <---------ATHB12     --------->TOE2(3)<--------- -------->WRKY38(1)        <---------------------WRI1---------->DOF2  <----------DOF2<---------ANAC58   tgttgactcaagattgtgaaagagaagaagacgaggacaacaaagcagatcaccaataagcaaacactacctctttctttaatactagcttggaattgtt  19262600                                      <---------HSFB2a(1)                                      --------->HSFC1(2)                                      --------->HSFB2a(1)                                --------->MYB52(1)                    ---------->DOF2                              <---------AHL20(2)  <---------------AGL15                          --------->AHL20(2)      <---------YAB1  ---------->DOF2 --->GT1           <---------YAB1     <---------HSFC1(2)    ---------->DOF2 ---CBF  --------->YAB1 ----------->GT1           --------------->AGL15   caaatatcaaatcagaaaatgatgctaagtaaataaacgaagtttccatgttctgatattagtaaagagaaagaaaggaagagacagagagaacacaaat  19262700                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                  --------->LBD16                                       ----------->GT1                                <-----------RAV1(2)                                     <---------ANAC55(2)                                <---------LBD16                                         --------->ANAC55(2)                <---------At4g35610                     <-------TEIL        <---------ATHB12       --                --------->At4g35610<------ZmHOX2a(1) ----------->GT1        --------->ICU4         --           <----------DOF2     <-------TEIL         <---------------AtSPL8--------->GLK1(1)    <-----   cgatgtaattgtgctttgagcagactcaatagattcaggaaatgtctcatcaaatgggtacaaatgtagattagagaaatcatggaagtctcgtaatatg  19262800                                                                                                    <                                                                                                   --        --------->CCA1(2)                                                                        ----     <---------TOE2(3)                                                                          -----     <---------YAB1     <-----------RAV1(1)                                                     ----- -------->YAB1      --------->ARR14(2)                                     ---------->ID1       <---- --------HAHB4      <---------ARR14(2)                                 <---------ANAC58         <---- ---------ICU4      --------->ARR11(3)                                 <---------ANAC58   --------->HSFB2a(2) -------->ATHB51   <------ZmHOX2a(1)                             <----------DOF2          <---------HSFC1(1) ------->ICU4     <------MYB46(1)                         --------->At4g35610             <---------HSFB2a(2) ------->AHL20(2) <------MYB83 ----------->ARR10          <---------At4g35610<----------DOF2  ------- ----YAB1       <--------P--------->ALFIN1<---------MYB46(3)   <----------DOF2            --------->HSFC1(1)   aataattaagataagatggtaggatactgtggggacatatgcattggtttgagagccataagctgctcttttgtcttgtctttttttgagttcgagaaga  19262900            --------->DOF5.7(2)     ------>MYB83           --------->TOE2(3)        ------>MYB46(1)                     --------->MYB46(3)           --------->TOE1(3)        -------->P                  --------->ANAC55(2)      <<<<<<<GRF7                   ======================================MYC_MYB    ----------->HVH21              --------->ORA47(1)           --------->ANAC46   <---------MYB59                <---------MYB111(1)           <---------ANAC55(2)  --------->At4g35610             --------->MYB46(3)            =========================bZIP_DOF  <---------At4g35610             --------->DEAR3(1)            --------->O2                     ---- -----------GT1                   ------->GAMYB   --------->ICU4--------->ANAC55(1)              <--- --------->HVH21       <---------ANAC58           <---------YAB1--------->ANAC58                 ---- ----->CCA1(2)         <---------ANAC58         --------->YAB1  <---------TGA1a                  <--- ---->ARR14(2)      --------->GLK1(1)    <---------GLK1(2)      <---------O2  <----------DOF2-------- ---->ARR11(3)   ------->GAMYB    ========================================MYC_MYB            -------- -----ARR11(3)<---------DOF5.7(2) <---------MYB46(2)            --------->TGA1a         <------------ -----ARR14(2)--------->MYB52(1) --------->DEAR3(2)             =========================bZIP_DOF<--- ---->ARR10<----------DOF2  --------->ZAT6--------->GLK1(2)     --------->ANAC58        -------------   tttgacctgacaactttaacggagttcgtgactctaccgaccagtttctgttataattgtagtcacacgtaacaacaacgcttttggtttctctataaag  19263000                                                                                   <-----------GT1                                                                                 <---------ICU4 ----->ARR11(3)                                                                 <---------YAB1 ------ARR11(3)                                                               <--------HAHB4 ----->ARR14(2)                                                               <---------ICU4 ------ARR14(2)                                                               --------->ATHB51 -->DOF2                                                                     --------->ICU4        -- ->YAB1               ---------->DOF2                                        <---------YAB1  -------- ---AGL15         <---------ZAT6                                          <---------YAB1     <------- ------GLK1(2)    ----------->GT1                                       <-----------GT1      <------- -->AGL15     ---------->DOF2                                  <----------DOF2--------->YAB1<--------   atactcccacgagttcaaaagtgttaaagacaattcgaataactctcggctattggtttgtttttctttgtatattaccattattattccttccatatct  19263100  Previous    Next  AGI:  At5g47440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G17350.1); similar to hypothetical protein 25.t00033 [Brassica oleracea] (GB:ABD64982.1); contains InterPro domain Pleckstrin-like, plant (InterPro:IPR013666); contains InterPro domain Protein of unknown function DUF828, plant (InterPro:IPR008546); contains InterPro domain Pleckstrin-like (InterPro:IPR001849) Range:  from: 19260758    to: 19262577    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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