Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ANAC58                                                               <---------ANAC58                                                        <---------YAB1                ------------------------>ANAC81        <---------AHL20(2)      <---------ICU4                               --------->YAB1      <--------HAHB4                               -------->ATHB1      --------->ATHB12                            --------->ICU4     <---------------AGL15           ----------->GT1 <---------YAB1     <---------YAB1     <----------ID1            <---------ATHB51   --------->YAB1       ----------->GT1----------->GT1 <---------AHL20(1) ----------DOF2---------->DOF2    --------->DAG2  --------->AHL20(2) ------>At4g35610     ---------->DOF2<----------ID1<---------ICU4            <---------YAB1        -- -------At4g35610----------->GT1 ---------->DOF2  <---------AHL20(2)     <----------DOF2<----------DOF2   agctttgatcattagggaaaagaaaaaagaaaaaaaaaagggagaaaaacaaattattattttttgcttacatttctttatatttgtatgcttttatttt  19246000           <---------MYB52(1)          --------->TOE2(3)                    <---------AHL20(2)         ----------->GT1                      <---------AHL20(2)         <---------ANAC46                     --------->AHL20(2)         <---------ANAC58                     --------->AHL20(1)           <---------MYB52(1)     <--         <---------ANAC58                     <---------AHL20(1)      <-----------GT1   ----------->HVH21        <-------TEIL                    --------->YAB1           --------->AHL20(2)     --------->WRKY12     <------ZmHOX2a(1)     --------------->AtSPL8                <---------AHL20(2)   --------->At4g35610 ------->ZAT6      <---------ANAC46  <---------ICU4         --------->AHL20(2)        ------>ZmHOX2a(1)   gactctaggatgcgttaattttcgtttaatctgtactaaaaattagaatttattagttttgaataaataaaatcacagtttgtttatcctctgaccaaaa  19246100                                                   --------->SPL7                                               <---------LBD16                                             <-----------GT1                                         --------->ARR14(2)                                       ---                 ----------->GT1         <---------ARR14(2)                                       ---                --------->ANAC58       --------->LBD16       <---------REM1(1)                    ---              --------->MYB52(1)    --------->MYB52(1)     <---------ZAT14                    <------         <---------WOX13(1)         ------->TEIL --------->LBD16                              <------        <------------CBF           <---------ARR14(2) --------->ZAT14  ----------->GT1        ------- <---------YAB1 --------->ANAC58   --------->ARR14(2) <---------ZAT14---------->DOF2          <------ ---------------AGL3   --------->AHL20(2)<-----------ARR10 --------->ZAT14                    <------   actataactggattgaaaacggaaattaaaccaagacgaaccggatttaaccggactccagtgttgtaagagaaagtaaacaagttcccaagcgtttcgt  19246200                                                                   <---------ICU4                                                                   <-----------RAV1(2)                                                                   --------->YAB1                                                                <---------ICU4                                                        <---------ANAC46                                                        <---------ANAC58  <-------GAMYB      --------->MYB52(1)                                <---------ANAC58  ----------->GT1 ------>ANAC58                                          --------->ANAC55(2) -------->GT1                                           <---------ANAC55(2) ------>ANAC58                                          <---------ANAC55(1) ---ANAC58                                              <---------bZIP60(2)                      ---- ---ANAC46                                            --------->MYB52(1) ----------->GT1    <-------- -->ANAC55(2)                                         <-----------GT1 <------ZmHOX2a(1)     <-------- ---ANAC55(2)                                  ----------->GT1 --------->ICU4            <----------CDC5 ---ANAC58          ------------>CBF       ---------->DOF2   --------->YAB1            <---------DEAR3(1)   aagtaaaaaaacgaatgggctaaacaattagtctaaatgggccttaaaagagtgaataacgtgtcataatcaggagcgttaaatttagggcgatgagtgt  19246300                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                             --------                                                                                             --------                                                                                            ------->MYC2                                                                                            ------->PIF5                                                                                            <-------MYC2                                                                                            ------->MYC4                                                                                            <-------MYC4                                                                                            <-------PIF5                                                                                            ------->MYC3                                                                                            <-------MYC3                                                                                           ==========                                                                                           --------->TGA1a                                                                                           <---------O2                                                                                           --------->bZIP60(2)                                    <---------MYB46(3)                                     <---------TGA1a                            <---------ALFIN1                                               >>>>>>>>>>HY5                           <---------ZAT14                                                 --------->PIF3(3)                           --------->ZAT14                                                 <<<<<<<<<<HY5                         --------->ANAC46                                                  ==========              --------->WRKY12      ----------->GT1                                        <---------bZIP60(2)              --------->WRKY38(1)<----------DOF2                                           <---------PIF3(3)          --------->LBD16--------->ANAC58               --------->AtLEC2--------->At5g28300--------->O2          <---------TOE1(2)<---------ZAT18          <-----------HVH21 <---------DEAR3(1)-------------   --------->ALFIN1 --------->ARR14(2)         --------->ZAT18       <---------LBD16   <------------- ----->ETT(2)<-----------HVH21 <---------DAG2  <---------ZAT14  --------->AHL20(2)     -------------- -ANAC58 --------->LBD16 --------->ANAC58      --------->ZAT14  <---------AHL20(2)  <---------At4g35610 -ANAC58<---------LBD16<-----------GT1    ---------->DOF2      --------->AHL20(2)   --------->At4g35610   cgagagtgttcccgcgttcaccgattcactccactctttggttaaaaagtccactgtcatggaaaattaatcgcggtgatttacacagatgccacgtggc  19246400     <----------DOF2 <-------TEIL ------MYC3 ------MYC2 ----->MYC3 ------MYC4 ----->PIF5 ----->MYC2 ------PIF5 ------>ANAC58 ------>HSFB2a(1) -------HSFB2a(1) ------>ANAC58 --->HVH21 ->ALFIN1<----------DOF2 ===============bZIP_DOF                       ---------->ID1           <-----------HVH21 ===============bZIP_DOF           <------------------------ANAC81 ---------->ID1  <------NtERF2  --- --->PIF3(2)                      <-----------GT1               <----------DOF2   ------>NtERF2   --- ----PIF3(1)                  <---------AHL20(2)     <----------DOF2   --------->ANAC46        ------ --->PIF3(1)       ------>ZmHOX2a(1)      <----------DOF2    <-----------GT1  --------->ANAC46 <-----   acgttcgctttctttttcttcctcgtgttgattttttttcttctcttttgtccctctttggtttttcttttccccttcacaaggcgcgatttgagtcgcc  19246500                                                                                               <-----                              --------->TOE2(3)                                              <-------                       <---------ANAC46                                                  <---------ANAC58                     ------>NtERF2                                                       <---------ANAC58 ------>ANAC58       --------->LBD16                                 <-----------GT1    --------->HSFB2a(1) ------>ANAC58      --------->ANAC46                           <---------ANAC58         <---------HSFB2a(1) --->ATERF1(1)      <---------DEAR3(1)                         <---------ANAC46         <---------HSFC1(2) -NtERF2           <---------LBD16                             <---------ANAC58         --------->HSFC1(2)   tcgcatttcaaacccttcttctccggcgtaaacctttgctctatctctcgataaaaacccttgtttcgttttcaccttcgtatttagcgatgcttccaca  19246600                                                                         <---------ARR11(3)                                                                         <---------ARR14(2)                                                                         <-----------ARR10                                                                         --------->ARR11(3)                                                                   <------NtERF2                                                                   <---------MYB52(1)   <----------DOF2                                                                  <-----------HVH21<---------ANAC58                                                                  ------>NtERF2    <---------ANAC46                                                                 --------->DEAR3(1)<---------ANAC58                                                                 <---------ANAC46 <---------ZAT2                 <----------DOF2                               ------>NtERF2      --------->ZAT2           --------->ARR14(2)       ------>MYB83              --------->ANAC46 <---------At4g35610       <-----------HVH21            ------>MYB46(1)         <---------ALFIN1   --------->LBD16      --------->DEAR3(1)          <---------MYB59      --------->ZAT2    --------->ARR14(2)   --------->REM1(1)      --------->YAB1               <---------ZAT2   <---------CCA1(2)   <---------ALFIN1      <---------ATHB12  --------->At4g35610--------->ANAC58 --------->At4g35610 ------>ZmHOX2a(1)     --------->WOX13(1)  <---------At4g35610--------->ANAC58--------->ANAC46<------ ----ALFIN1<---------ARR14(2)   --------->ARR11(3)     --------->At4g35610   <---------LBD16  ------- --ALFIN1 <---------DEAR3(2)    <---------ARR11(3)     <---------At4g35610<---------GLK1(1)  <-------   ctcctacaccgtcgattcgctttcgcaatcacaagacctagcttcagctatactctcagcttccacgccgtcgagtatctccgctgcttgctcttccgtc  19246700                                                                                           <------NtERF2                                                                                          -----------                                                                                         ----------->HVH21                                                                                       <---------RAP2.3(1)                                                                                      <---------ANAC46                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                             ------>ZmHOX2a(2)                                 --------->ETT(2)                           <------ZmHOX2a(2)                                 --------->bZIP60(1)                       <---------ARR11(3)       -                                 <---------bZIP60(1)                       <---------ARR14(3)      --                              --------->ALFIN1                             --------->AGP1--------->DEAR3(1)                     ----------->RAV1(2)                                   <-----------ARR10       <-                   --------->ANAC58                                        --------->ARR14(3)     <--                   --------->ANAC46                        --------->LBD16 --------->ARR11(3) ------- -----HVH21        --------->ANAC58<------NtERF2     <---------DAG2        <---------ARR14(2) ------- -->LBD16         --------->SPL7 <---------ETT(2)    <----------DOF2       --------->ARR14(2) ------- --ANAC46       --------->ARR14(2)------>NtERF2  <---------MYB52(1)      ----------->ARR10------>NtERF2   gaatcgtttcttcagtcgcatacgcctgatcagtgtcgccatttcttctctgttacttttccgagtttaatctgtaagatcttcggtttcggcgacacga  19246800                                                                    --------->ATHB12                                                                   <---------ATHB12                                                                 --------->MYB52(1)                                                                <---------WRKY38(1)        <---------LBD16                                       ------>NtERF2      <---------ARR14(2)                  <------MYB46(1)     <------NtERF2     <---------At4g35610                <--------P           ------>NtERF2     <---------GLK1(1)                <---------MYB46(3)     <---------ATERF1(1)     --------->At4g35610            --------->SPL7           --------->RAP2.6(2)     --------->GLK1(1)             ------>MYB46(1)          --------->ATERF1(2)  <------NtERF2                    --------->MYB52(1)       <---------ATERF1(2) ------>NtERF2                     ------>MYB83             <---------DEAR3(1) >RAV1(1)--------->ANAC46         <---------SPL7            --------->DEAR3(1) -------->ANAC46                 --------->MYB46(3)         <---------RAP2.6(2) ------->At4g35610               <---------MYB59           --------->ATERF1(1) --------LBD16                ------------------>SPL14     <---------At4g35610             <---------ZAT14 -------ATERF1(1)            ----------->HVH21             --------->At4g35610   <---------ANAC46 ---->HVH21                 ------>NtERF2 <------MYB83     <------NtERF2        --------->At4g35610 -->ANAC58------>NtERF2  --------->At4g35610             <---------DEAR3(1)     <---------At4g35610 -->ANAC58--------->LBD16<---------At4g35610  ------>ZmHOX2a(2) <---------WRKY12<---------LBD16   ccgcggcatctccggcacagtcttcttcgctgcgaccgaacggttggatcgatgtaatctcggcggccaacgatttggatttagcggagagagtatacaa  19246900  Previous    Next  AGI:  At5g47390.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G16350.1); similar to myb family transcription factor [Brassica oleracea] (GB:ABD65013.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 19244017    to: 19246085    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g47400.1    Description:  similar to hypothetical protein 25.t00068 [Brassica oleracea] (GB:ABD64961.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71184.1) Range:  from: 19246389    to: 19248749    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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