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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
--------->
ANAC55(2)
--------------->
AGL15
<---------
ANAC55(2)
-------->
P
--------->
AHL20(2)
------>
MYB46(1)
<---------
ICU4
<---------
ARR11(3)
<---------
YAB1
================================
MADS_MADS
<---------
ARR11(3)
--------->
MYB59
--------->
ARR11(3)
--------->
ARR11(3)
----------->
GT1
<---------
TOE2(3)
------>
MYB83
------->
DOF2
<---------
RVE1(1)
<---------
TOE1(3)
<---------
MYB59
---->
AHL20(2)
<---------
CCA1(1)
--------->
YAB1
----------------->
AGL1
<---------
ETT(2)
-----
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
----------------->
AGL3
<------
MYB83
<--
>
AHL20(2)
--------->
ARR11(3)
--------->
ARR11(3)
<---------------
AGL15
<------
MYB46(1)
-
AHL20(2)
<---------
AHL20(1)
<---------
ARR11(3)
--------------->
AGL15
--------->
MYB59
aaaagataattacataagatatttggataatttcgaaatatcatatttttaggttgccaaaataagacctactctttatattagattaggtctaccatca
18904900
<---------
AHL20(1)
--------->
ARR11(3)
--------->
MYB46(3)
<---------
HSFC1(2)
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<----------
DOF2
--------->
HSFC1(2)
<---------
AHL20(2)
--------->
TOE1(2)
--------
<------
ZmHOX2a(1)
<---------
ICU4
--------->
ANAC58
--------->
ARR11(3)
<----------
DOF2
----------->
GT1
--------->
AHL20(1)
--------->
ANAC46
<---------
ARR11(3)
<
-------
GLK1(2)
----------->
GT1
<---------
ARR11(3)
--------->
ANAC58
--------->
GLK1(1)
-
aattctttttgcaaatagaaacaggaaaattctaacaacttaatattttctttaaaaacttatctcaagccaaaatccaacgatatctatcgatatggta
18905000
--------->
YAB1
--------->
MYB52(1)
<---------
ATHB12
<-----------
GT1
--------->
WOX13(1)
<---------
YAB1
<---------
YAB1
--->
GT1
<---------
TOE2(3)
----------->
GT1
--------->
AHL20(2)
---------
YAB1
<---------
YAB1
<---------
YAB1
------------>
CBF
--------->
ICU4
--------->
ARR14(2)
----------->
CBF
<------------
CBF
--------->
YAB1
--------->
ZAT6
<---------
ATHB51
<---------
GLK1(2)
ttatcaatcaaaagattaatattgcataaatgttttgataattttgttaacaatagaataagtgtgaaattatgaaattaactggattctaattctatcc
18905100
<---------
ZAT6
<---------
ANAC55(1)
--------->
YAB1
<---------
ANAC55(2)
<---------
ATHB51
<---------
ANAC46
---------->
DOF2
<----------
DOF2
--------->
PCF2
<---------
ATHB12
--------->
ANAC55(2)
<---------
ATHB12
<---------
AHL20(2)
--------->
WOX13(1)
<-------
GAMYB
--------->
At5g28300
--------->
AHL20(2)
<------
ZmHOX2a(2)
----------->
GT1
----------->
GT1
------->
TEIL
<---------
YAB1
------------>
CBF
-
cttgtaacttgggaagggtgttaagtgttaacacactcggtaaatcactcatggactttgaattttatatttgggcccataatggatcaatcgtaaaccc
18905200
--------->
At4g35610
--------->
ANAC58
------>
NtERF2
<---------------
AGL15
--------------->
AGL15
----------------->
AG
=========================================================================
----------------->
AGL1
<-----------------
AG
--------->
ATHB12
----------------->
AGL3
<---------
YAB1
<-----------------
AGL1
<---------
AHL20(2)
<-----------------
AGL3
--------->
YAB1
--------->
HSFB2a(1)
<-----------------
AGL2
<---------
AHL20(2)
<---------
HSFC1(2)
--
----------------->
AGL2
----------->
TBP
--------->
ATHB51
<---------
ARR14(2)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
HSFB2a(1)
--
<---------
AHL20(2)
<---------
AHL20(1)
--------->
HSFC1(2)
--
--------->
AHL20(2)
<---------
At4g35610
<---------
AHL20(2)
--------->
ARR14(2)
--------->
At4g35610
<-----------
GT1
--------->
AHL20(2)
<------------
CBF
<---------
ATHB12
<--
--------->
DOF2
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
<------
ZmHOX2a(2)
--
atcaaagaagctcaaaacatctaattttattccatttttggcacctcaaaatatataaacatttatattattgcgaaatttccgatc
atggattcgatac
18905300
<---------
ARR14(2)
----------------->
AGL1
----------------->
AGL2
<-----------------
AGL1
<-----------------
AG
--------->
AtMYB61
----------->
HVH21
--------->
ANAC58
--------->
DEAR3(2)
<---------
ARR14(2)
--------->
ANAC46
=========================
MADS_MADS
<---------
CCA1(2)
--------->
ANAC58
------->
ANAC55(1)
--------->
ARR14(2)
<<<<<<<<<
TBF1
<------
ZmHOX2a(2)
------->
ANAC58
--------->
MYB52(1)
<<<<<<<<<
TBF1
--------->
AGP1
------>
NtERF2
<-
------->
ANAC46
<---------
ARR14(2)
<---------
ARR11(3)
--------->
At4g35610
---------->
DOF2
-------
LBD16
--------->
ARR14(2)
--------->
ARR14(2)
<<<<<<<<<
TBF1
<------
ZmHOX2a(2)
----------->
RAV1(1)
------->
ANAC58
----------------->
AGL1
--------->
ARR11(3)
<-----------
HVH21
--------->
MYB46(3)
cacggaagcgacccaaatcggaaaccagaacgggcagaacccctaaatcttcttcttcttcttctccgatcagatcaatgctcgagccaccacaaagctt
18905400
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
---------->
ID1
<---------
AtLEC2
<---------
TOE1(3)
<---------
TOE2(3)
--------->
ANAC46
<---------
ANAC58
--------->
ZAT6
<---------
ANAC58
<--------
--------->
ARR11(3)
<---------
ANAC46
<----------
DOF2
---------
----------
GT1
<---------
ARR11(3)
<---------
YAB1
<---------
REM1(1)
------>
ZmHOX2a(1)
atttccttccaagggagagttcttcacactattgaaggttttgcttgtcgcttgtgctgtagcttttacctgcaatttcctctctaagtctctgagctca
18905500
--------->
ANAC58
--------->
ANAC58
==============================
bZIP_DOF
<---------
YAB1
--------->
ARR11(3)
--------->
TOE1(3)
--------->
At4g35610
<---------
YAB1
<---------
ARR11(3)
--------->
TOE2(3)
<--------
P
<----------
DOF2
<---------
CCA1(2)
<----------
DOF2
===========================================
bZIP_DOF
--
-
At4g35610
----------->
GT1
<---------
TGA1a
--------->
TOE2(3)
<-
>
At4g35610
--------->
YAB1
===============
MYC_MYB
--------->
ANAC46
--------->
YAB1
aacccttctaaatctttctgcgatagtaactttaatcccatcgattcagacttgg
gtaagctcgaaactcatactcaattcctttatatcatagttgaat
18905600
<---------
ATHB12
--------->
WOX13(1)
<---------
TOE1(2)
<---------
ANAC46
<---------
CCA1(1)
<-----------
ARR10
<---------
ANAC58
<---------
RVE1(1)
--------->
MYB52(1)
<---------
ANAC58
<---------
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
ATHB12
------->
ANAC55(2)
<---------
YAB1
<---------------
AGL15
--------
ANAC55(2)
<---------
AHL20(2)
------->
TEIL
<---------
AHL20(2)
-
tatgtaattccttggattaatcaatttcattgtttcag
atatttgtgaaccttgtccaattaatggagaatgttaccaagggaagttgcaatgtaatctt
18905700
------->
TEIL
<-
<---------
ATHB12
<---
<---------
ATHB12
-----
--------->
REM1(2)
--------->
WOX13(1)
---------->
DOF2
<----
---------->
DOF2
----------->
GT1
<---------
AHL20(2)
<----
-------->
CCA1(2)
<---------
ANAC46
--------->
GLK1(1)
--------->
ARR11(3)
<----------
ID1
<----------
DOF2
ggatacaaaaatcaaaggaatttatgtgtagaagatggagaaatcaatgaatcaactaagaaattg
gtattgaattatgcgaaaaatcggaacttttaga
18905800
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AGI:
At5g46560.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO63458.1); contains domain EGF/Laminin (SSF57196)
Range:
from: 18905288
to: 18907689
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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