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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                      <----------DOF2
        --------->ANAC55(2)                                         --------------->AGL15
        <---------ANAC55(2)                                       -------->P
      --------->AHL20(2)                                          ------>MYB46(1)
   <---------ICU4                                             <---------ARR11(3)
  <---------YAB1                                    ================================MADS_MADS
 <---------ARR11(3)                           --------->MYB59 --------->ARR11(3)
 --------->ARR11(3) ----------->GT1           <---------TOE2(3)   ------>MYB83
------->DOF2   <---------RVE1(1)              <---------TOE1(3) <---------MYB59
---->AHL20(2)  <---------CCA1(1)     --------->YAB1 ----------------->AGL1             <---------ETT(2)
-----AHL20(2) <---------ARR11(3)    <---------YAB1  ----------------->AGL3          <------MYB83 <--
>AHL20(2)     --------->ARR11(3)   --------->ARR11(3)<---------------AGL15          <------MYB46(1)
-AHL20(2)     <---------AHL20(1)   <---------ARR11(3)--------------->AGL15         --------->MYB59
 
aaaagataattacataagatatttggataatttcgaaatatcatatttttaggttgccaaaataagacctactctttatattagattaggtctaccatca  18904900
                                        <---------AHL20(1)
                                        --------->ARR11(3)
                               --------->MYB46(3)
                       <---------HSFC1(2)
                       --------->HSFB2a(1)
                       <---------HSFB2a(1)    <----------DOF2
                       --------->HSFC1(2)  <---------AHL20(2)            --------->TOE1(2)  --------
                    <------ZmHOX2a(1)   <---------ICU4         --------->ANAC58 --------->ARR11(3)
 <----------DOF2   ----------->GT1      --------->AHL20(1)     --------->ANAC46 <---------ARR11(3) <
-------GLK1(2)    ----------->GT1       <---------ARR11(3)     --------->ANAC58--------->GLK1(1)   -
 
aattctttttgcaaatagaaacaggaaaattctaacaacttaatattttctttaaaaacttatctcaagccaaaatccaacgatatctatcgatatggta  18905000
    --------->YAB1                                                         --------->MYB52(1)
   <---------ATHB12                                                        <-----------GT1
 --------->WOX13(1)                                                 <---------YAB1   <---------YAB1
--->GT1       <---------TOE2(3)                           ----------->GT1 --------->AHL20(2)
---------YAB1 <---------YAB1   <---------YAB1------------>CBF    --------->ICU4  --------->ARR14(2)
----------->CBF <------------CBF--------->YAB1--------->ZAT6     <---------ATHB51<---------GLK1(2)
 
ttatcaatcaaaagattaatattgcataaatgttttgataattttgttaacaatagaataagtgtgaaattatgaaattaactggattctaattctatcc  18905100
                     <---------ZAT6
                   <---------ANAC55(1)                                                 --------->YAB1
                   <---------ANAC55(2)                                     <---------ATHB51
                   <---------ANAC46  ---------->DOF2<----------DOF2   --------->PCF2  <---------ATHB12
                   --------->ANAC55(2)      <---------ATHB12<---------AHL20(2)      --------->WOX13(1)
               <-------GAMYB       --------->At5g28300     --------->AHL20(2)     <------ZmHOX2a(2)
            ----------->GT1       ----------->GT1 ------->TEIL <---------YAB1     ------------>CBF -
 
cttgtaacttgggaagggtgttaagtgttaacacactcggtaaatcactcatggactttgaattttatatttgggcccataatggatcaatcgtaaaccc  18905200
                                       --------->At4g35610
                                       --------->ANAC58
                                      ------>NtERF2
                            <---------------AGL15
                            --------------->AGL15
                           ----------------->AG
                           =========================================================================
                           ----------------->AGL1
                           <-----------------AG                 --------->ATHB12
                           ----------------->AGL3              <---------YAB1
                           <-----------------AGL1              <---------AHL20(2)
                           <-----------------AGL3          --------->YAB1--------->HSFB2a(1)
                           <-----------------AGL2  <---------AHL20(2)    <---------HSFC1(2)       --
                           ----------------->AGL2----------->TBP--------->ATHB51       <---------ARR14(2)
                      --------->AHL20(2)        --------->AHL20(1)       <---------HSFB2a(1)      --
                      <---------AHL20(2)        <---------AHL20(1)       --------->HSFC1(2)       --
                     --------->AHL20(2)<---------At4g35610 <---------AHL20(2)          --------->ARR14(2)
     --------->At4g35610 <-----------GT1       --------->AHL20(2)<------------CBF<---------ATHB12<--
--------->DOF2       <---------AHL20(2)--------->ANAC58    --------->AHL20(2)    <------ZmHOX2a(2)--
 
atcaaagaagctcaaaacatctaattttattccatttttggcacctcaaaatatataaacatttatattattgcgaaatttccgatcatggattcgatac  18905300
            <---------ARR14(2)
       ----------------->AGL1
       ----------------->AGL2
       <-----------------AGL1
       <-----------------AG                                                           --------->AtMYB61
    ----------->HVH21                                                           --------->ANAC58
   --------->DEAR3(2)            <---------ARR14(2)                             --------->ANAC46
=========================MADS_MADS       <---------CCA1(2)                      --------->ANAC58
------->ANAC55(1)       --------->ARR14(2)             <<<<<<<<<TBF1  <------ZmHOX2a(2)
------->ANAC58          --------->MYB52(1)       <<<<<<<<<TBF1       --------->AGP1 ------>NtERF2 <-
------->ANAC46          <---------ARR14(2)<---------ARR11(3)        --------->At4g35610  ---------->DOF2
-------LBD16--------->ARR14(2)   --------->ARR14(2) <<<<<<<<<TBF1<------ZmHOX2a(2)  ----------->RAV1(1)
------->ANAC58      ----------------->AGL1--------->ARR11(3)    <-----------HVH21 --------->MYB46(3)
 
cacggaagcgacccaaatcggaaaccagaacgggcagaacccctaaatcttcttcttcttcttctccgatcagatcaatgctcgagccaccacaaagctt  18905400
                                              <---------ANAC58
                                              <---------ANAC46
                                              <---------ANAC58
                                           ---------->ID1
                                       <---------AtLEC2
                               <---------TOE1(3)
                               <---------TOE2(3)
                      --------->ANAC46 <---------ANAC58
                      --------->ZAT6   <---------ANAC58                                    <--------
               --------->ARR11(3)      <---------ANAC46    <----------DOF2                 ---------
----------GT1  <---------ARR11(3)    <---------YAB1  <---------REM1(1)      ------>ZmHOX2a(1)
 
atttccttccaagggagagttcttcacactattgaaggttttgcttgtcgcttgtgctgtagcttttacctgcaatttcctctctaagtctctgagctca  18905500
                                                          --------->ANAC58
                                                          --------->ANAC58
                          ==============================bZIP_DOF                       <---------YAB1
       --------->ARR11(3) --------->TOE1(3)            --------->At4g35610          <---------YAB1
       <---------ARR11(3) --------->TOE2(3)         <--------P                <----------DOF2
      <---------CCA1(2)   <----------DOF2     ===========================================bZIP_DOF --
-At4g35610          ----------->GT1           <---------TGA1a                --------->TOE2(3)    <-
>At4g35610          --------->YAB1            ===============MYC_MYB --------->ANAC46--------->YAB1
 
aacccttctaaatctttctgcgatagtaactttaatcccatcgattcagacttgggtaagctcgaaactcatactcaattcctttatatcatagttgaat  18905600
                <---------ATHB12
              --------->WOX13(1)
        <---------TOE1(2)
      <---------ANAC46             <---------CCA1(1)             <-----------ARR10
      <---------ANAC58             <---------RVE1(1)     --------->MYB52(1)
      <---------ANAC58            <---------ARR11(3)    --------->AHL20(2)
<---------AHL20(2)                --------->ARR11(3)   <---------ATHB12
------->ANAC55(2)     <---------YAB1                 <---------------AGL15
--------ANAC55(2)     <---------AHL20(2)    ------->TEIL<---------AHL20(2)                         -
 
tatgtaattccttggattaatcaatttcattgtttcagatatttgtgaaccttgtccaattaatggagaatgttaccaagggaagttgcaatgtaatctt  18905700
                                              ------->TEIL                                        <-
                                           <---------ATHB12                                     <---
                                       <---------ATHB12                                        -----
                       --------->REM1(2) --------->WOX13(1)                    ---------->DOF2 <----
         ---------->DOF2        ----------->GT1                    <---------AHL20(2)          <----
-------->CCA1(2)    <---------ANAC46 --------->GLK1(1)  --------->ARR11(3) <----------ID1<----------DOF2
 
ggatacaaaaatcaaaggaatttatgtgtagaagatggagaaatcaatgaatcaactaagaaattggtattgaattatgcgaaaaatcggaacttttaga  18905800
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AGI:  At5g46560.1   
Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO63458.1); contains domain EGF/Laminin (SSF57196)
Range:  from: 18905288    to: 18907689    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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