Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->HSFB2a(2)    --------->ARR11(3)    <---------ARR14(2)  <---------ZAT18   <---------CCA1(2)    <---------ZAT14 --------->YAB1         --------->ZAT14  <---------ARR11(3)                               <-------GAMYB ---------ATHB12      --------->ANAC46   --------->ARR11(3)                              <-----------RAV1(1) --->MYB46(1)       --------->ZAT6      <---------CCA1(2)       ----------->GT1     <---------ANAC58 --->MYB83        <-----------GT1<---------TOE2(3)          --------->ARR11(3)      <---------ANAC58 -----MYB59     --------->AHL20(2)----------->GT1    >>>>>>>>>>GT-3b         ----------->HVH21 >ZAT18<---------HSFB2a(2)       --------->MYB59  ----------->GT1            <---------ZAT6    <-----   aaatcatatctagaaagattaaacactacacttgtaaggtatatatcttgggaagaaaaatagatgttgtgatatcgtagtgacaggcttgctgttgcat  18852400      <--------P                                                                                  <--     <-------GAMYB                                                                                <--    <------MYB83                                                                                  ---    <------MYB46(1)                                                                               ---    <---------MYB46(3)                                                                            <--    --------->MYB55(2)                                                                            <--    --------->MYB52(2)                                      --------->At5g28300       <---------ANAC46   <---------AtMYB61                                <-----------HVH21               --------->ALFIN1  <--------P                        <---------TOE2(3)   <---------ALFIN1   ------>ZmHOX2a(2)      <-- <-------GAMYB         ----------->GT1           <---------GLK1(2)       <---------ARR11(3)       <-- -----DOF2 <---------ZAT14---------->DOF2      <---------YAB1            --------->ARR11(3)<---------ZAT2   ttgggttggttagtatagttgaaggaagtaaagtcactatggttttttgaagattgtcacacagtgattaagtctgatcttaagagttgtgggaactggg  18852500 -------ANAC58 -------O2                                                       <------------CBF ------>O2                                                      --------->ATHB12 ------>TGA1a                     <---------ICU4               <---------YAB1 -------ANAC55(2)                <---------YAB1               <-------GAMYB -------ANAC58     <-------TEIL--------->YAB1           <---------ANAC58              =============== -------TGA1a     --------->CCA1(2)                     <---------ANAC58   <------ZmHOX2a(1) -------ANAC46   --------->ARR11(1)      <---------TOE2(3)   <---------MYB46(3)       ---------->DOF2   acgtgagattgttttaagagattcgacttggtttcatcattttaagaatgggattttttcttgtggttattggtagaggagtacttgagaaagttgcaaa  18852600                                                                    --------->DAG2                                                                   ---------->DOF2                                                             <---------MYB46(3)                                                            <---------DEAR3(1)                                                            <---------AtMYB61                <------ZmHOX2a(1)                         <---------ANAC46          <---------TGA1a                                <---------AtMYB61                     ------          <---------bZIP60(1)                          <---------ANAC46                     <------ZmHOX2a(1)          <---------ANAC46                             <---------ANAC58                     ---------          --------->bZIP60(1)                          <---------ANAC58 <-----------GT1   --------->ALFIN1   <---------ANAC46                         <------------CBF--------->ALFIN1 <------ZmHOX2a(2) <-----   <---------ANAC58                       <---------YAB1 --------->ALFIN1    ======================HOX2a_HOX2a   <---------ANAC58                 <---------YAB1     <-----------RAV1(1)  --------->ARR14(2) <----- ===================bZIP_DOF        ----------->TBP<-------GAMYB<---------MYB46(3)   ---------->DOF2   gtttgacttgtgatgtgaggataagagggtaagagactataaatgtgattgtgagttgtgtggtggtggtaaagtcacgatccattccaaaggaggagcc  18852700                                          <---------ANAC58             ----------->TBP <-----------HVH21                        <---------ANAC58    --------->At4g35610                 <-- --->HSFB2a(1)              <---------ALFIN1         <----------DOF2 <---------AHL20(2)      ------>ZmHOX2a(1) >ATERF1(1)                 --------------->AGL15 <---------ALFIN1   --------->AHL20(2)      <------- ----HSFC1(2)              --------->MYB46(3)  <-----------GT1<---------At4g35610   <-----------GT1 ----HSFB2a(1) ---------->DOF2        <------------CBF     <---------At4g35610     <---------ATHB12   ttctgtcaagttggcagaaaagtctgagaaccacttgtggaattgctagtcaccactttgcctctgctaaattatatatgggcaaatcacttctcctctg  18852800           <---------ARR14(2)           --------->ARR14(2)         --------->LBD16        --------->HSFC1(1)                                       --------->ANAC58        <---------HSFB2a(2)                                      --------->ANAC46        --------->HSFB2a(2)    ------>ZmHOX2a(1)                 --------->ANAC58        <---------HSFC1(1) <-----------GT1                 ------>ZmHOX2a(1)       <---------LBD16>>>>>>>>>ARR2           <----------DOF2   --------->HSFB2a(2)     <-----------GT1  >>>>>>>>>ARR1          <---------ANAC58   <---------HSFB2a(2)  <---------AHL20(2)  <------------CBF       <---------ANAC58 <XXXXXXXXXXXXXXXXXXXXMIR824   --------- -------RVE1(1)     <---------YAB1------>ZmHOX2a(1)  ---------->ID1          <---------At4g35610  <-- --At4g35610        <---------TOE2(3) <---------MYB52(1)------>ZmHOX2a(1)<-----------HVH21  ---------   atatttttttccagaaacgtctaagattgtttcctcctctgttaatggcttcttcgtcctcctcttctcgcaattggtcatatgatgttttcccaagctt  18852900                                                               <---------ICU4              --------->LBD16                                  --------->YAB1             --------->ANAC58                                  <--------HAHB4             --------->ANAC46                --------->ZAT2   <---------ATHB12             --------->ANAC58          <---------LBD16  --------->GLK1(1)            <---------LBD16       <----------DOF2   --------->ANAC58        --------->ARR11(3)        <---------DAG2    --------->ANAC58 --------->ZAT14               <---------ALFIN1<---------------AtSPL3 >ANAC58<-----------ARR10--------->TOE2(3)   <---------At4g35610         ---------->DOF2            < -------ANAC46<------NtERF2 --------->ANAC46 --------->At4g35610     <----------DOF2          ------- >ANAC58<---------ARR11(3)------>ZmHOX2a(1)  <---------ZAT2   <------ZmHOX2a(2)               -------   cagtggagaagatgtccgcaaaacattcctcagccactttctcagggagctggaacggaaatcgatcattactttcaaagacaatgagatggagagaagc  18853000                                             <---------ZAT14                                       <---------TOE2(3)                          <---------ZAT2               <---------ANAC58     <-------TEIL                                  --------->ZAT2               <---------ANAC58<---------TOE2(3)  --------->ATHB12      ------>NtERF2               < ---------ATHB12  --------->REM1(2)--------->CCA1(2)                   --------->ANAC46           --- -->ANAC58 --------->LBD16    ---------->DOF2--------->ZAT14           --------->ANAC58           <-- -->ANAC58<---------ALFIN1   --------->AHL20(2)  --------->ICU4        --------->ANAC58<---------ANAC46   cagtcaatagccccagagcttgtagaggcgattaaagattcaaggattgcagtgattgtgttctctaaaaactacgcctcttcaagctggtgtctaaatg  18853100                                                                                 --------->HSFB2a(2)                                                                               <---------LBD16                                                                      ------>ZmHOX2a(1)                                                                    ------>ZmHOX2a(2)                                     <---------ZAT2                 <---------HSFB2a(1)                                     <------NtERF2                  --------->HSFC1(2)                                    --------->ANAC58                <---------HSFC1(2) <-----------HVH21                  --------->ANAC58                --------->HSFB2a(1) ---------MYB46(3)    --------->MYB46(3)                           <------ZmHOX2a(2) ------>At4g35610   ----------->RAV1(1)                           --------->ARR14(2) -------At4g35610--------->AtLEC2  --------->ATERF1(2)            <---------ARR14(2)        <------NtERF2   agctgttagagattatgcgatgcaacaaatatttgggccagcaagtgataccagtcttctactatttggatccttctcatcttcggaaacagtcgggaga  18853200                                                                          <---------TOE2(3)                                          ----------->GT1              <---------WOX13(1)                                 ------>MYB83                        <---------WRKY18(1)        <----                         <---------HSFB2a(2)                        --------->WRKY12           <-----                         --------->HSFB2a(2)----------->GT1         --------->WRKY45          <------                    <---------ANAC58    <------ZmHOX2a(1)           --------->WRKY38(1)       -------                    <---------ANAC58  <---------TOE2(3)            --------->DOF5.7(2)       <-------               ---------->DOF2   ------>MYB46(1)           --------->ANAC58                  --------            --------->AHL20(2)   --------->MYB52(1)        --------->ANAC58              <---------LBD16            <---------AHL20(2) <---------MYB59      --------->ATHB12----------->HVH21    ------>ZmHOX2a(1)   gtttggagaggcatttaaaaagacttgccagaaccaaactgaggaagtgaaaaatcagtggaagcaagcgttgactgatgtttcaaacatcctcggatat  18853300  Previous    Next  AGI:  At5g46440.1    Description:  similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G46460.1) Range:  from: 18851870    to: 18852380    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g46450.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G08450.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46470.1); similar to ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT5G46270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49904.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR0001 Range:  from: 18852845    to: 18856773    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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