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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
--------->
ARR11(3)
--------->
ANAC58
--------->
At4g35610
<-----------------
AG
<---------
At4g35610
<-----------------
AGL1
--------->
GLK1(2)
<------
ZmHOX2a(2)
---------->
GT1
<---------
ARR14(2)
<----------
DOF2
<---------
At4g35610
-----
DOF2
--------->
ARR14(2)
<---------
ANAC58
<-----------
HVH21
--------->
ANAC58
----
DAG2
<---------
GLK1(2)
<---------
ANAC58
---------->
DOF2
---------->
DOF2
<-----
--
At4g35610
<-----------
GT1
<---------
ARR11(3)
<--------
P
--------->
At4g35610
<---------
tttggtaaaatttgtttcgattctgctaaatatcattttgctttggacctggttagaaaagtcagatcaaatttggaaagaaatacaaattagtgagtac
18660600
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(1)
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
ANAC55(2)
--------->
YAB1
--------->
ICU4
<-----------
GT1
<---------
AHL20(2)
<------
MYB46(1)
--
TEIL
<---------
AHL20(2)
<---------
ANAC55(2)
--------->
AHL20(2)
<------
MYB83
------
AtSPL8
--------->
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
<------
ZmHOX2a(1)
atgtaataataaaatttaactattttcaatacatgattttaatatttgtatttatttaagaagattataattcaattgtttcagtgaggagttgtttggt
18660700
<------
MYB46(1)
--------->
CCA1(2)
<------
MYB83
<---------
YAB1
<---------
AHL20(2)
<-
--------->
YAB1
--------->
AHL20(2)
-------
<---------
AHL20(2)
<----------
DOF2
-------
--------->
AHL20(2)
<---------
ARR11(3)
-------
<---------
YAB1
--------->
ANAC46
--------->
MYB59
<---------
YAB1
<-----------
GT1
---------
ttactcggtttattatatatgatgatatacaaaaccagttctttaatttggtatttgtttcagtatgtttgcttcaaatttccttcccttacgaataagc
18660800
<---------
YAB1
-------->
HAHB4
--------->
ICU4
<---------
YAB1
<---------
ICU4
-------->
HAHB4
--------->
YAB1
--------->
ICU4
--------->
AtMYB61
<---------
ATHB51
<---------
ALFIN1
<---------
ATHB12
--------->
YAB1
------>
MYB83
--------->
YAB1
---------->
DOF2
<---------
ICU4
------>
MYB46(1)
--------
MYB52(2)
<---------
REM1(1)
--------->
ICU4
--------->
HSFC1(2)
-->
ANAC58
--------->
YAB1
--------->
YAB1
--------->
HSFB2a(1)
-->
ANAC46
<---------
ATHB12
<---------
ATHB12
---------->
DOF2
<---------
HSFC1(2)
-->
ANAC58
--------->
WOX13(1)
------>
ZmHOX2a(1)
<---------
YAB1
<---------
HSFB2a(1)
->
DOF2
--------->
YAB1
------>
ZmHOX2a(1)
--------->
YAB1
------->
TEIL
aactaataatgatcaatgaaagttgtaacagagacatcctccttaccaataaacaactataatcatcacaaaagcttcttaagaaccttccaccacttct
18660900
*
TSS
<----------
ID1
---------->
DOF2
---------->
DOF2
--------->
AHL20(2)
--------->
ANAC58
--------->
YAB1
--------->
ARR11(3)
---------->
DOF2
--------->
YAB1
--------->
AHL20(2)
--------->
ANAC58
--------->
At4g35610
<-------
TEIL
<---------
AHL20(2)
---------->
DOF2
<
cttctcttctgaacataaaacccaaacacattcacaaaattcataaacataaaaaaataa
aagaaattgaagacaaaagcaaagaaa
atgagcacagcaa
18661000
--------->
ALFIN1
<------
NtERF2
<----------
DOF2
--------->
ETT(1)
--------->
SPL7
<---------
ANAC46
------>
ZmHOX2a(1)
<-----------
HVH21
--------->
ANAC55(2)
--------->
AHL20(2)
<-----------
RAV1(1)
---------->
DOF2
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
ALFIN1
<---------
ZAT14
--------->
ANAC46
--------->
DOF5.7(2)
<---------
ANAC55(1)
--------->
ALFIN1
--------->
ANAC58
--------->
At5g28300
-------
TEIL
----------->
HVH21
<---------
At4g35610
--------->
ANAC58
----------->
GT1
gattcattaagtgtgtgactgtcggagatggagcagtgggaaagacttgtatgctcatttcatataccagcaatacgtttcctacg
gtaacttttaattt
18661100
<----------
DOF2
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
AGP1
--------->
At4g35610
----------->
RAV1(2)
--------->
MYB59
<---------
ARR11(3)
<---------
TOE2(3)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
RVE1(1)
--------->
ARR11(3)
--------->
AHL20(1)
<---------
CCA1(1)
----------->
ARR10
<---------
AHL20(1)
<---------
AHL20(1)
------>
ZmHOX2a(1)
--------->
CCA1(2)
<---------
ARR11(3)
=============
HOX2a_HOX2a
--------->
ARR14(2)
--------->
ARR11(3)
--------->
LBD16
<---------
ARR11(3)
<---------
TOE2(3)
<---------
At4g35610
<-----
--------->
LBD16
<---------
TOE2(3)
<---------
YAB1
--------->
GLK1(1)
<---------
TOE2(3)
cttagcaaacttgatatatatccagatatattttcaaattgatgttttaagatatttatgttaggctcctgagatctttgctcattttaaacgttgttca
18661200
--------->
TOE1(3)
<---------
ANAC46
----------->
GT1
<---------
TOE2(3)
<---------
DOF5.7(2)
--------->
DOF5.7(2)
--------->
TOE2(3)
--------->
YAB1
----
--------->
ARR14(2)
<--------
HAHB4
<---
<---------
ARR14(2)
-------->
ATHB1
-------
<---------
GLK1(1)
--------->
ATHB12
>>>>>>>>>
RAP2.2
<---------
CCA1(2)
<---------
ICU4
<---------
ARR11(3)
<---------
ANAC58
--------->
ICU4
<---------
CCA1(2)
<---------
AHL20(2)
<---------
ANAC58
------>
ZmHOX2a(1)
<---------
ARR11(3)
--------->
AHL20(2)
<---------
ANAC46
<---------
HSFB2a(2)
--------->
ARR11(3)
--------->
AHL20(2)
<----------
DOF2
----------------->
AG
--------->
HSFB2a(2)
--------->
AHL20(1)
----
AtLEC2
<-------
TEIL
<-----------
GT1
--------->
YAB1
--------->
YAB1
<---------
AHL20(1)
tggcaaattaataagagcctagtttcatcttttgcgtttatatttccatatccgtttaagcatatttttcctagaatcattaacgtgaaatatatctaaa
18661300
<-----------
GT1
----->
At4g35610
<-----------
GT1
------->
TEIL
--------->
ATHB12
------
At4g35610
<---------
HSFB2a(2)
<---------
TOE2(3)
--------->
AHL20(2)
--->
DOF2
--------->
HSFB2a(2)
----------->
GT1
<---------
AHL20(2)
<-
gctgaattcaaacccatgcttctggatttttgctatctgtttacttaagaaacatggtttaatgtatgttttttgatatataaatgatttaactatctaa
18661400
<-
<--
------
<---------
LBD16
------
<---------
ETT(2)
<--------
<---------
WRKY38(1)
---------
<---------
WRKY12
<--------
--------->
ETT(2)
--------->
ALFIN1
-------
<---------
DEAR3(1)
<---------
ANAC58
<--------
----------->
HVH21
<---------
ANAC58
<---------
DEAR3(2)
<---------
MYB46(3)
------->
TEIL
<---------
ATERF1(2)
<---------
AtMYB61
--------->
LBD16
--------->
ATERF1(2)
--------->
ALFIN1
<---------
ANAC58
<---------
LBD16
<-----------
RAV1(1)
<---------
ANAC58
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
At4g35610
<---------
ANAC46
<---------
ARR14(2)
----------
GT1
----------->
RAV1(1)
<---------
At4g35610
<---------
SPL7
<---------
ANAC46
<---------
RAP2.6(3)
tttacag
gattatgttccaacagttttcgacaacttcagcgcaaatgtggtggtcgacgggagtaccgtgaaccttggcctgtgggatactgccg
gtacg
18661500
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AGI:
At5g45970.1
Description:
ARAC2 (RHO-RELATED PROTEIN FROM PLANTS 7); GTP binding. Identical to Rac-like GTP-binding protein ARAC2 precursor (ARAC2) [Arabidopsis Thaliana] (GB:Q38903); similar to ARAC11/ATRAC11/ATROP1/ROP1/ROP1AT (RHO-RELATED PROTEIN FROM PLANTS 1), GTP binding / GTPase/ protein binding [Arabidopsis thaliana] (TAIR:AT3G51300.1); similar to Rac-like GTP-binding protein RAC9 precursor (GB:Q41254); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rho type; (InterPro:IPR003578)
Range:
from: 18660961
to: 18663193
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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