AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                --------->At4g35610     <---------MYB46(3)                  ----------->HVH21
         <---------ALFIN1              <---------ANAC46                 <------MYB46(1)
        <---------ZAT18  --------->MYB52(1)      <-----------GT1        <------MYB83
      --------->ANAC46 <---------MYB52(2)<-------GAMYB                 --------->MYB59
---HSFC1(1)     --------->ZAT2         <---------ANAC58            --------->ATHB12
---HSFB2a(2)    <---------At4g35610    <---------ANAC58           <---------YAB1
-->HSFB2a(2)    <---------ZAT2        <---------LBD16           <----------DOF2                    <
 
aactcacttactccacttgagctgcaattaacagagaaacttgcggttgaagaaaccatttccatagctttgattaggtctgactcttcgactaggtttt  18618400
                                                 --------->HSFC1(2)
                                                 <---------MYB46(3)
                        ---------->ID1           <---------HSFB2a(1)
                  --------->ALFIN1               --------->HSFB2a(1)
              <---------HSFB2a(2)           <---------TOE2(3)
          <----------DOF2                  --------->MYB52(1)
         <---------ANAC58                 ----------->TGA1                                   -------
         <---------ANAC58                 ----------->HVH21                          <---------ICU4
    ------>ZmHOX2a(1) --------->MYB52(2) <---------MYB52(2)      --------->ANAC58    -------->HAHB4
    <----------DOF2   <---------MYB46(3) --------->DEAR3(2)      --------->ANAC58   --------->ICU4
<-----------GT1--------->LBD16          --------->At4g35610      --------->ANAC46 --------->YAB1
-----------GT1<-----------RAV1(2) ---------->DOF2<---------HSFC1(2)            ----------->GT1  <---
 
ttttatcctttggctttccaggtgtttgttcccatttgaaaggaactgacgatggttccattacatgctcgaaactctggtcttgtaataatcgaatcag  18618500
                       ------->TEIL           ---------->ID1                            --------->YAB1
-->YAB1      <---------ANAC58           ------>ZmHOX2a(1)                              <------ZmHOX2a(2)
------GLK1(2)<---------ANAC58  <---------GLK1(1)<-----------TGA1                 <---------MYB52(1)
 
aatttcattctctgtttcttgacatgaatctttgatttctctccttctcgtcgtcatcgtcttcttcttggtgttctctgattcgtttggatcatcaggt  18618600
                  --------->ARR14(2)
                  <---------ARR14(2)
               --------->ANAC58
               --------->ANAC58
              <---------LBD16
             --------->MYB52(1)                                            --------->ARR11(3)     --
            ----------->HVH21    <-----------------AGL3            <---------YAB1                 --
        --------->ANAC58         ----------------->AGL3          <---------At4g35610  <---------ARR11(3)
        --------->ANAC58        --------->At4g35610            <---------ANAC58------>ZmHOX2a(1)  --
     <---------GLK1(1)         --------->GLK1(2)               <---------ANAC58<----------DOF2<-----
     --------->GLK1(1)<------ZmHOX2a(1)              ------>ZmHOX2a(1)     <---------ARR11(3)<------
 
ttagtcggaactcgcctcacggataggaatggagcatctaaatttagtttcttctcctccatttttgcttctgataaaaatcctttcaagaactctcttt  18618700
      --------->AHL20(2)
------->ANAC46             <-----------HVH21       ----------->GT1
------->ANAC58    ---------->DOF2           ----------->GT1
------->ANAC58 <----------DOF2          ---------->DOF2                 ---------->DOF2
------HVH21    --------->TOE2(3)      <---------YAB1                --------->GLK1(2)           *TSS
----DOF2       --------->TOE1(3)      <---------TOE2(3)       ---------->DOF2             <XXXXXXXXX
 
caccccaaaaaaaataaactttaaagaaggtgtcaagaattaagaaagtgtaaaatgtataaatgaaaaggaatctaaagagttagtgatgttttctgtt  18618800
                                                                 ---------->DOF2
                                  <---------AHL20(2)            <---------AHL20(2)  <------ZmHOX2a(1)
           ------------>CBF--------->ZAT6        --------->AHL20(2)   --------->GLK1(2)          ---
 <----------DOF2--------->YAB1   --------->AHL20(2)   ---------->DOF2<---------GLK1(2) ----------->GT1
XXXXXXXXXXXMIR415        <-----------GT1  ------------------------>ANAC81   --------------------->WRI1
 
tctgctttgctatatacaatcagagaaataacaccatttattagaaaacaaaaaaaataaagacgatttaaagaatctacatagggaggaccgaaaaatg  18618900
                                                                                <---------YAB1
                                                                              --------->YAB1
                                                                              <---------ICU4
                                                                             --------->ICU4
                                                                    --------->ARR11(3)
                          --------->DAG2                          ----------->GT1
                         ---------->DOF2                        ---------->DOF2 <---------TOE1(3)
                     --------->AHL20(2)                     --------->At5g28300 <---------TOE2(3)
                    <---------ATHB12                       ----------->GT1   <---------ATHB12
                    --------->AHL20(2)--------->YAB1 --------->ATHB51        <---------ATHB51  -----
---->TEIL     --------->WOX13(1)      ----------->GT1<---------ICU4 <---------ARR11(3)<---------YAB1
 
aatgttaggggaagagtcagtcaataaataaagtgtctcaatggtaaaatttagaattatcgcagtaaaaagataattcaattatggttttgataaaaaa  18619000
            --------->ANAC58
            --------->ANAC58          <---------AHL20(2)
          --------->MYB52(1)         <---------AHL20(2)
       --------->ANAC58              --------->AHL20(2)                                           <-
       --------->ANAC58              <---------AHL20(1)              --------->YAB1            -----
       --------->ANAC46              --------->AHL20(1)              --------->AHL20(2)       ------
      --------->SPL7             <---------AHL20(2)            --------->YAB1               --------
    <---------SPL7               --------->AHL20(2)     ---------->DOF2                  --------->YAB1
   <---------MYB46(3)         ----------->GT1         --------->AHL20(2)                --------->AHL20(2)
  <---------------AtSPL3      --------->YAB1          <---------AHL20(2)      ----------->GT1 <-----
  <---------------AtSPL8     --------->ICU4    <---------AHL20(2) --------->YAB1      --------->TOE2(3)
---->AHL20(2) ---------->DOF2----------->GT1   --------->AHL20(2) ----------->GT1    <---------ICU4-
 
aaatggtggtacgaaacgaaagaatggatggaatgataaatttattcaaattaaaaattaaaagaagaataataaaaaatagggataaacattaaaaata  18619100
           --------->CCA1(2)
     --------->YAB1
     -------->HAHB4
    <---------YAB1
  --------->YAB1
  <---------ICU4
 <---------YAB1
 --------->ICU4                                        <---------ARR11(3)
--------AHL20(2)                                  <-------TEIL
---->AHL20(2)             <-----------GT1     <---------------AtSPL8
--->AHL20(2)         <----------DOF2         <---------ANAC46
->YAB1    --------->ARR11(3)         <<<<<<<<<<<<<<<<<LFY                                       <---
----AHL20(2)        <---------DAG2<---------HSFB2a(2)  --------->ARR11(3)               <---------YAB1
-------->YAB1    <-----------GT1  --------->HSFB2a(2)  <---------GLK1(2)      <----------DOF2 <-----
 
aataataataatagatatagtcacctttcttactgtttcagaacaatggggggtacaagatttttgtttgagaaaatatgactttcgaatttcgatagga  18619200
                                                                     --------->AHL20(1)
                                                                     <---------AHL20(1)
                                                                     <---------AHL20(2)
                                                                     --------->AHL20(2)
                                                                 --------->AHL20(2)
                                                                 <---------AHL20(2)
                                                              <---------ICU4
                                                             --------->ICU4
                           <---------TOE2(3)                 <---------YAB1
                      <---------MYB52(1)                   <---------ICU4
            <-----------RAV1(1)               --------->MYB46(3)<---------YAB1         <---------AHL20(2)
         <-----------RAV1(1)            <---------ANAC46  <---------YAB1        <---------ZAT6
      <----------DOF2<-------GAMYB  --------->GLK1(2)     --------->ICU4 --------->AHL20(2)
---ZmHOX2a(2)       <---------ZAT6 <---------GLK1(2)     <---------TOE2(3)<-----------GT1<---------TOE2(3)
-ZmHOX2a(1) <---------MYB46(3)   ----------->ARR10      --------->YAB1   <---------AHL20(2)    <----
 
tcaattcaacttttgttgttggactgttatgaggttgagattctcgtgaacaactccattgatgattattaattaattaactagtgttattttatgttga  18619300
<- Previous    Next ->

AGI:  At5g45850.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81695.1); contains InterPro domain Protein of unknown function DUF688 (InterPro:IPR007789)
Range:  from: 18616986    to: 18618797    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version