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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
At4g35610
<---------
MYB46(3)
----------->
HVH21
<---------
ALFIN1
<---------
ANAC46
<------
MYB46(1)
<---------
ZAT18
--------->
MYB52(1)
<-----------
GT1
<------
MYB83
--------->
ANAC46
<---------
MYB52(2)
<-------
GAMYB
--------->
MYB59
---
HSFC1(1)
--------->
ZAT2
<---------
ANAC58
--------->
ATHB12
---
HSFB2a(2)
<---------
At4g35610
<---------
ANAC58
<---------
YAB1
-->
HSFB2a(2)
<---------
ZAT2
<---------
LBD16
<----------
DOF2
<
aactcacttactccacttgagctgcaattaacagagaaacttgcggttgaagaaaccatttccatagctttgattaggtctgactcttcgactaggtttt
18618400
--------->
HSFC1(2)
<---------
MYB46(3)
---------->
ID1
<---------
HSFB2a(1)
--------->
ALFIN1
--------->
HSFB2a(1)
<---------
HSFB2a(2)
<---------
TOE2(3)
<----------
DOF2
--------->
MYB52(1)
<---------
ANAC58
----------->
TGA1
-------
<---------
ANAC58
----------->
HVH21
<---------
ICU4
------>
ZmHOX2a(1)
--------->
MYB52(2)
<---------
MYB52(2)
--------->
ANAC58
-------->
HAHB4
<----------
DOF2
<---------
MYB46(3)
--------->
DEAR3(2)
--------->
ANAC58
--------->
ICU4
<-----------
GT1
--------->
LBD16
--------->
At4g35610
--------->
ANAC46
--------->
YAB1
-----------
GT1
<-----------
RAV1(2)
---------->
DOF2
<---------
HSFC1(2)
----------->
GT1
<---
ttttatcctttggctttccaggtgtttgttcccatttgaaaggaactgacgatggttccattacatgctcgaaactctggtcttgtaataatcgaatcag
18618500
------->
TEIL
---------->
ID1
--------->
YAB1
-->
YAB1
<---------
ANAC58
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
------
GLK1(2)
<---------
ANAC58
<---------
GLK1(1)
<-----------
TGA1
<---------
MYB52(1)
aatttcattctctgtttcttgacatgaatctttgatttctctccttctcgtcgtcatcgtcttcttcttggtgttctctgattcgtttggatcatcaggt
18618600
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ANAC58
--------->
ANAC58
<---------
LBD16
--------->
MYB52(1)
--------->
ARR11(3)
--
----------->
HVH21
<-----------------
AGL3
<---------
YAB1
--
--------->
ANAC58
----------------->
AGL3
<---------
At4g35610
<---------
ARR11(3)
--------->
ANAC58
--------->
At4g35610
<---------
ANAC58
------>
ZmHOX2a(1)
--
<---------
GLK1(1)
--------->
GLK1(2)
<---------
ANAC58
<----------
DOF2
<-----
--------->
GLK1(1)
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
ARR11(3)
<------
ttagtcggaactcgcctcacggataggaatggagcatctaaatttagtttcttctcctccat
ttttgcttctgataaaaatcctttcaagaactctcttt
18618700
--------->
AHL20(2)
------->
ANAC46
<-----------
HVH21
----------->
GT1
------->
ANAC58
---------->
DOF2
----------->
GT1
------->
ANAC58
<----------
DOF2
---------->
DOF2
---------->
DOF2
------
HVH21
--------->
TOE2(3)
<---------
YAB1
--------->
GLK1(2)
*
TSS
----
DOF2
--------->
TOE1(3)
<---------
TOE2(3)
---------->
DOF2
<XXXXXXXXX
caccccaaaaaaaataaactttaaagaaggtgtcaagaattaagaaagtgtaaaatgtataaatgaaaaggaatctaaagagttagtgatgttttct
gtt
18618800
---------->
DOF2
<---------
AHL20(2)
<---------
AHL20(2)
<------
ZmHOX2a(1)
------------>
CBF
--------->
ZAT6
--------->
AHL20(2)
--------->
GLK1(2)
---
<----------
DOF2
--------->
YAB1
--------->
AHL20(2)
---------->
DOF2
<---------
GLK1(2)
----------->
GT1
XXXXXXXXXXX
MIR415
<-----------
GT1
------------------------>
ANAC81
--------------------->
WRI1
tctgctttgctatatacaatcagagaaataacaccatttattagaaaacaaaaaaaataaagacgatttaaagaatctacatagggaggaccgaaaaatg
18618900
<---------
YAB1
--------->
YAB1
<---------
ICU4
--------->
ICU4
--------->
ARR11(3)
--------->
DAG2
----------->
GT1
---------->
DOF2
---------->
DOF2
<---------
TOE1(3)
--------->
AHL20(2)
--------->
At5g28300
<---------
TOE2(3)
<---------
ATHB12
----------->
GT1
<---------
ATHB12
--------->
AHL20(2)
--------->
YAB1
--------->
ATHB51
<---------
ATHB51
-----
---->
TEIL
--------->
WOX13(1)
----------->
GT1
<---------
ICU4
<---------
ARR11(3)
<---------
YAB1
aatgttaggggaagagtcagtcaataaataaagtgtctcaatggtaaaatttagaattatcgcagtaaaaagataattcaattatggttttgataaaaaa
18619000
--------->
ANAC58
--------->
ANAC58
<---------
AHL20(2)
--------->
MYB52(1)
<---------
AHL20(2)
--------->
ANAC58
--------->
AHL20(2)
<-
--------->
ANAC58
<---------
AHL20(1)
--------->
YAB1
-----
--------->
ANAC46
--------->
AHL20(1)
--------->
AHL20(2)
------
--------->
SPL7
<---------
AHL20(2)
--------->
YAB1
--------
<---------
SPL7
--------->
AHL20(2)
---------->
DOF2
--------->
YAB1
<---------
MYB46(3)
----------->
GT1
--------->
AHL20(2)
--------->
AHL20(2)
<---------------
AtSPL3
--------->
YAB1
<---------
AHL20(2)
----------->
GT1
<-----
<---------------
AtSPL8
--------->
ICU4
<---------
AHL20(2)
--------->
YAB1
--------->
TOE2(3)
---->
AHL20(2)
---------->
DOF2
----------->
GT1
--------->
AHL20(2)
----------->
GT1
<---------
ICU4
-
aaatggtggtacgaaacgaaagaatggatggaatgataaatttattcaaattaaaaattaaaagaagaataataaaaaatagggataaacattaaaaata
18619100
--------->
CCA1(2)
--------->
YAB1
-------->
HAHB4
<---------
YAB1
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
ICU4
<---------
ARR11(3)
--------
AHL20(2)
<-------
TEIL
---->
AHL20(2)
<-----------
GT1
<---------------
AtSPL8
--->
AHL20(2)
<----------
DOF2
<---------
ANAC46
->
YAB1
--------->
ARR11(3)
<<<<<<<<<<<<<<<<<
LFY
<---
----
AHL20(2)
<---------
DAG2
<---------
HSFB2a(2)
--------->
ARR11(3)
<---------
YAB1
-------->
YAB1
<-----------
GT1
--------->
HSFB2a(2)
<---------
GLK1(2)
<----------
DOF2
<-----
aataataataatagatatagtcacctttcttactgtttcagaacaatggggggtacaagatttttgtttgagaaaatatgactttcgaatttcgatagga
18619200
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ICU4
--------->
ICU4
<---------
TOE2(3)
<---------
YAB1
<---------
MYB52(1)
<---------
ICU4
<-----------
RAV1(1)
--------->
MYB46(3)
<---------
YAB1
<---------
AHL20(2)
<-----------
RAV1(1)
<---------
ANAC46
<---------
YAB1
<---------
ZAT6
<----------
DOF2
<-------
GAMYB
--------->
GLK1(2)
--------->
ICU4
--------->
AHL20(2)
---
ZmHOX2a(2)
<---------
ZAT6
<---------
GLK1(2)
<---------
TOE2(3)
<-----------
GT1
<---------
TOE2(3)
-
ZmHOX2a(1)
<---------
MYB46(3)
----------->
ARR10
--------->
YAB1
<---------
AHL20(2)
<----
tcaattcaacttttgttgttggactgttatgaggttgagattctcgtgaacaactccattgatgattattaattaattaactagtgttattttatgttga
18619300
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AGI:
At5g45850.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G18630.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81695.1); contains InterPro domain Protein of unknown function DUF688 (InterPro:IPR007789)
Range:
from: 18616986
to: 18618797
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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