Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ARR11(3)                    <---------ARR11(3)    --------->ARR11(3)       ------->GAMYB      ---------->DOF2    --------->ARR11(3)                     ----------->RAV1(1)       <-------TEIL  ----------->RAV1(1)    <---------ARR11(3)               <---------ICU4             ----------->RAV1(1) <----------ID1  ----------->RAV1(1)    <---------YAB1 --------->TOE2(3)        <----------DOF2   aagacaacaaaagttttagcaacatattatcttgaatttgtgaagatagtgtctattccataattccaacagagtggtatgtctttgcgacatacacaca  18408000                                        <---------ARR11(3)                                  <-----------GT1                             --------->AHL20(1)                             <---------AHL20(1)        --------->ANAC58                           <---------ARR11(3)          --------->ANAC46                           --------->AHL20(1)          --------->ANAC58                           <---------AHL20(1) --------->YAB1                               --------->ATHB12                     --------->GLK1(2) <---------CCA1(2)      <---------ANAC46             <---------ICU4              --------->GLK1(2) <---------AHL20(2)    <---------LBD16                     --------->ICU4   tagacgagctcatgagaatcaagaatcaatatatattatctatatctaacatattccacgcatttcgagtaaccaagatagatgttttagtagttattgc  18408100                               <------MYB83                               <------MYB46(1)                              <---------------AtSPL8                              <---------------AtSPL3                              --------->MYB59                             <--------P         --------->AHL20(2)                              -----                       <-----------GT1    ----------->GT1                                 --------->ARR11(3)                 ----------->GT1    ----------->HVH21    ----------->GT1       <---------ANAC46 <----                --------->DAG2--------->MYB46(2)<---------AHL20(2)         <---------ANAC58    <-----               ---------->DOF2--------->MYB111(1)     ---------->DOF2      <---------ANAC58<------ZmHOX2a(2)   caaactatgtgtgtgcataaagtattaacaagtaggtactgacctagtaaaaaaatgaaaggtataacttataagtttcttacgagtacttagatcactc  18408200                                                                          <-----------GT1                                                                      -------->ATHB1                                                                      --------->ATHB51                                                                     <---------ATHB51    --------->ATHB12                                                 <---------AHL20(2)            <-    <---------ICU4                                                   <---------YAB1                <-   <---------YAB1                                                    --------->ICU4                --   --------->ICU4                                          <---------------AtSPL8                 <-- <---------TGA2(1)                                     <------------CBF<------------CBF           <-- <---------bZIP60(1)               --------->AHL20(2) --------->ATHB12--------->ATHB12            --- --------->bZIP60(1)      --------->YAB1      -------->ATHB1    --------->ANAC58              <------ --------->TGA2(1)    <---------------AGL15   <---------ICU4 <---------SPL7  <----------DOF2  ------- ---->YAB1            --------------->AGL15   --------->ATHB12  --------->ANAC58             -------- -----ICU4           ----------------->AGL2  <---------YAB1--------------->AtSPL3           --------- ----ATHB12          ----------------->AGL3--------->YAB1  <---------------AtSPL3           <--------   atgacatcattgtccaagtggaaaccattaatagcaaataaacaaaaatcattgacttattgaagtacgaaattattgactttctcccatttcatcatca  18408300  --------->YAB1  ----------->GT1 --------ICU4 -------ATHB1                            --------->TGA2(2) ------->YAB1                           <-----------TGA1 -------ATHB51                          <-----------HVH21 -------ATHB12                         --------->ANAC58 ------>ICU4                           --------->ANAC46 ---YAB1                       --------->ARR11(3)                       --------->TOE1(3) ----->CBF           <---------ANAC58  --------->ANAC55(2)              --------->TOE2(3)   <-------- ->TOE2(3)           <---------ANAC46  --------->ANAC58              <-----------GT1     <---------ARR11(3) >YAB1               <---------ANAC58  --------->ANAC55(1)   --------->YAB1         <-------TEIL -ICU4------------>CBF         <---------ARR11(3)  *TSS      ----------->GT1       --------->GLK1(2)   ataatggtaacaatttctaatttgtgtggatagtatcttatacgtcatgacaactcttgggaatggtaatttaaccatagaagagattcaatttcttttt  18408400                                                  <---------ARR14(2)                                     <----------DOF2                                  --------->GLK1(2)       <---------YAB1                                 <---------GLK1(2)--------->ARR14(2)                           ------                                 <---------ARR11(3)--------->GLK1(2)              --------->GLK1(2)                        <---------------AGL15     <---------ARR11(3)              <---------ARR11(3)               <----------DOF2 <---------YAB1     <---------GLK1(2)               --------->ARR11(3) --DOF2   <---------GLK1(2) <---------ATHB12      --------->ARR11(3)             <---------GLK1(2)   ctaagtttattagattcctttgtttgctaaatcaagattctttcaagttgaagattctttctaatagtatatacaagagggaagaatctttcaactatca  18408500                                                                                                   <-                                                                                                <----                                                                                              ------>MYB83                                   --------->YAB1                                      <---------HSFB2a(2)                                  <---------ATHB12                                 <---------GLK1(1)                                --------->WOX13(1)                           --------------------->WRI1                          <----------DOF2  ---------->DOF2                   <----------DOF2  ------>MYB46(1)                          <---------DAG2----------->GT1<------ZmHOX2a(1)  ------>ZmHOX2a(1) <-------- --->ZAT6              <-----------GT1  <---------ANAC55(2)        --------->REM1(1)   --------->HSFB2a(2)   ctccctacaaattccatgagaaaattcacttttccaatcaaaacgtaaagaagaagaggaagaatggctacatgtcctcctttcgatttctcgaccaaat  18408600               <------NtERF2               --------->ATERF1(1)               --------->At4g35610               <---------At4g35610             <---------ANAC46            <---------LBD16            <------NtERF2           <---------RAP2.3(1)           <---------RRTF1(1)           <---------ERF1           ------>NtERF2          <---------RRTF1(3)          <---------RRTF1(2)                                                     <---------MYB52(1)          <---------ATERF1(2)                                                   --------->At5g28300          --------->ATERF1(2)                                                   --------->LBD16          <---------O2                                                       ------>NtERF2          <---------RAP2.3(3)                                               --------->ANAC46          <---------DEAR3(1)                                                --------->ANAC58          <---------RAP2.3(2)                   --------->ANAC58            --------->ANAC58          <---------ANAC46                      ----------->HVH21          --------->SPL7          <---------bZIP60(1)                   --------->ANAC58          <---------ATERF1(1)         --------->ATERF1(1)           <---------LBD16                 <---------MYB46(3)       ----------->TGA1           <---------GLK1(2)                   --------->WRKY38(1)           <     <---------MYB46(3)          --------->HSFC1(2)                  <---------MYB52(1)            <- <---------YAB1<-------GAMYB     <---------At4g35610               <---------ANAC58           <------ ----------GT1<---------MYB46(3) <---------HSFC1(2)<---------DEAR3(1)--------->ATERF1(1)      <------ -----ICU4<---------RAP2.6(2)    --------->At4g35610               <---------ANAC58 <---------YAB1 <- -MYB59----------->HVH21    <------NtERF2    <------NtERF2   <------ZmHOX2a(2) <---------ANAC46 -----   attacgatggtgacggcggatgccagaggcagagcagcttcttcggaggcacgacggtgctcgatcaaggcgttggctacgccgtgattcttggttttgg  18408700          <---------RAP2.6(3)           --------->ARR14(2)        ---------->ID1                  <---------ARR14(2)    <----------DOF2                  <---------ANAC58 ----------DOF2                   <-----------GT1 --------ANAC58                --------->MYB52(2)                    --------->ANAC58           ----- ---AtMYB61                  <---------MYB52(1)                      --------->ANAC58       <-------- -----RAV1(1)                <--------P<---------MYB52(1)          ---------->DOF2          <-------- --------ANAC58      <----------DOF2 <---------ANAC58           <---------YAB1        --------->ATHB12 ----->ID1------>NtERF2    <---------MYB46(3)            <----------DOF2             <---------YAB1   tgctttctttgccgtcttcacatcttttttggttagtttccgtttctgaattacaaatactttcttatgaaaagcaagacgacttctatgatttgctcgt  18408800                                                                                            ---------                                                                                     <----------DOF2                                               <------ZmHOX2a(1)                  <---------YAB1 ------>HVH21                                <---------TOE2(3)                   --------->KAN4(2) -ANAC58                              --------->AHL20(2)                        <---------KAN4(1) -ANAC58                   <---------YAB1  ---------->DOF2<---------YAB1       <---------YAB1   gaccacaaaaaatagtagtcatatggtttatgctaacaaataaaacaaaggatgctaattttcattgtttagtagacgttgattattcttttttgttttt  18408900  Previous    Next  AGI:  At5g45380.1    Description:  sodium:solute symporter family protein. similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ55786.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66700.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ50665.1); contains InterPro domain Na+/solute symporter; (InterPro:IPR001734) Range:  from: 18408351    to: 18413121    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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