Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            ------>ZmHOX2a(1)                                                                                       ==============                                                    --------->ANAC58                   <------ZmHOX2a(2)                                                    --------->ANAC58                  <---------ARR14(2)                                                    <---------bZIP60(1)               --------->ARR11(3)                                                    --------->bZIP60(1)               --------->ARR14(2)                                                    <---------ANAC55(2)           ------>MYB46(1)<---                                                    --------->ANAC55(2)           --------->MYB52(1)                                         <----------DOF2                          ------>MYB83-------                                      <---------ARR11(3)                         --------->MYB55(1)                                      --------->ARR11(3)                        <---------MYB55(2)                            <---------AtLEC2        --------->ANAC46            --------->MYB46(3)    <-----------HVH21  --------->ZAT2 <---------ARR11(1) --------->ZAT6         <---------MYB46(2) --------->HSFB2a(2)   <---------ZAT2<---------CCA1(2) ----------->RAV1(1)      --------->AtMYB61---- -ANAC58               --------->At4g35610       ----------->TGA1            <-----------GT1<-------- -ANAC58               <---------At4g35610  --------->ZAT6    <---------TOE2(3)--------->ANAC46 <----   cttcgaggtcacaaactctagagcctgcttccatggctcatatctttcactatgacgcaacactaatgtttctaatttttcaccaaacgatcctgttagg  18307200                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                          ------>ZmHOX2a(2)                                                                          <---------ICU4           <-----------GT1                                              --------->ARR11(3) ==HOX2a_HOX2a          <---------HSFB2a(2)                    <---------ALFIN1   <---------ZAT2 ------ARR14(2)         --------->HSFB2a(2)                  --------->ANAC46     --------->ZAT2 -->MYB59<---------AHL20(2) --------->ZAT14                  <---------ALFIN1<-----------GT1 ----->ARR14(2)        --------->REM1(2)                   <---------ALFIN1<----------DOF2 -MYB52(1)<-----------GT1   <---------ZAT14              ------>NtERF2  <---------ARR11(3) --ZmHOX2a(1)    <---------ALFIN1   <---------GLK1(1) ------>NtERF2 <----------DOF2      ---------->DOF2   aacctcacgattttaacgtccaccttgtagaacactggaaataccaccaaggtccctgcctccacacactctttgatctttaccagctcatttaagcacc  18307300                 <---------ANAC46            ------->TEIL                                                    --------->ARR14(2)          --------->ZAT14                                                --------->HSFB2a(2)          <---------ZAT18                                  --------->HSFB2a(2)          <---------ZAT14                                  <---------HSFB2a(2)    <---------ZAT18        --------------->AtSPL8    --------->YAB1          <---------LBD16<---------HSFB2a(2)  -------   attgtgactcagtgtacctgcttgaaatgaccacaatcgcaatcttcgactcttgtattctctggaataggttttccagacctgtgcccattgtttctcg  18307400                                                                              <---------LBD16                                                                              ------>ZmHOX2a(1)                                                                              --------->HSFB2a(2)                                                                              --------->LBD16                                                                         <---------At4g35610                                                                         <---------ZAT2                                                                         --------->At4g35610                                                                         --------->ZAT2                                                                        ----------->ARR10                                                                    --------->At4g35610                                                              <-----------HVH21                                                             <-----------RAV1(1)                    <            ------->MYC3                         <---------WOX13(1) --------->ZAT2              <----            <-------MYC3                    --------->At4g35610     <---------At4g35610         <---- -->HSFB2a(2)       <----------DOF2 <----------DOF2     ------->TEIL<---------ZAT2    <---------AHL20(2)   agtgtctatgaacacgttgattctttccctctccaaggctttcagtagatgactgatgaacttgtgtcgcagctcagctcctcggaaatttatgaacact  18307500                  <-----------RAV1(1)                --------->ZAT2                <---------ZAT2                --------->At4g35610                <---------At4g35610               <-----------RAV1(1)               <---------MYB46(3)               <---------ATERF1(1)              <---------DEAR3(1)             <-------GAMYB             --------->At4g35610             <------NtERF2             --------->ATERF1(1)             <---------At4g35610             <---------ZAT2            <---------ATERF1(1)            <---------RAP2.3(1)            <---------DEAR3(2)            <---------ERF1            <---------RRTF1(1)            <---------MYB46(3)            ------>NtERF2            <---------RAP2.6(1)           <---------RAP2.3(3)           <---------RAP2.3(2)           <---------ANAC46           <---------DEAR3(1)           <---------ATERF1(2)           <---------RAP2.6(2)          <------NtERF2          --------->ATERF1(1)          --------->RAP2.3(1)          <---------At4g35610          --------->DEAR4(2)          <---------DREB2C(1)         <---------ATERF1(1)         <---------RAP2.6(1)         ------>NtERF2         <---------RRTF1(1)         <---------ERF1         <---------DEAR4(2)         <---------ORA47(2)         <---------RAP2.3(1)        --------->ALFIN1        <---------DEAR3(1)        <---------RAP2.3(3)        <---------ANAC46        <---------RRTF1(3)        --------->DEAR3(1)        <---------RRTF1(2)        <---------RAP2.3(2)        <---------ATERF1(2)        --------->ATERF1(2)        <---------RAP2.6(2)       <---------ABI4(1)       --------->ATERF1(1)       ------>NtERF2       <------NtERF2      <---------ATERF1(1)      <---------RRTF1(1)      <---------ERF1<---------ANAC46      <---------RAP2.3(1)     <---------RAP2.3(3)     <---------RRTF1(3)     <---------ANAC46     <---------ANAC58     <---------RRTF1(2)     <---------DEAR3(1)     <---------ANAC58     <---------RAP2.6(2)     <---------RAP2.3(2)    --------->MYB46(3)            <---------TOE2(3)      <----------DOF2    <---------LBD16<---------At4g35610              <------NtERF2            <----------DOF2 -----------RAV1(1)<---------ZAT2                 --------->RAP2.6(2)     <-----------GT1 -----DAG2--------->DREB2C(1)                <------ZmHOX2a(1)            ---------->ID1 ------DOF2--------->ATERF1(2)            <------ZmHOX2a(1)              <-----------GT1          <--   ttatgttgcggcggcggctgctgctggtgaaccactacgtttgaggaggaagtcgccatcaacgttggagttgtttttcctttcttttgtacaaaatgaa  18307600                                                                                          <---------YAB1                                                                                       <---------YAB1                                                                                     --------->YAB1                                                                                     -------->ATHB1                                                                                     <---------ICU4                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                             <------MYB83           <---------YAB1                                                             <------MYB46(1)   ------>ZmHOX2a(1)                                                           <---------WOX13(1) --------->TOE2(3)                       <----------DOF2                    <------------CBF   --------->YAB1--------->ATHB12                    <---------------AGL15                <<<<<<<<<RAP2.2------------>CBF--------->YAB1                    --------------->AGL15           <----------DOF2<------ZmHOX2a(1)--------->ICU4             <----------DOF2  ---------->DOF2   <----------DOF2   ----------->GT1   --------->AHL20(1) ----ZmHOX2a(1)  <-----------GT1       ---------->DOF2  <---------TOE2(3) --------->WOX13(1)   ggacacaaacgttttctttttacttctttttgcaaagtggcaaaagctaactttcttttagattggtgaggaaaatcaatcctaaaattattatgattta  18307700                                                          --------->AHL20(2)                                                     ------->MYC3                                                     <-------MYC2                                                     <-------MYC3                                                    <---------ANAC55(2)                                                    --------->ANAC58                                                    --------->TGA1a                                      <---------------AGL15                                      --------->AHL20(2) <---------YAB1                                <---------ARR11(3)  =================================================bZIP_DOF                           ------------>CBF         --------->ANAC58                         --------->DEAR3(1)         --------->ANAC46                         --------->AtMYB61          --------->ANAC55(2)                --------->ARR11(3)    <---------YAB1<---------O2           <---------ANAC58            <------------CBF--------->AtMYB61       --------->O2  <---------AtLEC2          <---------YAB1--------->MYB46(3)          <---------TGA1a        <---------ANAC58 ---------         ------------>CBF<---------ALFIN1           --------->ANAC55(1)<------------CBF    --------->DAG2       <---------ZAT6--------->ZAT18  ----------->TBP------->MYC2 <---------ANAC58        ===========   <---------ZAT14   <---------ZAT18 <-----------------AGL3     <---------YAB1   ------>ZmHOX2a(1) <-   --------->ZAT14<------------CBF<---------ANAC46<---------ALFIN1<---------ANAC58        ---------->DOF2   tgaactgtagtgacaattgatattgcaccaccaatgtcttataaatatgggaacacgtgattatatatgcttggattgcattcctccgataaaaaagtta  18307800                       --------->ARR14(2)                      --------->AtLEC2                       <---------ARR14(2)                   <---------ATHB12                  <------------CBF                     <-----------TGA1               <-----------TGA1                        <-----------HVH21               <-----------HVH21                      =============================================bZIP_DOF              --------->ANAC46  --------->CCA1(2)     --------->ANAC58              --------->ANAC55(2)                     --------->ANAC55(2)                     <------              --------->bZIP60(2)                     --------->ANAC58                        -------              --------->ANAC55(1)        ----------------------->TaNAC69(2)                  --------              --------->TGA1a  <---------AGP1         --------->ANAC46                       --------              <---------O2     <-----------ARR10      --------->ANAC55(1)                    <-------              --------->ANAC58 --------->AGP1         <---------ANAC55(2)                    <-------              --------->ANAC58 --------->ARR11(3)     ============================MYC_MYB    <-------              <---------ANAC55(2)   --------->ANAC46  --------->bZIP60(2)        <---------WOX13(1)              <<<<<<<<<<HY5    <---------ARR14(2)     <---------TGA1a           <---------ARR14(2)              --------->O2     --------->ARR14(2)     <---------O2              --------->ARR14(2) <-             <-----------STF1  <---------ARR11(3)     --------->O2         --------->MYB52(2)-------- -->GT1     <---------ALFIN1  <---------CCA1(2)       --------->TGA1a    <--------P         <-------- =======================bZIP_DOF<------ZmHOX2a(2)    <-----------STF1 <---------TOE2(3)     --------- --------AHL20(2)--------->ATHB12------>ZmHOX2a(2)  <---------ALFIN1<---------ARR14(2)  ---------->DOF2   tattttttaaaacaacacgtcattggatattcagatctacgtcgactaacttcaacacgtcactcatgcatataggttagtagattggcataaagatatc  18307900 --------->ANAC46 ---ARR11(3) -->ARR11(3) ->GLK1(1) ->RVE1(1) --GLK1(1) --RVE1(1)                                                    <---------ANAC58 --CCA1(1)                                                    <---------ANAC58 --------ALFIN1        <-----------RAV1(1)                  <-----------GT1 ->CCA1(1)    --------->TOE1(2)                  <---------ANAC46                                <--- -ARR11(3)    --------->TOE2(2)                  <---------ANAC58                               <---- >ARR11(3) <---------CCA1(2)                     <---------ANAC58    <-------GAMYB              -----   tccactcgagcgcatacctgtgagtatgttggcacttggcatatagatgtttcttgtagtttttacttgggagttgtcttatctatgcataagatgaatt  18308000                                                                       ------>ZmHOX2a(2)                                      ---------->DOF2                 <------ZmHOX2a(2)                                    <---------YAB1                   <---------ARR11(3)                   <---------------AGL15                             --------->ARR11(3)                   --------------->AGL15                <---------HSFB2a(2)           <----------DOF2<---------ZAT18               --------->HSFB2a(2)                     ----- ------AHL20(2)   <-----------------AGL3  <---------GLK1(2)      <-----------GT1          <---------ALFIN1 -----AHL20(2)    <-----------------AGL2  <---------ARR11(3)  <---------ICU4      <---------ANAC55(2) ---->AHL20(2)    <-----------------AGL1  --------->ARR11(3) --------->ICU4       --------->ANAC55(2)   aatttgttatgcgctttcttactcttaatggactcactatgaaagatacttctgccttctggacttattacgatctctctagtcacttaacaacactccc  18308100  Previous    Next  AGI:  At5g45200.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT4G36150.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT2G17060.1); similar to RPS4 (RESISTANT TO P. SYRINGAE 4) [Arabidopsis thaliana] (TAIR:AT5G45250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16318.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro:IPR002182); contains Range:  from: 18301194    to: 18307559    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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