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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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        ----------->GT1                          <---------SPL7
   --------->HSFB2a(2)                     --------->ARR14(2)          ------>ZmHOX2a(2)
   <---------HSFB2a(2)                --------->ZAT14                 <---------GLK1(1)
-------RAV1(2)                        <---------ZAT14                <---------ARR11(3)            <
-----HVH21                            --------->ZAT18                --------->ARR11(3)         <---
 
aggtttgtagaaggaaacactcttcttgttatctcgacgagagcagtatcgccatacgaattcaaaacttgtgatctctgcgacttctaattcgcctaga  17705500
                                                                                                   <
                                                                                              ------
                                                                                          ------->GAMYB
                                                                                         --------->ANAC46
                     <---------WRKY18(1)                                                 --------->ANAC58
                    --------->WRKY38(1)                                       --------->YAB1 -------
             ---------->DOF2                       --------->ZAT18        <---------MYB52(2) <------
            --------->AtMYB61                  --------->DAG2            <---------ZAT2  --------->ANAC58
       ------>ZmHOX2a(1)                      ---------->DOF2            <---------At4g35610 -------
      --------->TOE2(3)                    --------->ANAC58              --------->At4g35610<-------
---------GLK1(2)    --------->WRKY12---------->DOF2<-------TEIL          --------->ZAT2--------->MYB52(1)
------WOX13(1)      ----------->HVH21      --------->ANAC58   --------->TOE2(3)--------->TOE2(3)   -
 
ttgattcttcctaaaccaaagccttgacctgaatcaattcaaagccaagaaaagtgcatcaaaaacctttgtactcagctaacataaatccaacggaatc  17705600
    =============================HOX2a_HOX2a
    ------>ZmHOX2a(1)
   --------->TOE2(3)                                                      <---------HSFB2a(1)
   --------->TOE2(2)                                                      --------->HSFB2a(1)
   --------->TOE1(2)                                                      --------->HSFC1(2)    ----
---------GLK1(1)                                                      ----------->GT1          -----
--->At4g35610                                                      <---------LBD16       ------>ZmHOX2a(2)
-->ARR14(2)                                               --------->LBD16 <---------HSFC1(2) -------
---ARR14(2)                                              --------->HSFB2a(2)            <------ZmHOX2a(2)
-->GLK1(2)                                               <---------HSFB2a(2)           --------->ARR14(2)
--GLK1(2)      <---------AtLEC2                 ----------->GT1 <----------DOF2        <---------ARR14(2)
-------->GLK1(1)          <------ZmHOX2a(2) ---------->DOF2 <---------GLK1(2)    <---------GLK1(1)
 
tgaaatcctaagacttgtccatggattggatcaaatcacatcgaaactaaagagttaaatccagaaactttgggggaaaattcgaattccgatctgaaaa  17705700
                                         ----------->HVH21                                         -
                                     <-----------GT1                                              <-
                                  <---------ICU4                                                  <-
                              <---------AHL20(2)                                      <---------ARR14(2)
                            ----------->GT1                                           --------->ARR14(2)
                            --------->ANAC55(2)                                    <---------TOE1(3)
------->GT1      --------->ATHB12--------->ICU4                                   <-----------RAV1(2)
---->DAG2 --------->YAB1    <---------ANAC55(2)--------->ZAT18               <---------HSFB2a(1)  <-
--->DOF2 --------->ICU4  --------->ICU4----------->RAV1(2)                   --------->HSFB2a(1) <--
 
ggtaaaattgaaatgatgaacaattggaattatgtaatttttacctgaaggccactggggaagagaagcagggagagagaaggtttcaggttccttcaat  17705800
           <---------TOE2(3)
       <----------DOF2
    --------->GLK1(2)
   --------->KAN4(2)
  --------->GLK1(1)
  <---------GLK1(1)
  --------->KAN4(1)
  <---------KAN4(1)
  <----------TaMYB80
 --------->ARR14(2)
 ---------->TaMYB80
 <---------KAN4(2)
 --------->ARR11(3)
 <---------ARR11(3)                                                                --------->ANAC46
 <---------ARR14(2)                                                               <---------HSFB2a(2)
<------NtERF2                                                                --------->HSFB2a(1)
-------->LBD16                                                               --------->HSFC1(2)
--------ANAC58                             <---------ICU4                    <---------HSFC1(2)  <<<
--------ANAC46  --------->KAN4(2)          --------->HSFB2a(1)      <-------TEIL  --------->HSFB2a(2)
--------ANAC58 <---------KAN4(1)          <---------ATHB12  ----------->HVH21<---------HSFB2a(1) <--
-------LBD16   --------->KAN4(1)      <xxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->TOE1(2)       *TSS
 
ggcggatattctttgagattgttccaatacagacatttgcatccaaacattccctctgtctctctgaaagattcatacgatgcttcgcgaaaccattaca  17705900
                                                                                 ------------>CBF
                                                                           --------->YAB1
                                        <----------DOF2                    -------->HAHB4
      <---------DDF1             ------------>CBF                          <--------ATHB1
      ----------->RAV1(1)      --------->PCF2                              <---------ICU4
     --------->DEAR4(1)       <---------PCF2                              <---------YAB1
     --------->DEAR3(1)      <------MYB83                                 <---------ATHB51
     --------->At1g77200     <------MYB46(1)                              --------->ICU4
     --------->DREB2C(2)     <---------ANAC58                          <---------YAB1
 --------->MYB46(3)          <---------ANAC58                        --------->YAB1           ------
<<<<<<ARR2                  <---------MYB46(3)                      <---------YAB1       <----------DOF2
-------ATHB12               --------->MYB59              <-----------GT1--------->YAB1<---------ARR11(3)
 
atcaaacaccgacatatatcaaaaaccttgttgggtcccaattctttaatcttcgagttttttcgatttttctgataataattcttcaatttctttttca  17706000
                                      <---------At4g35610
                                      --------->At4g35610
                                   ---------->DOF2
                             ----------->RAV1(1)
                            <------NtERF2
                           ------>NtERF2                      --------->DAG2
                          --------->ETT(2)                   ---------->DOF2
          ----------->GT1 <---------ETT(2)           --------------->AtSPL3
   --------->MYB52(1)   <-----------HVH21           --------->ZAT14
--->YAB1----------->GT1<-----------RAV1(1)          <---------ZAT14       ---------->DOF2    -------
 
taaaaaaaacagagtgaaaatatgttctgtcgccccataaaagctgatgtctcagagcagtacataaagctcggagacaaaggaacagaagcacattgat  17706100
                              --------->DAG2
                          <---------------AGL15
                          --------------->AGL15                                        <------------
                         ----------------->AGL3                              ------->GAMYB
                         ===========================================================================
                     <------ZmHOX2a(1)                                    --------->MYB52(1)  ------
-->YAB1            <---------TOE2(3)  ----------->GT1           ---------->DOF2   ---------->DOF2
 
gaagtttggaattcaatccagtaaggaaaccaaaaattgaaatgttataccaaaactaaaccattcccaaagggagataacagtcaaaagctctaaatgg  17706200
                                                                       ----------->RAV1(1)
                                                                       ------>MYB83
                                                                       ------>MYB46(1)
                                              ---------->ID1        --------->ANAC58
                                       <---------ARR11(3)           --------->ANAC58
                                       --------->GLK1(2)            --------->ANAC46
      --------->YAB1                   --------->ARR11(3)         ------>MYB46(1)
---AGL15       ---------->DOF2  --------->ANAC58                --------->AtMYB61
===MADS_MADS  --------->AHL20(2)--------->ANAC58                <---------MYB59      <-----------GT1
----->GT1     <---------AHL20(2)--------->ANAC46  <----------DOF2 ------>MYB83 ----------->GT1
 
ctaaatctataacaaatttaaagaaaaacatatataagccaaaatctttgtttctttgagccaaaaaccaaacccaacaaaatagaaattacaaactact  17706300
                                                                                                   <
                                                                                              ------
                                                                                           ---------
                                                                                           <--------
                                                                                        --------->ABI4(1)
                >>>>>>>>>TBF1                                                          --------->AtMYB61
          <---------TOE2(3)                                                            <---------ALFIN1
         --------->DAG2    <---------ICU4                                              --------->DEAR3(1)
        ---------->DOF2    <--------HAHB4                          <----------DOF2    <---------MYB55(2)
  --------->LBD16          --------->ATHB12                     --------->GLK1(2)     --------->MYB46(3)
 <---------ANAC58          --------->YAB1                      <---------GLK1(2)    --------->AtMYB61
 <---------ANAC58         <---------ATHB12            <----------DOF2     <----------DOF2 --------->DEAR3(1)
 <---------ANAC46  <---------ARR14(2)        --------->ZAT6  ----------->ARR10     --------->MYB46(3)
 
tcttccgtagataaaggaagaagaactgaatcatttcattctttggtagcactaaaactttgacgagattcttttttcttttagcgaccaccaccgcggt  17706400
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AGI:  At5g43950.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G04090.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61465.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40557.1); contains InterPro domain Protein of unknown function DUF946, plant (InterPro:IPR009291)
Range:  from: 17703727    to: 17705895    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g43960.1   
Description:  nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein. similar to nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:AT3G25150.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71299.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677); contains InterPro domain Nuclear transport factor 2; (InterPro:IPR002075)
Range:  from: 17706015    to: 17709166    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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