Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->TOE1(2)                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      <---------ARR14(2)       ----------->GT1                                                                --------->ARR14(2)   --------->At4g35610                     ----------->HVH21                      <---------At4g35610   <---------At4g35610                   ------>ZmHOX2a(1)                      <---------WRKY45  ---   <---------ZAT2                    --------->ARR14(2)                         <---------WRKY38(1)   --------->ZAT2            <---------GLK1(1)                                  <---------WRKY12  --- ------>DAG2        <----------DOF2  <---------ARR14(2)        <---------ARR14(2)<---------DOF5.7(2) ------>DOF2<-----------GT1  --------->GLK1(1)<---------ALFIN1 --------->ARR14(2)--------->MYB52(1)   aaagcagctgtgtaaaacccttctttgtctgatttcccagttcctctaacacctctgagattgcagataagcttcaacgtagtcaacggatcgtgagacc  17445100                                                                                               <-----                                                                                              <------                                                                                              <------                                       --------->ETT(1)                                       <------                                       <---------LBD16                                        <------                                       <---------ANAC46                                       <------                                     <-----------HVH21                                       --------                                    <-----------RAV1(1)                                    <---------                                    ----------->HVH21                          --------->LBD16-------                             --------->LBD16                                  --------->LBD16--------                           <---------LBD16        --------->ALFIN1            <---------HSFB2a(2)      <---------ANAC58 <------ZmHOX2a(2)    --------->SPL7                   <---------HSFB2a(2)      <---------ANAC58<---------ARR11(3)   ------>NtERF2                     <---------LBD16<-------- ------>ANAC58        --------->ARR11(3) <------NtERF2              <---------O2   <------ZmHOX2a(1) ------>ANAC58    <------ZmHOX2a(2) --------->ALFIN1    >>>>>>>>>TBF1        --------->HSFB2a(2)<----   aagaaattgctagcctttggatcagatcatcgggagatgtgtcggggacgatgtggaagaagaaatcgagacatgggttcccggaggagagaaatgtcgg  17445200 ----RAP2.3(1) ---DEAR3(1) ---RAP2.3(3) ---DREB2C(2) ---DEAR4(1)                  <---------ARR14(2)                                              ------- ---At1g77200               <---------MYB46(3)       <---------ARR14(2)                     <-------- ->RAP2.6(3)             <---------MYB46(3)          --------->ALFIN1                     <---------ARR14(2) --RAV1(1)              --------->ALFIN1      --------->ZAT14                             --------->ARR14(2) -->ETT(1)           <---------AtMYB61        <---------ZAT14                            <---------GLK1(1) ->DDF1    <---------MYB52(1) --------->ARR14(2)   <---------MYB46(3)                    --------->GLK1(1) ---HVH21 <-----------HVH21<---------AtMYB61 <---------REM1(1)              --------->At4g35610 --NtERF2 <-------GAMYB <---------AtMYB61  <---------ANAC46                 <---------At4g35610   cgagaaattctccgttagacccattggtggtggttcttcgaggtttagtgtagcggtttgggagattagagtgttttcatcggaaatatgggtttccggt  17445300                                       <------MYB46(1)                                       <------MYB83                                      <---------AtMYB61                                  --------->ANAC58                                ------>NtERF2                                <---------ATERF1(1)                               <---------DEAR3(1)                               --------->DEAR3(1)                               ----------->HVH21                             --------->LBD16                             ------>NtERF2                            <---------LBD16                         --------->ANAC58                   --------->At5g28300--------->DAG2                --------->ANAC58                 ------>ZmHOX2a(2)--------->ANAC58      ===================================HOX2a_HOX2a      <------MYB46(1)    --------->ARR14(2)             ------>ZmHOX2a(2)      <------MYB83----------->GT1<------NtERF2       <------ZmHOX2a(1)     <---------AtMYB61   <---------ARR14(2)         <---------HSFB2a(1)    <---------WOX13(1)  <---------GLK1(1)--------->ALFIN1    <---------ZAT6                     <---- -->LBD16     --------->ATHB12--------->ATERF1(1)   <---------HSFC1(2)                        <------ -LBD16      <---------YAB1<---------LBD16          --------->HSFC1(2)              <------ZmHOX2a(1)   gaatggattggtttgatgatcggtgaatttccggcgacggaaggtggaccaagaaggatcgtagtggaagaagccattgaaacagaggaaaatgcgatgg  17445400                                                                                            ------->MYC3                                                                                            <-------MYC3                                                                                           --------->TGA1a                                                                                           ==========                                                                <---------ANAC58           <---------O2                                                                <---------bZIP60(2)        --------->O2                                                                --------->O2       <---------ANAC58                                                     --------->YAB1                --------->O2                                                    <---------ATHB12 <---------ANAC46--------->ALFIN1                                                   *TSS         <---------TGA1a    <---------ANAC58                                             <---------ANAC58   --------->TGA1a    ==================                                      --------->ARR11(3)        <---------O2       <---------ANAC46                                      <---------ARR11(3)        <---------ANAC46   <---------TGA1a         <---------TOE2(3)            <---------GLK1(2)         =====================================       ---------->DOF2     ===============================================bZIP_DOF --------->TGA1a -----------------WRI1     <----------DOF2   <---------ANAC58   <---------ANAC58   <---------bZIP60(2) ---AtMYB61        <----------DOF2   <---------RVE1(1)      <------ZmHOX2a(1)      <---------O2  <---   tgatgctctcaaaggttttgactttgaagctttagagagagatttttgcttcgaatcatgtaggagacgtggcatatttctaacgacgtggccatgtgtc  17445500               <---------PCF2              ----------->TCP11(1)             --------->ZAT18          <-----------RAV1(1)          <---------ANAC46                                    <---------MYB52(1)          <---------ZAT6              <---------AHL20(1)     --------->At5g28300          --------->ALFIN1            --------->AHL20(1)     --------->LBD16    <-----------GT1                   <---------AHL20(2)    --------->TOE2(3)                     <--   <---------AHL20(2)                 --------->AHL20(2)    ----------->GT1                 <--------   --------->AHL20(2)                <---------AHL20(2)     --------------->AGL15        --------->ARR11(3) =======bZIP_DOF                     --------->AHL20(2)     <---------------AGL15        <---------ARR11(3) =======bZIP_DOF                --------->TOE2(3)           <---------ANAC46            <---------CCA1(2) =======bZIP_DOF------------>CBF<---------DAG2            --------->MYB52(1)            <---------GLK1(1) -------DOF2--------->ALFIN1 <-----------GT1         --------->AHL20(2)       <----------DOF2     ---   tttatttaactagtgtgggccaatggccatttcaccttattaaattagttaactaaaaaataccgtaaattgtaagttttctttctattgatatctttgt  17445600                                                                                                   --                                                                                                  <--                                                                                                <----                                                                                              <------                                                                                              -------                                                 <---------YAB1                              --------                                            <---------AHL20(2)                               --------                                   <-----------GT1       <---------TOE1(3)                   <-------                                 <---------AHL20(2)   <---------AHL20(2)                     --------                                --------->AHL20(2)<---------AHL20(2)                         <-------  <-----------GT1           <---------AHL20(2)  <---------AHL20(2)                        --------->AHL20(1) -------AHL20(2)          --------->ANAC55(2) <---------YAB1    <---------ARR14(2)        <---------AHL20(2) --DOF2<----------DOF2   <---------TOE2(3) <---------YAB1<---------TOE2(3) <---------ICU4 --------->AHL20(2) ------>AHL20(2)   <---------AHL20(2)     --------->AHL20(2)    --------->ARR14(2)       --------->AHL20(2)   taaattactctttttctatgttttatttatgtaattttatccatttttatttttattttaaggtagtattcgcatatttatgaccatcaaaaaaaattat  17445700                     <---------YAB1      <---------AHL20(1)                                                           <---------AHL20(2)      --------->AHL20(2)                                                          <---------AHL20(1)      <---------AHL20(2)                                                          --------->AHL20(2)      --------->AHL20(1)                                                          --------->AHL20(1) -------->DOF2     <---------AHL20(2)                                             <---------AHL20(2) -------AHL20(2)  <---------YAB1                                                 <---------AHL20(2) -----YAB1       <---------AHL20(2)           <---------AHL20(2)                 --------->AHL20(2) ---ICU4       <---------YAB1          --------->At5g28300                   --------->AHL20(2) ->ATHB1  --------->YAB1 <---------AHL20(2)   --------->AHL20(2)    <---------AHL20(2)            <-- ->AHL20(2)   <---------AHL20(2)     --------->ZAT6                --------->AHL20(2)     <---------- ->AHL20(1)   <---------AHL20(1)   >>>>>>>>>WRKY18  <---------AHL20(2)       <---------AHL20(2)  <--- --AHL20(2) <---------YAB1   <---------AHL20(2)     --------->AHL20(2)   --------->AHL20(2)  <------- ->ICU4   <---------ICU4<---------YAB1----------->GT1      ----------->RAV1(1)--------->AHL20(2) <--- --YAB1  <---------YAB1<---------AHL20(2)   --------->AHL20(2)     <---------AHL20(2) <---------ICU4   taaaagaatttattattatttttatttttattttttttgacagtaaatttatattttattccaacaaaattttttttatataaattaatttttatcttta  17445800           --------->ZAT14       -------->ATHB1       --------->ATHB12       --------->YAB1       <---------ICU4       <--------ATHB1      --------->ICU4                                                                             ----    --------->WOX13(1)                                                                           ---- -------ICU4        <---------ARR11(3)                                                           <--- -GT1 <---------ATHB12                                        --------->ATHB12                   ---- ------YAB1<---------ZAT14                                   <-------TEIL                 <---------- ---DOF2 <---------YAB1      <-----------GT1                <--------P --------->KAN4(1)  --------->TOE1(3) ------AHL20(2)     --------->ARR11(3)           --------->LBD16    <------ZmHOX2a(1)     --------->TOE2(3)   taatttcaatcattgtagtgaagatgtttttttaccacagttttgatattccgaaatacaaggttgattaggaatattggcatcaattgtatccataaca  17445900          --------->ANAC58                                                                         --          --------->ANAC58                                                                        ---          --------->ANAC46                                                                        ---     --------->ARR14(2)                --------->At4g35610                   --------->MYB52(2)   ---     <---------ARR14(2)        --------->RAP2.6(2)              ------>ZmHOX2a(1)                 --- ----->ANAC55(2)           <---------AtMYB61                  ------>ZmHOX2a(2)           --------->At4g35610 ------->GT1           --------->At4g35610              <-------GAMYB        <-----------RAV1(1) ---- ------ANAC55(2)       <---------At4g35610          ------------>AtMYB77     <---------MYB46(3) ----- ----->ANAC55(1)   <-----------GT1    --------->ANAC46  <---------At4g35610<---------MYB52(1)   ----- -----AGL15  ------->TEIL  --------->MYB59 --------->REM1(1)--------->ARR11(3) ---------->ID1   -----   tgtaacatatacacgcacatattacagcttaggtcgcaatacgctgcatcacattgacagttgatcctgcattcttcgtttgtcgcacagacatctccaa  17446000  Previous    Next  AGI:  At5g43400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G13210.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24780.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43390.1); similar to hypothetical protein OsI_005960 [Oryza sativa (indica cultivar-group)] (GB:EAY84727.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70061.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69580.1); contains InterPro domain Uncharacterized conserved protein UCP015417, vWA (InterPro:IPR011205) Range:  from: 17443172    to: 17445451    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g43401.1    Description:  similar to endopeptidase inhibitor [Arabidopsis thaliana] (TAIR:AT3G45093.1) Range:  from: 17445810    to: 17446325    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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