Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ICU4            --------->YAB1           <---------ATHB12 ------>GLK1(1)                                                                              <------ZmHOX2a(2) ----->ARR14(2)                                 --------->YAB1                              --------- ------GLK1(2)                            --------->YAB1                                   <---------At4g35610 ------ARR14(2)                           --------->TOE2(3)                                --------->At4g35610 -->HSFB2a(2)                      <---------GLK1(2)                <----------DOF2<----------DOF2 ---HSFB2a(2)          --------->YAB1  <-----------GT1    ---------->DOF2         <---------DAG2 --GT1     --------->ICU4    <----------DOF2 --------->YAB1--------->DAG2   <---------bZIP60(2)   attcccaattgcaataatcccaaaatcaaaactttcagattttaccataatcaaaacaaaaaaagctaacctttggtgacttcgcctttcttcagatcaa  17212900                                                                                     <---------ATHB12                                                        --------->YAB1               --------->ICU4                                                   <<<<<<<<<ARR2              ---------->DOF2 -------     <---------MYB52(2)                            <---------ATHB12          <---------AHL20(2)    --------->ANAC58--------->TOE1(3)         --------->YAB1                 --------->AHL20(2)   ---    --------->ANAC58--------->TOE2(3)      --------->WOX13(1)          ----------->GT1-------->HAHB4 >AGP1 <-----------GT1                  <---------ARR11(1)        --------->MYB52(1) <---------YAB1   cgatgtaagtaacctcttcaaaccctaatttctgaaattccaaatctatcacaatcaaacataaaacaaaacagagtaataaaagaaatgattctataaa  17213000                                                                         <-------GAMYB                                                                        <---------MYB46(3)                                                                        <---------DEAR3(2)                                                                       <---------At1g77200                                                                       <---------DEAR3(1)                                                                       <---------DREB2C(2)                                                                       <---------DEAR4(1)                                                                      --------->ATERF1(1)                                                                     <-----------HVH21                                                                    <---------ANAC46                                                                    --------->DEAR3(1)                                                                    <---------DEAR3(1)       -------->P                                                  <------NtERF2       ------>MYB46(1)                               ----------->HVH21<------NtERF2       ------>MYB83                        <-----------ARR10<----------DOF2     <---------MYB59                       --------->ARR11(3)     ------>NtERF2     --------->AtMYB61     ------>ZmHOX2a(2)<------ZmHOX2a(2)     --------->LBD16     --------->MYB46(3)   <---------At4g35610       <-----------HVH21------>NtERF2           <-------  ================================HOX2a_HOX2a------>ZmHOX2a(2)   --------->ANAC46         --------->YAB1  <------ZmHOX2a(1)      <---------AGP1    <---------ARR11(3)    <---------LBD16          --------->REM1(1) --->DOF2            --------->YAB1        --------->ARR14(2)    --------->LBD16 <---------ARR11(3) ------->DOF2       --------->ICU4         <---------ARR14(2)   <---------LBD16  --------->ARR11(3)   gaaaggaccaacctttggagcaatgttgatctgataaacaagaccgatcttctctgtgacctctttcccggcgtcggtggaaagatgttccttcatcatg  17213100                                                     <---------ANAC46                                                   <---------ZAT14                                                   --------->REM1(2)                                                   --------->ZAT14                          <---------ARR14(2)      --------->ALFIN1                          --------->ARR14(2)    <---------ANAC46                       <---------ANAC46       --------->ZAT18             --------->ARR14(2)               <---------ZAT14             <---------ARR14(2)     --------->AHL20(2)    <---------WOX13(1) <---------ANAC58       --------->ZAT14  --------->ATHB12     <------MYB83 <---------AHL20(2) <---------ZAT6     ----------->GT1  <---------ICU4       <---------ANAC58     <---------LBD16              --------->DAG2         <---- --------->ICU4        <------MYB46(1) <---------YAB1----------->GT1   ---------->DOF2        <------ <---------YAB1       --------->MYB59  <---------AHL20(2)  --------->ARR11(3)                 <------ --ICU4  <---------At4g35610 --------->ANAC46<---------ANAC46 <---------LBD16    --------->ATHB12   tccatgattgcatcggatttgagttgggtattcgccatttttttattgcgcagtgtagtgaaatctcggagaagaaaggtgaaagattggatttttaagg  17213200                               ----------->HVH21                             --------->ANAC55(2)                             <---------ANAC58                             <---------O2                             <---------ANAC58                             <---------ANAC55(2)                             --------->TGA1a                             <---------TGA1a                             <---------bZIP60(2)                             <---------bZIP60(1)                             --------->bZIP60(1)      <------MYB46(1)        <---------TGA2(1)      <------MYB83           <---------ANAC46      <---------ANAC55(2)    --------->O2      --------->ANAC55(2)    <---------ANAC55(1)     --------->MYB59       <---------TGA2(2)     --------->MYB111(1)  ----------->HVH21                 *TSS                                   <-     --------->MYB46(2)   ----------->TGA1               <---------ARR11(3)                <---------ANAC58    <---------MYB55(1)  --------->At4g35610              --------->ARR11(3)           --------->ARR14(2) --ZmHOX2a(1)     =====================bZIP_DOF   --------->ATHB12           --------->ANAC58  <----- ---TOE2(3)       ---------->DOF2  ------>ZmHOX2a(2)   <---------TOE2(3)     --------->ANAC58 ------- ---TOE1(3)   <----------ID1----------->STF1     --------->ICU4             <---------ZAT18<---------ANAC58   atggagttaggtaatagagacaaaggaggtgacgtgatcgataagtatggaaagattgagatttttgttagagactggcacgcttccctatttgcttatt  17213300                                                                <---------WRKY18(1)      <---------AHL20(2)                                                               --------->WRKY12         <---------AHL20(2)                                                <---------At4g35610                     --------->AHL20(2)       <---------ICU4                      --------->ARR11(3)  --------->WRKY45        --------->ICU4       --------->ATHB12        --------------->AGL15           --------->WRKY38(1) --------->At5g28300      --------->ICU4           <<<<<<<<<<<<<AGL25           <---------YAB1        ----------->GT1      <---------YAB1           <---------------AGL15      <---------ICU4       ----------->RAV1(1) ----------GT1    <-----------GT1    <---------LBD16      --------->YAB1       --------->MYB52(1) ----YAB1<---------YAB1       <-----------------AGL2     --------->ICU4     ------>MYB46(1)    <----- -->KAN4(2)     <------------------------ANAC81 --------->At4g35610         ------>MYB83<---------AHL20(1)   cttacctcatgattactgtttttctatctgtttctattttggggagatttagcagactaattatgttgaccagaaaccaaacaacagtaatttttttttt  17213400                                                           <---------DAG2                                                           <----------DOF2                                                 <---------YAB1                                               --------->YAB1                                               --------->AHL20(2)                                              --------->ICU4    --------->HSFB2a(2)                       <---------YAB1        --------->YAB1    <---------HSFB2a(2)          <---------MYB52(1)      ------>MYB46(1)  --------->At4g35610   ------>ZmHOX2a(1)--------------->AGL15     <---------ATHB12                -- ------GT1           ---------->ID1--------->MYB52(2)    ------>MYB83 <---------YAB1   ------->TEIL<-   catcttctgcaaattgcgattttgtcctaatatttgttagttcccctaattataaaaccaactttttcaatgaagattgaataactatgtatgtattgta  17213500               <---------ANAC58               --------->ANAC55(2)       <---------ANAC58               <---------ANAC55(2)----------->ARR10               <---------ANAC58 <---------ANAC46             <-----------GT1  <------MYB46(1)    --------->ANAC58          <---------ANAC58    --------->ANAC58          <------MYB83<----------DOF2                             ----------->GT1   --------->DAG2             <---------ANAC46        --------->YAB1              <------ZmHOX2a(1)  ---------->DOF2             <---------ANAC58     --------->WOX13(1)--------------->AtSPL8 ------->AHL20(2)        <---------AHL20(2) ----------->HVH21 <----------DOF2    <----------ID1   <-- --------AHL20(2)     ----------->GT1    <---------ANAC58---------->DOF2      ---------->DOF2   -----   tttaaaaagcaaatgttacttatctagttatttggtgtgatttgctttgacatcaattagaaagctttgggacagtacttaaaaggactagtaaaaaaaa  17213600                                                     <---------TOE1(2)         --------->ICU4     <---------MYB46(3)   --------->HSFB2a(2)       ---------->DOF2   <------ZmHOX2a(1)       <---------HSFB2a(2)   >>>>>>>>>TBF1      <------ZmHOX2a(1) <---------MYB46(3)                                          < --------ID1       <-----------RAV1(2)<---------MYB52(1)                           <----------DOF2 <- ---->MYB52(1)     <---------LBD16  <---------YAB1   <---------TOE2(2)     <----------DOF2 <---------SPL7   acgaagaagaaaagattagtttcaggaggattgttgttctgtttgttcgttctcgcaggtttgtgtttgatttcatgcttttgggcttttggccgtatgg  17213700                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                  --------->ATHB12                                             <-------TEIL                                          <---------ANAC58             <-----------RAV1(1)          <---------ANAC46 <---------ANAC55(2)      <---------ANAC58              --------->ALFIN1<---------WOX13(1)                    <----------      <---------ANAC58           --------->DAG2 <---------WOX13(1)                    <--------------      <---------ANAC46          --------->DAG2 <------------CBF                       ------>ZmHOX2a(1) ----------DOF2                ---------->DOF2--------->ATHB12         --------->YAB1--------->TOE2(3) --------DAG2--------->ICU4<---------ZAT6 <---------ANAC58 <---------ANAC46 <----------DOF2  <-------   gccttttgccttgtaatgttgtatttttagtggaaaaggtgtttgcgttcattgatttattatgtgaaaccgattatacttttatttcctaaatgttgta  17213800  Previous    Next  AGI:  At5g42890.1    Description:  sterol carrier protein 2 (SCP-2) family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN82147.1); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain Sterol-binding; (InterPro:IPR003033); contains InterPro domain Sterol-binding-like (InterPro:IPR016083) Range:  from: 17211425    to: 17213260    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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