Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------YAB1                                                    --------->YAB1                                                    -------->ATHB1                         <---------ANAC55(2)        <---------ICU4                              -----                         <---------ANAC58          <---------AHL20(2)                           -----                         <---------ANAC46          <---------YAB1                               <----                         <---------ANAC58          --------->ICU4                     ----------->RAV1(1)                         ----------->GT1           --------->AHL20(2)                ----------->HVH21                    <---------ICU4                 --------->AHL20(1)               <---------At4g35610                   <---------ATHB12          ----------->GT1        <----------DOF2 --------->At4g35610               --------->ZAT14            ----------->TGA1  ---------->DOF2         <------NtERF2   agattaccttgtatttcttcactcatttcgtaaaattttgacttatgacgaaaattattattcaaagcctctttgtttcaattggcagcgacatcgtcct  16671700                               --------->LBD16                              --------------->AGL15                    <---------AHL20(2)                             ----------------->AGL1                    --------->AHL20(2)          <---------ANAC58   ----------------->AGL3                   --------->AHL20(2)          <---------ANAC58<---------SPL7                      <---------YAB1                     <<<<       --------->DAG2    <---------ANAC58                   --------->YAB1        <---------ANAC58      ---------->DOF2    <---------ANAC58                   <---------ICU4        <---------ANAC58  < ->ZmHOX2a(1) <---------ANAC46----------------->AGL1       --------->ICU4         --------->ANAC55(2) ---->At4g35610  <---------ARR14(2)    <------ZmHOX2a(1) <---------ICU4--------->AHL20(1)    <-------TEIL -----At4g35610  --------->ARR14(2)  <---------TOE2(3) <---------TOE2(3)          <---------ANAC55(2)   ctccctcataaagcttgtgtatatgtgtcgttccgaaataaggaaccctagaagtttaagaattatggtcaattttattagattacgtccccaaattcat  16671800                                                                                       >>>>>>>>>ARR2                                                                                       >>>>>>>>>ARR1                                                                                       >>>>>>>>>ARR2                                                                                       <------------CBF                                                                                       >>>>>>>>>ARR1                                                                                      <------ZmHOX2a(1)                                                                                     <---------YAB1                                                                                    <---------TOE2(3)                                                                            --------->ANAC58                    <----------DOF2                                         --------->ANAC58             <---------DAG2                       ------>MYB46(1)        ------------>CBF             <----------DOF2                      --------->MYB52(1)    --------->ANAC58    ---------            <---------DAG2                        ------>MYB83          --------->ANAC46    <-------- <<<<<NAM<-----------GT1 XXXXXXXXXXXXXXXXXXXX>MIR171B/C                 --------->ANAC58    --------- ----------DOF2 ---------->ID1           ----------->RAV1(2)  <----------DOF2<---------ATHB12  ------   ccctttgtgttttaccttttcgcttttgagccataacaacatcgtctgaaccaagcggctcatgcttttgttccacacaatcaatttaggattgtccact  16671900                     <----------DOF2                  <---------ATHB12                <---------At4g35610                     <---------GLK1(2) >ZAT14       --------->ZAT18                     ------->GAMYB                                   --- -ZAT18       <---------ZAT18                   -------->P                                        --- >ZAT18       --------->ZAT14                  ------->GAMYB  <----------DOF2                    <--- --->ANAC46   <---------ZAT14                 --------->MYB46(3)   <----------DOF2------------>CBF<--   ctattatctaatccagtccactgatttatgggttttatttgggccttaacaacccaaaaattctctttcctttttttcaaataaaccaatagctatctca  16672000                                 --------------->AGL15                                 <---------------AGL15                                ----------------->AGL3                             --------->At5g28300                             <---------SPL7                           --------->ANAC55(1)                           --------------->AtSPL8                           --------->ANAC58                           --------->ANAC46                     --------->YAB1                           --------->ANAC58                    <---------ATHB51  ----------->GT1        <---------ALFIN1                      <---------ATHB12 ------>ARR11(3)        <---------REM1(2)          ---------->DOF2                 <----------DOF2 ------>ARR14(2)      ----------->HVH21          --------->ANAC58                <---------ATHB12 ------CCA1(2)       --------->ZAT18             --------->ANAC58      <------------CBF -------ARR14(2)    --------->ALFIN1       --------->ALFIN1------------>CBF  ------------>CBF   tatctggtttatattgcagagagtgcgacacggtaccatttagaggtgagcccgaaagaagcccaataatgtgtattgggccaatcttttttttgttttt  16672100                                                                                             <-------                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                          <---------ANAC46                                                                                         --------->ATERF1(1)                                                                                         <------NtERF2                                                                                        <---------RAP2.3(1)                                                                                        <---------ATERF1(1)                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                       <---------DEAR3(1)                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2<-                                                                                     ------>NtERF2<--                                                                                     <---------ATERF1(1)                                                                                    <---------DEAR3(1)                           <----------DOF2                                          --------->ETT(2)                         <---------ATHB12                                           ----------->HVH21                     ------------>CBF              <-----------GT1             --------->CCA1(2)  <--              <---------WRKY12           *TSS<---------AHL20(2)        <---------HSFB2a(2)<---------DEAR3(1)            <-----------HVH21        <------------CBF--------->ZAT6    --------->HSFB2a(2)--------->DEAR3(1)   gtttttgttttttgggtcaaatggccaatcttttttttgtattgtgttttattttacactcgttcgtcttcgtctagagagagatggcgacggcgtcgtt  16672200                           ------->TEIL                                             <----------DOF2              <-----------HVH21                                                     <---------DAG2            <---------At4g35610                                               --------->bZIP60(1)            --------->At4g35610      --------->At4g35610                      <---------bZIP60(1)  --    <---------ARR14(2)   <---------SPL7                                 <---------WRKY12           --    --------->ARR14(2)  --------->ANAC55(2)                            <---------MYB52(1)          --    <---------GLK1(2)   <---------ANAC58                              --------->LBD16         ------- --ANAC46<---------At4g35610   ---------->DOF2                  <---------DAG2<---------TGA2(1)    <- --------ANAC46         <---------ANAC55(2)                     <----------DOF2<-----------TGA1    <- -------TOE2(3)         <---------ANAC58                --------->ARR11(3)    --------->TGA2(1)<----- -------AtMYB61        --------------->AtSPL3           <---------ARR11(3)   <-----------STF1 <------   taggtggattctgcagcttcacagagacgtaccaaaagctgctcgattctatgctcaaggtctcgacttttccgtcaatgtcgtcactttacgctgggct  16672300                                                                    -------->ATHB1                                                                    --------->ATHB12 ------->ZAT2                                                       --------->ATHB51 ------->At4g35610       <---------ARR11(3)                         <---------ICU4 ------->GLK1(1)    --------->STY1(2)                    <----------DOF2 -->At4g35610       <---------STY1(2)                  ------>ZmHOX2a(1)          --------->ANAC46 --------ZAT2      --------->ANAC58              <-----------GT1   --------->ICU4 --------->ANAC58 --------At4g35610 --------->ANAC58       <---------TOE2(2)        <---------YAB1--------->ZAT18 -----CDC5      <---------ATHB12          <---------TOE1(2)     ------------>ATHB5--------->ANAC58 ---At4g35610 ------>ZmHOX2a(1)          ------>ZmHOX2a(1)    ---------->ID1---------->DOF2      ----   gagctccattctggtcctatcaagctagctcttatgcaatctcctaggttttatctcctcttttgttccattattgctcaaagcacacaacctgtttgat  16672400                                               --------->LBD16                                              --------->HSFB2a(2)                                              <---------HSFB2a(2)                                             <-----------------AGL1                                             <---------LBD16                                             <-----------------AG                                             <-----------------AGL2                                             ----------------->AGL1                                     --------->YAB1          --------->YAB1           --------->AHL20(2)    <----------DOF2                            <         <---------ATHB12       --------->TOE2(3)<---------ARR14(2)                           -------    --------->TOE2(3)      --------->KAN4(2)--------->MYB52(1)<---------ZAT6           <---------ARR11(3) ----->ATHB12   <----------DOF2 --------->TOE1(3)--------->ARR14(2)                    --------->ARR11(3)   catttgcctcaatgaaaactttctgagtttattcccttaaaataacttccggatttggacttttgtgttacactgtttatcgctgagaagacctctcaaa  16672500                      <-----------RAV1(1)                    --------->YAB1                    <---------ICU4                   <---------ATHB12            --------->At4g35610            <---------At4g35610            --------->LBD16               <---------ICU4           --------->ANAC46<---------ANAC46        <-----------GT1   --------->At4g35610    <----------DOF2--------->ICU4    <---------ARR14(2)                                             < ----------DOF2  --------->WOX13(1)  --------->ARR14(2)            ----------->HVH21               <- --->DOF2 <---------LBD16 <---------At4g35610                 <-----------HVH21----------->RAV1(1) <-   gactttcttttttccgcagcaatcatgttgctgagaagggatactcatcgcttctatcgttcacagtcactgacattaatacaacagtgactaaacttat  16672600  Previous    Next  AGI:  At5g41640.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24388.1); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462) Range:  from: 16670565    to: 16671863    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g41650.1    Description:  lactoylglutathione lyase family protein / glyoxalase I family protein. similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT1G64185.1); similar to unknown [Populus trichocarpa] (GB:ABK93252.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360) Range:  from: 16672141    to: 16673038    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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