Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ------>NtERF2                          <------NtERF2                         --------->ZAT18                    --------->DAG2                  <----------DOF2                    ---------->DOF2 --------->REM1(1)    <---------YAB1                   ---------->DOF2 <-------TEIL--------->MYB46(3)                --------->YAB1 <---------TOE1(3)   <---------DAG2                    --------->AtMYB61 ----->ICU4  ------>ZmHOX2a(1) <---------TOE2(3)<---------ALFIN1                  <------ZmHOX2a(1)   cgatgaagacccatcctagcataaaggcggactaaggtacaacaaggtgaccaccttttatcacagatggatttttgaagttcaggaccatcactcgctt  16671500                                   --------->YAB1                                   <--------HAHB4                      <-------TEIL--------->ICU4                   <---------RVE1(1)       <---------------AGL15                  --------->ARR14(2)       --------------->AGL15                  --------->ARR11(3) <---------YAB1          --------->AHL20(2) --------->YAB1                  <---------ARR11(3)--------->TOE2(3)        <---------AHL20(2) <---------AHL20(2)                ----------->ARR10 <---------YAB1       <------------MYB.PH3(1)  --------->AHL20(2)   ctgtagtatcgaacccctaagatattcatttaagttatcattaatctctatctggtaaccgatttaaaaacaaatctcttaattatataagaagctaaga  16671600                                                      <---------YAB1                                                    <---------ICU4                                                    --------->YAB1                         ----------->GT1            -------->ATHB1                              -----                         <---------ANAC58          <---------AHL20(2)                           <----                         <---------ANAC55(2)       --------->AHL20(1)                           -----                         <---------ANAC58          --------->AHL20(2)                 ----------->RAV1(1)                         <---------ANAC46          --------->ICU4                    ----------->HVH21                    <---------ICU4                 <---------YAB1                   <------NtERF2                   <---------ATHB12          ----------->GT1        <----------DOF2 --------->At4g35610               --------->ZAT14            ----------->TGA1  ---------->DOF2         <---------At4g35610   agattaccttgtatttcttcactcatttcgtaaaattttgacttatgacgaaaattattattcaaagcctctttgtttcaattggcagcgacatcgtcct  16671700                               --------->LBD16                              ----------------->AGL1                   <---------AHL20(2)                             ----------------->AGL3                    --------->AHL20(2)          <---------ANAC58   ----------------->AGL1                   --------->AHL20(2)          <---------ANAC58<---------SPL7                      <---------YAB1                     <<<<       --------->DAG2    <---------ANAC58                   <---------ICU4        <---------ANAC58      ---------->DOF2    <---------ANAC58                   --------->YAB1        --------->ANAC55(2) ->ZmHOX2a(1) <---------ANAC46--------------->AGL15        --------->ICU4         <---------ANAC55(2) -----At4g35610  --------->ARR14(2)    <------ZmHOX2a(1) <---------ICU4--------->AHL20(1)    <-------TEIL ---->At4g35610  <---------ARR14(2)  <---------TOE2(3) <---------TOE2(3)          <---------ANAC58  <   ctccctcataaagcttgtgtatatgtgtcgttccgaaataaggaaccctagaagtttaagaattatggtcaattttattagattacgtccccaaattcat  16671800                                                                                       >>>>>>>>>ARR2                                                                                       >>>>>>>>>ARR1                                                                                       >>>>>>>>>ARR2                                                                                       >>>>>>>>>ARR1                                                                                       <------------CBF                                                                                      <------ZmHOX2a(1)                                                                                     <---------YAB1                                                                                    <---------TOE2(3)                                                                            --------->ANAC58                    <----------DOF2                                         --------->ANAC58             <----------DOF2                      --------->MYB52(1)     ------------>CBF             <---------DAG2                       ------>MYB46(1)       --------->ANAC58    <--------            <---------DAG2                        ------>MYB83          --------->ANAC58    --------- <<<<<NAM<-----------GT1 XXXXXXXXXXXXXXXXXXXX>MIR171B/C                 --------->ANAC46    --------- ----------DOF2 ---------->ID1           ----------->RAV1(2)  <----------DOF2<---------ATHB12  ------   ccctttgtgttttaccttttcgcttttgagccataacaacatcgtctgaaccaagcggctcatgcttttgttccacacaatcaatttaggattgtccact  16671900                     <----------DOF2                  <---------ATHB12                <---------At4g35610                     <---------GLK1(2) -ZAT18       --------->ZAT14                     ------->GAMYB                                   <-- >ZAT14       <---------ZAT18                   -------->P                                        --- >ZAT18       --------->ZAT18                  ------->GAMYB  <----------DOF2                    <--- --->ANAC46   <---------ZAT14                 --------->MYB46(3)   <----------DOF2------------>CBF---   ctattatctaatccagtccactgatttatgggttttatttgggccttaacaacccaaaaattctctttcctttttttcaaataaaccaatagctatctca  16672000                                 <---------------AGL15                                 --------------->AGL15                                ----------------->AGL3                             --------->At5g28300                             <---------SPL7                           --------->ANAC58                           --------->ANAC55(1)                           --------->ANAC46                           --------->ANAC58                     --------->YAB1                           --------------->AtSPL8              <---------ATHB51  ----------->GT1        <---------ALFIN1                      <---------ATHB12 -------ARR14(2)        <---------REM1(2)          ---------->DOF2                 <----------DOF2 ------>ARR11(3)      ----------->HVH21          --------->ANAC58                <---------ATHB12 ------CCA1(2)       --------->ZAT18             --------->ANAC58      <------------CBF ------>ARR14(2)    --------->ALFIN1       --------->ALFIN1------------>CBF  ------------>CBF   tatctggtttatattgcagagagtgcgacacggtaccatttagaggtgagcccgaaagaagcccaataatgtgtattgggccaatcttttttttgttttt  16672100                                                                                             <-------                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                          <---------DEAR3(1)                                                                                         <------NtERF2                                                                                         --------->ATERF1(1)                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                                                        <---------RAP2.3(1)                                                                                       --------->DEAR3(1)                                                                                       <---------DEAR3(1)                                                                                      <------NtERF2<-                                                                                      --------->ATERF1(1)                                                                                     ------>NtERF2<--                                                                                     <---------ATERF1(1)                                                                                    ----------->HVH21                           <----------DOF2                                          --------->ETT(2)                         <---------ATHB12                                           <---------DEAR3(1)                     ------------>CBF              <-----------GT1             --------->CCA1(2)  <--              <---------WRKY12           *TSS<---------AHL20(2)        <---------HSFB2a(2)<---------ANAC46            <-----------HVH21        <------------CBF--------->ZAT6    --------->HSFB2a(2)--------->DEAR3(1)   gtttttgttttttgggtcaaatggccaatcttttttttgtattgtgttttattttacactcgttcgtcttcgtctagagagagatggcgacggcgtcgtt  16672200                           ------->TEIL                                             <---------DAG2              <-----------HVH21                                                     <----------DOF2            <---------At4g35610                                               --------->TGA2(1)            --------->At4g35610      --------->At4g35610                      <---------TGA2(1)    --    <---------GLK1(2)    <---------SPL7                                 <---------WRKY12           --    <---------ARR14(2)  <---------ANAC58                               <---------MYB52(1)          <-    --------->ARR14(2)  --------->ANAC55(2)                           --------->LBD16         ------- --ANAC46<---------At4g35610   ---------->DOF2                  <----------DOF2<-----------TGA1<----- --------ANAC46         <---------ANAC58                        <---------DAG2--------->bZIP60(1)  <- -------TOE2(3)         <---------ANAC55(2)             <---------ARR11(3)    <---------bZIP60(1)  -- -------AtMYB61        --------------->AtSPL3           --------->ARR11(3)   <-----------STF1 <------   taggtggattctgcagcttcacagagacgtaccaaaagctgctcgattctatgctcaaggtctcgacttttccgtcaatgtcgtcactttacgctgggct  16672300                                                                    --------->ATHB51                                                                    --------->ATHB12 ------->At4g35610                                                  -------->ATHB1 ------->GLK1(1)         <---------ARR11(3)                         <---------ICU4 --------At4g35610  <---------STY1(2)                    <----------DOF2 -->At4g35610       --------->STY1(2)                  ------>ZmHOX2a(1)          --------->ANAC46 -----CDC5         --------->ANAC58              <-----------GT1   --------->ICU4 --------->ANAC58 --------ZAT2      --------->ANAC58       <---------TOE2(2)        <---------YAB1--------->ZAT18 ------->ZAT2   <---------ATHB12          <---------TOE1(2)     ------------>ATHB5--------->ANAC58 ---At4g35610 ------>ZmHOX2a(1)          ------>ZmHOX2a(1)    ---------->ID1---------->DOF2      ----   gagctccattctggtcctatcaagctagctcttatgcaatctcctaggttttatctcctcttttgttccattattgctcaaagcacacaacctgtttgat  16672400  Previous    Next  AGI:  At5g41640.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24388.1); contains InterPro domain Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462) Range:  from: 16670565    to: 16671863    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g41650.1    Description:  lactoylglutathione lyase family protein / glyoxalase I family protein. similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT1G64185.1); similar to unknown [Populus trichocarpa] (GB:ABK93252.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360) Range:  from: 16672141    to: 16673038    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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