AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                 --------->REM1(2)
                                                --------->ALFIN1
                                               <-------MYC3
                                               ------->MYC3
                                               ------->MYC2
                                               <-------MYC2
                                               <-------PIF5
                                               <-------MYC4
                                               ------->MYC4
                                               ------->PIF5
                                              --------->PIF3(3)
                                              --------->O2
                                              <---------ANAC46
                                              <<<<<<<<<<HY5
                                              <---------TGA1a
                                              <---------PIF3(3)
                                              --------->TGA1a
                                              <---------O2
                                             ------>NtERF2
                                            <---------ALFIN1                       ----------->HVH21
                                          ----------------->PIF3(1)            --------->CCA1(2)
                                         --------->ANAC58                     --------->ARR14(2)
                                         --------->ANAC58                     <---------GLK1(2)
                --------->YAB1           --------->ANAC46               <------MYB83--------->MYB52(1)
               <---------ATHB12         --------->SPL7                 <---------MYB46(3)   --------
              ------>MYB83              <---------ZAT18                <---------DEAR3(1)   <-------
              ------>MYB46(1)          --------->ALFIN1    --------->LBD16    <---------ARR11(3)
             --------->WOX13(1)       <---------SPL7       <---------At4g35610--------->ARR11(3)
         ===============================================MYC_MYB        <---------DREB2C(2)  <-------
         ------->GAMYB               <---------ANAC58      ------>NtERF2<---------DEAR3(2)  --------
   --------->TOE2(3)                 <---------ANAC46     --------->DEAR3(1)  <---------ARR14(2)
--------DOF2--------->AtMYB61        <---------ANAC58   <---------ATERF1(1) ----------->ARR10   ----
---ZAT18--------->MYB46(3)         <---------At5g28300 --------->AtMYB61<------MYB46(1)    <--------
 
cttttgcctcaacgaccaatcaaacgaagtgattttgctaccgtgcgccacgtggagacctccgccgattacagtcggtgagatactcgacggagaatct  16554700
                                  <---------SPL7
                              --------->GLK1(1)
                           --------->LBD16
                          --------->ANAC46
                         <---------LBD16
                       ------>ZmHOX2a(2)
                      --------->CCA1(2)
                      <------ZmHOX2a(2)
                     --------->ARR11(3)
                     --------->AGP1
                     <---------ARR14(2)
                     <---------ARR11(3)
                     --------->ARR14(2)
->GLK1(2)            <---------AGP1 --------->SPL7
----ARR10           <---------CCA1(2)                                        ---------->DOF2
--ARR14(2)        ------>ZmHOX2a(1)--------->MYB52(1)              --------->GLK1(2)
->ARR14(2)        =====================HOX2a_HOX2a         <---------HSFB2a(2)
----->ETT(2)  <---------ARR14(2)<------ZmHOX2a(2)      --------->ARR14(2)  <---------YAB1
-GLK1(2)      --------->GLK1(2) <---------------AtSPL3 <---------ARR14(2)  <---------TOE2(3)    ----
 
cgaccgttcaattgaagaatcctagatctacggagatcgaacggctcgaactgcgacgaattcgagagagaatcgattaagaaagactcgattccatagt  16554800
                                                            --------->SPL1(2)
                                                            --------->SPL7
                                                          <---------SPL7
                                        ------>ZmHOX2a(2)--------->LBD16
                                        =================================HOX2a_HOX2a
                                  <---------ANAC58  <---------GLK1(1)
                                  --------->ANAC55(2)  <---------ANAC46
                                  <---------ANAC46<------MYB46(1)
                                  <------NtERF2  --------->MYB59
                                <---------ANAC46 --------->MYB46(2)--------->ARR11(3)
                                <---------ANAC58 --------->MYB111(1)--------->CCA1(2)
                                <---------ANAC58<---------MYB55(1) --------->ARR14(2)
                             <---------DEAR3(1) <--------P<---------MYB52(1)
                      ------->TEIL<---------ANAC55(2)  <---------LBD16
                   --------->ANAC58   <---------ARR11(3)--------->HSFB2a(2)                 <-------
                   --------->ANAC58   --------->ARR11(3)<---------HSFB2a(2)   --------->MYB52(1) <--
    <-------TEIL<------ZmHOX2a(2) <---------ANAC58<------MYB83     <---------ARR14(2)     <---------ARR14(2)
----->ARR11(3) --------->ARR11(3)------>NtERF2 <---------MYB52(1) <------ZmHOX2a(1)       --------->ARR14(2)
 
atctagattcatcgatgagatcacgaacatcgaaggcgcgtgatctagcaggtaggtttccggtacggaggatatagagaagaacggagaacaaatcggg  16554900
                                                                                               -----
                                                        --------->LBD16                     <-------TEIL
                                                        ------>NtERF2                      ---------
                                                       <---------RAP2.6(2)                 ---------
                                                      <---------LBD16                      ---------
                                                    <---------ARR14(2)                    --------->ARR14(2)
       --------->ANAC46                        <---------ARR14(2)                 <---------ANAC46
       --------->ANAC58                  <------ZmHOX2a(1)                        ------------------
    <---------ETT(2)                  --------->CCA1(2)<---------ANAC46        <---------MYB52(1) <-
   <------ZmHOX2a(2)               <---------TOE2(3)--------->ARR14(2)    <---------ANAC58--------->ARR11(1)
<---------YAB1              <---------ANAC58   --------->ARR14(2)         <---------ANAC58<---------GLK1(2)
--LBD16--------->ANAC58     <---------ANAC46   --------->GLK1(2)   <---------TOE2(3)      <---------ARR14(2)
----ZmHOX2a(2)              <---------ANAC58  <---------GLK1(2)    <---------TOE1(3)     <---------HSFB2a(1)
 
atcacgatcgacgaaacgagttgtctcagtagcgagttgagataggagagaatcggttccggctaggcttaaggtttgcttcgttgtttgaaagattcgg  16555000
 ------>NtERF2
----------->HVH21
--------->DEAR3(1)
->NtERF2                           --------->ARR14(2)
>CCA1(2)                           <---------ARR14(2)           --------->At4g35610
>ARR14(1)                  --------->YAB1              --------->ANAC58        <---------DAG2
>GLK1(2)                  <-------TEIL            --------->TOE1(2)            <----------DOF2
--->WRI1           --------->TOE1(2)            <-------TEIL  --------->YAB1 <----------------------
--------ATERF1(1) <---------HSFB2a(1)------>ZmHOX2a(2) --------->ANAC58    ---------->ID1
 
cctccgacgttgatggagacaacgttcgattcatgagggatcgtcggaaaattcatacgagcaaatcagaagacgttcttcgcttttttttttttttttt  16555100
                                                                                              <-----
                                                                                     --------->ALFIN1
                                                                                   <---------ANAC46
                                                                                 <---------ZAT14
       <---------YAB1                                   <---------ANAC58         --------->ZAT14
     <------ZmHOX2a(1)                                  <---------ANAC46      --------->At4g35610
  <------NtERF2 ----------->GT1                         <---------ANAC58 --------->ANAC58    -------
  <---------At4g35610         *TSS                    <-----------GT1    --------->ANAC46    <------
--ANAC81--------->YAB1  ----------->GT1     <------ZmHOX2a(1)            --------->ANAC58  ---------
 
ttggcagaggatgataagacggataaacagtgaaacttcagagaagaggaacagtttttacttgtacaaggctaacacggccactgaagtggatgagatc  16555200
                                                          <---------ANAC58
   --------->YAB1        <---------AHL20(2)               <---------ANAC58
  <---------ATHB12    ----------->GT1                     <---------ANAC46
-ZmHOX2a(2)      <---------ANAC58              --------->GLK1(1)
-->ARR11(3)      <---------ANAC58             <---------ARR14(2)
---ARR11(3)      <---------ANAC46             --------->ARR14(2)    --------->TOE2(3)           ----
-->ARR10   ------------>CBF                <---------ANAC46   --------->YAB1 <-------TEIL     ------
 
atcaaatcaaaacgaacaatgcgtttagtaaattttggctattgagacggatatgtacaatgcgtttataatctaaacgatgcatatagccttcaagaaa  16555300
                                                                                   --------------->AtSPL8
                                                                                  <---------ICU4
                                                                                 --------->ICU4
                                                                                 <---------ATHB12
               --------->MYB52(1)                                              --------->YAB1
     <---------MYB59                                                      <------MYB46(1)        ---
   --------->MYB52(1)                                                     <------MYB83 --------->ZAT18
  <-----------GT1 ----------->GT1                                        --------->MYB59       <----
------->GT1  --------->MYB46(3)                                     --------->MYB59<---------------AtSPL8
---->DOF2<---------ATHB12    <---------MYB52(1)       ---------->DOF2  <---------MYB52(1)      <----
 
agaaattaccgaatcaataaccggtataaaccggtaagagagacttatttgaaattgaaaagactaacaattcggttcggtctaataatgtacacaaacg  16555400
                                                                                  <---------YAB1
       --------->AHL20(2)                                                        <---------ARR11(3)
  --------->SPL7        ---------->DOF2                                         --------->YAB1
<-----------HVH21--------->At4g35610                                           --------->ICU4
------>SPL7--------->AHL20(2)      ----------->GT1       ----------->GT1       <---------YAB1
-------HVH21   <-----------RAV1(2) <----------ID1<-----------GT1             --------->YAB1
-----SPL7  <---------AHL20(2)  ---------->DOF2<---------GLK1(1)  --------->At4g35610         -------
 
tccggtccgataaattaaacaggtgaacaaagcacaaagggagaaatagatttcacagttgagttataagcagagataattcatgatcatatacaataaa  16555500
                                      <------NtERF2
                                     --------->ANAC46
                                     --------->ANAC58
                                     ------>NtERF2
                                     --------->ANAC58         <---------YAB1
                                    <---------ATERF1(2)     <---------ICU4
                                    --------->ATERF1(2)     --------->YAB1
                               <---------ANAC58            <---------YAB1
                               <---------ANAC58          --------->YAB1
                         <---------AGP1                  <---------ICU4
          ---------->DOF2<---------ARR11(3)             <---------YAB1
         --------->AtMYB61<------ZmHOX2a(2)           <---------ICU4             <---------ANAC46
       -------->P        <---------ARR14(2)           --------->YAB1      ----------->RAV1(2)
       ------>MYB46(1)   --------->GLK1(2)           <---------YAB1  <---------ICU4
       ------>MYB83      --------->ARR11(3)        --------->YAB1   ------>ZmHOX2a(1)
  --------->ZAT18        --------->ARR14(2)     --------->REM1(1)   <---------YAB1       ------>ZmHOX2a(1)
-->AHL20(2)  <---------ZAT2------>ZmHOX2a(2)  ----------->RAV1(1)  --------->TOE2(3)--------->ARR14(2)
 
acaagtcccctaccaaagctggttcaaggatctggtttgccagcaattgcaacatcatcatcatcatcatcctcattatctgagccgtattcctcttcac  16555600
<- Previous    Next ->

AGI:  At5g41330.1   
Description:  potassium channel tetramerisation domain-containing protein. similar to potassium channel tetramerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G09030.1); similar to hypothetical protein [Nicotiana tabacum] (GB:BAF62469.1); contains InterPro domain Potassium channel, voltage dependent, Kv, tetramerisation; (InterPro:IPR003131); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210)
Range:  from: 16552567    to: 16555131    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g41340.1   
Description:  UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase. Identical to Ubiquitin-conjugating enzyme E2-21 kDa 1 (UBC4) [Arabidopsis Thaliana] (GB:P42748;GB:Q9FN66); similar to UBC5 (UBIQUITIN-CONJUGATING ENZYME 5), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G63800.1); similar to Ubiquitin-conjugating enzyme E2-23 kDa, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47726.2); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme (InterPro:IPR015581); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:
Range:  from: 16555309    to: 16557358    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version