Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------------->AtSPL3             <---------YAB1                                              --------->ARR11(3)           --------->YAB1                                            --------->YAB1       --------->AHL20(2)                                         ---------->DOF2    --------->AHL20(2)                                         ----------->RAV1(1)   --------->AHL20(2)                     <---------ANAC58    --------->ANAC46  <---------YAB1               <-----------TGA1             --------->ANAC58 --------->TOE2(3)      <---------AHL20(2)<---------ANAC46  --------->ANAC46                        < -------->ATHB12    <----------DOF2<---------YAB1           --------->ANAC58                        - ---------ICU4--------------->AtSPL8      <---------ANAC58 <---------ZAT14                          < -------->YAB1<---------------AtSPL8    --------->ARR11(3) <---------ZAT18                         <- --------ATHB12     <---------DAG2 --------->ICU4          --------->ZAT14             ---------->DOF2 ->YAB1<---------AHL20(2)   <-----------GT1            --------------->AtSPL8 <-----------TGA1 ------   aatcattaaaaaattataagtactttttattttcgtcataaatgtcttgtgttttgttctgtacacaacaaagatgatatcgtcatattcaaagaaaaaa  16546300            <---------ARR14(2)      --------->ETT(2)   <---------ANAC46                                                                --------->DAG2  <-------TEIL                                                                    ---------->DOF2 ---------ARR14(2)                                      <---------YAB1--------->TOE2(3) -------->ARR14(2)                                    --------->AHL20(2)    --------->AHL20(2)    --- ---------GLK1(2)                                     <---------AHL20(2)    --------->YAB1   -------- -----ZmHOX2a(1)       <----------DOF2               --------->AHL20(2)  --------->YAB1    <---------ANAC58 ---->DOF2  --------->ARR14(2)                ----------->RAV1(1)  ----------->RAV1(1)     <---------ANAC58   aggattcgtagacagttcttctagtctttcgagttcaagctcaaacaacaacaaaattaatattcaaaacaacattaataaaaaaaaagtatggagtgac  16546400                                             --------->RAP2.6(3)                                            --------->MYB52(1)                                           <---------ARR14(2)                                           --------->ARR14(2)                                      ------>NtERF2                                      --------->LBD16                                     <---------ANAC46                                <---------MYB46(3)                                                <--                                --------->MYB52(2)                                               <---                              <---------MYB52(1)                                       --------->ARR11(3) ------->DOF2             --------------------->WRI1                             --------->TOE1(3)--- --->HVH21          <---------ICU4  <---------LBD16<---------At4g35610           --------->TOE2(3)<--   caaagaaaaaaaaaactctcaaacatttctctgtttgttccggcgaaaacggcaactgtttcatcaaatgacaaacacaaaaaccttaacatctagtttg  16546500                                                                           >>>>>>>>>MYB98                                                                           <---------TOE2(3)                                                       <---------------AGL15                    <----                                                       --------------->AGL15                    -----                                                      <-----------------AGL2                   ------                                                      <-----------------AGL3      --------->ARR11(3)                                                      <-----------------AG<-----------GT1      <-----                                                      <-----------------AGL1      <-----------ARR10  ------>ZmHOX2a(1)              <-----------GT1      =============================================== ---------GT1                 ----------->GT1      <----------DOF2   <---------AHL20(2)        <----- ------CCA1(2)            ---------->DOF2    <---------DAG2         --------->AHL20(2)   <-----------GT1 ------>ARR14(2)       ----------->GT1       <----------DOF2 <---------TOE2(3)    <---------ARR11(3) -------ARR14(2)   --------->AHL20(2)   <-----------GT1<----------DOF2  --------->AHL20(2)  <--------   tatcctctctgatacttcaaaaaaaatgtaaagagttacaagtttccctttttctttcttttttaggctataaatttaacatagtatcttatttctttct  16546600          --------->DAG2    <------ZmHOX2a(1)   <----------ID1 <---------ICU4 -----------AGL15 ---------->AGL15 ----------->AG                     <----------DOF2----------->GT1 ------------AGL2              <----------DOF2    <---------AtMYB61                       --------->LBD16 ============MADS_MADS <-----------GT1          --------->ALFIN1                       --------->MYB52(1) ------------AGL1    <------------------------ANAC81                          ------------>CBF  ----- --DOF2  ---------->DOF2  <----------DOF2     <---------ANAC46 --------->CCA1(2)   *TSS-------->P   aaatcaggacaaaaagtttgatttttttcttttcttttctttttccctgtgtgtggtttcatgggatatagggatgaagaaacaatggctaccggacaaa  16546700                               --------->ANAC46                              <---------AtMYB61                  <---------ARR14(2)                                   --------->ARR11(3)                  --------->ARR14(2)                                   <---------ARR11(3)                  --------->GLK1(2)                                <---------TOE2(3)   --------->MYB46(3)        <---------ALFIN1 <---------------------WRI1  <----------DOF2 ---->MYB52(1)   <---------GLK1(2)   <---------TOE1(2)             <---------TOE1(3)     <---------At4g35610   acagaacaactgtgccagagaatctgaagaaacacctcgcagtttcagttcgaaacattcaatggagttatggtatcttttggtctgtctctgcttctca  16546800                                                                                        ----------->GT1                                                                                    --------->ATHB12                                                        <---------ARR11(3)         <---------AHL20(2)                                                  <---------YAB1                   <---------YAB1                                               --------->GLK1(2)                  <---------AHL20(2)                               --------->ZAT6 <---------ARR11(3)         --------->ARR11(3)                        --------->ATHB12      --------->ARR11(3)  ----------->GT1 --------->AHL20(2)                       <-------TEIL  <---------ARR11(3) --------->AHL20(1) <---------ANAC58    <--------P    --------->YAB1     --------->ARR11(3) --------->ARR11(3) <---------ANAC58   gtctgggtaagtttcttaaatcatattcattgaacactagatattggagattttgaaagatattgatgaagtaaatttcttgattttaattggaaaatta  16546900                                                           <---------GLK1(2)                        --------->YAB1              --------->ANAC58                       <---------ATHB12      --------->REM1(1)             --------->ZAT18               --------->HSFB2a(2)             <---------ZAT18               <---------HSFB2a(2)            <---------ANAC58             <---------ZAT14     <---------ZAT6     --------->ANAC58      <---------ANAC58   gataaaacttatgtgttcacttcaaatcaaaactagtgtttagttctacaactcaagacaaggttctctaggtttttcttgattccattgattttttctt  16547000                          <----------DOF2                      ------>ZmHOX2a(2)                 <---------HSFB2a(2)                    --------->ARR11(3)                  --------->HSFB2a(2)                    <---------ARR11(3)   <---------AHL20(2)                <---------ANAC58        <---------AHL20(2)                <---------ANAC58        --------->AHL20(2)         --------->ATHB12          <---------TOE2(3)             <---------AHL20(1)    <---------ARR11(3)          <---------TOE1(3)   ---------->DOF2<-----------GT1  --------->ARR11(3)                   <-   ataaactcatataaggtttcttgatcttctttaaaagttcaattttttttctcttcttcttgaagttcttgattagttcaagaaaatgttttgtttgttt  16547100                                        ---------->DOF2                                     <---------AHL20(2)                         --------->GLK1(1)                               <---------------AGL15                           <---------ARR11(3)                               --------------->AGL15                    --------->YAB1      =========                              <-----------------AGL3                   <---------YAB1       <------ZmHOX2a(1) ---------DOF2              <-----------GT1                    ----------->GT1 --------->ARR11(3)   tctttattcgatttgatatttgtttttgtttttctatatataaaaagagttttagaatggggagatggatactataatggagatatcaaaacgaggaaga  16547200  Previous    Next  AGI:  At5g41315.1    Description:  GL3 (GLABRA 3); transcription factor. Identical to Transcription factor GLABRA 3 (GL3) [Arabidopsis Thaliana] (GB:Q9FN69); similar to EGL3 (ENHANCER OF GLABRA3), DNA binding [Arabidopsis thaliana] (TAIR:AT1G63650.2); similar to EGL3 (ENHANCER OF GLABRA3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G63650.1); similar to myc-like anthocyanin regulatory protein [Cornus florida] (GB:AAR21669.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 16546683    to: 16550107    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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