Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ANAC46                       <---------ANAC55(1)                       --------->TGA1a                       <---------O2                       <---------ANAC58                       <---------TGA1a                       --------->bZIP60(1)                       ----------->GT1                       <---------bZIP60(2)                       <---------bZIP60(1)                       --------->O2                       <---------ANAC58                       ==============================================bZIP_DOF                       --------->ANAC55(2)                       =========================================bZIP_DOF                  --------->YAB1                 ------>ZmHOX2a(1)      --------------->AGL15                  <---------ICU4                <---------MYB59         =============================                 <---------AHL20(2)          --------->ARR14(2) <----------DOF2                 <---------ATHB51            <---------ARR14(2) <---------DAG2              --------->AHL20(2)            <---------GLK1(1)  <---------ANAC58             <---------AHL20(2)          --------->ANAC58 <----------DOF2  <----------DOF2             --------->AHL20(2)      --------->ANAC46   <------------------------ANAC81      --------->MYB59  <---------ANAC55(2)  --------->GLK1(1)  <---------ANAC58      <---------ARR14(2) --------->AHL20(2) ----------->TGA1 --------->ANAC58<----------DOF2   <-----------------AGL1 ->DOF2<---------ANAC55(2)           --------->ANAC58<---------DAG2  <-----------GT1<---------CCA1(2) --WRI1----------->GT1----------->STF1   --------->ANAC58<------------------------ANAC81   acttaaaataggtaaataaataatgacgtgaaatataacaagcaaggtatcctaacttttcttttgctttttttcttcttttgggcaaatctcatacatg  16314700                                                                                        <---------ZAT14                                                                                        --------->ZAT14                                                              ----------->GT1       --------->ZAT6                                                          <---------TOE2(3)----------->RAV1(1)                                                         --------->YAB1   --------->ANAC46 ----------                                                    <---------------AGL15 --------->ANAC58 --------->ANAC46                                                   --------->YAB1 <---------ICU4 <------ZmHOX2a(2)            <-----------GT1                        --------->TOE2(3)      --------->ANAC58 ----------           <-----------GT1               <---------AHL20(2) <------ZmHOX2a(1)  --------->At4g35610 ------>ZmHOX2a(1)      <---------TOE1(2)--------->AHL20(2) ============================HOX2a_HOX2a ===================================================================MADS_MADS  <---------At4g35610   ttcctgcatattttaaacactcttcgaatgttttatcgaaaaattaaaaacattcttaattaggatgaaaattactacgacagatcacactatacggtac  16314800            <-----------GT1            <---------ICU4                                                          --------->ATHB12           --------->ICU4                                                          --------->AHL20(2)         <---------ICU4                                                            --------->AHL20(1)     ----------->GT1                                                               <---------AHL20(2)  <---------ANAC58                                                             <---------CCA1(1)  <---------ANAC46            --------->ATHB51                                 <---------RVE1(1)  <---------bZIP60(2)         -------->ATHB1                      ---------->DOF2  <---------AHL20(1)  <---------ANAC58            --------->ATHB12              <--------ATHB1    --------->ARR11(3)    < ----->AtSPL3                <---------YAB1                 --------->YAB1    <---------ARR11(3)  <-- ----->AtSPL8            ----------->GT1                   <---------ATHB51  <<<<<<<<<RAP2.2      <--   tataacgtggataattactacatagtattgtattattgagcttgtataagtatttgtgacaataataccaaagagttttagatattttattggtttttct  16314900                         <---------ARR14(2)             >>>>>>>>>GATA-1                           <---------YAB1          ----------->GT1           ----------->GT1    <---------MYB52(1)    --------->WRKY18(1)       <-------TEIL          < ------ZmHOX2a(1)       <---------SPL7             <---------RAP2.6(3)   ---------->DOF2   --------->AtLEC2 -------TOE2(3)      <-----------HVH21             <-----------HVH21  --------->TOE2(3)    --------->ANAC46 -------TOE1(3) <-----------GT1<--------P    ---------->DOF2         --------->REM1(1)   <---------AtLEC2   aaggaaatacagatagataaacctgtcgaaccggttgatttagcacaataagcggtcatgaaacgtcttctacatcaaagttcgtaaatttccatgaaac  16315000                                                        ----------->GT1                                                       --------->DAG2                                                     ---------->DOF2          <---------AHL20(2)                                          --------->ANAC58      --------->TOE1(3)             <------                    ----------->GT1       --------->ANAC46      --------->TOE2(3)          <---------             <------ZmHOX2a(1)   ---------->DOF2 <---------AHL20(2)           --------->AHL20(2)         --------->DEAR3(1)     ------>ZmHOX2a(1)--------->AHL20(2)  --------->ANAC46 <----------DOF2 ----------DOF2    ----------->GT1        --------->ANAC58      <---------MYB59     ---------->ID1<--   gtctttgagcaccgaggaagaaagtttaaaattcctaaagaaacacacaaattaaaaaaggcaaaacctaaaccccatatttatttgtctttttttcttt  16315100                                                                  --------->ARR11(3)                             <---------AHL20(1)                   <-----------ARR10     ---------->DOF2                             <---------AHL20(2)                   <---------ARR11(3)---------->DOF2                          *TSS                                ------>ZmHOX2a(1)  ----------->RAV1(1) ----DOF2      ----------->GT1                         <-----------GT1      <---------ANAC58 --GT1        --------->DAG2 --------->AHL20(1)       <-----------GT1       <---------ANAC58 -------YAB1---------->DOF2 --------->AHL20(2)       <---------YAB1         <---------ANAC46      ---   atcagagaattttaaaaaggtaaaaatagattatattctattccttcagaaaatttttatcgtcctaaaatcttcgtagcctgcaacaaagaaagactaa  16315200                                                                            <---------DEAR3(1)                                                                           <---------ABI4(1)                                                                          <---------RAP2.3(1)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                     <---------MYB52(1)                                                                  <------NtERF2                                                                <---------DEAR3(1)                                                                --------->RAP2.3(3)                                                                --------->DEAR3(1)                                                                --------->RAP2.3(2)                                                                --------->ANAC46                                                               --------->ERF1  <---------ANAC46                                                               --------->ORA47(2)                                                               --------->RAP2.3(1)                    <---------ANAC46                           --------->ATERF1(1)                 <---------ANAC58                              --------->DEAR4(2)           --------->AHL20(1)                                 <---------ATERF1(1)           <---------AHL20(1)          <----------DOF2       --------->DEAR3(1)----------->GT1           --------->ARR11(3)  <----------DOF2           --------->MYB46(3)<---------------------WRI1         <---------AHL20(1)    <---------DAG2  <---------AHL20(2)------>NtERF2<------NtERF2         <         --------->AHL20(1) <---------AHL20(2) --------->AHL20(2)--------->ABI4(1)               ----         <---------AHL20(2) <-----------GT1   --------->AHL20(2)--------->RRTF1(3)           <------- ------->DOF2    <---------ANAC58  <-----------GT1     --------->ANAC46  <---------DEAR3(1)  --------   gaaagaactaaaatattttgcttcgtctaattacttttttcctttggatttaattctcagccatcgccgccgttttcggcggtgtaaaaaatgaagaacc  16315300          <---------AtMYB61          --------->ALFIN1       <---------DEAR3(1)      <---------LBD16                  <---------AtLEC2   ---------->DOF2          <---------O2  <---------ARR14(2)        --------->O2              <-----------GT1  --------->ARR14(2)     --------->ETT(2)        <---------GLK1(2) <------ZmHOX2a(1)       <---------ETT(2)        <---------ARR11(3) --------------OsCBT   --------->REM1(2)         --------->ARR11(3) ----->TOE1(2)        --------->ALFIN1 <---------ANAC46        ---------->ID1 --ARR14(2)--------->MYB55(2)    <---------MYB52(1)  <-----------GT1                <---------TOE1(2) ->ARR14(2)<---------MYB46(3)   <-------GAMYB  ----------->ARR10   <----------DOF2 ------>ZmHOX2a(1)<   gtaggaaacgcggtggtttaagcagtgtcgacgtcgttgtttcatggagaagatttttccgatttgtttctttgttcgtcttctccttcgttctcttctc  16315400                                                                 --------->ANAC55(2)                                                               <-----------GT1                                                              <---------YAB1                                                            <---------ICU4                                                            --------->YAB1                                                           <---------YAB1                                                         <---------AHL20(2)                                                        --------->AHL20(2)                                                        <---------AHL20(2)     <---------TOE2(3)                                                     --------->AHL20(2)      <---------AHL20(2)                                                     <---------AHL20(2)      --------->AHL20(2)                                                <---------AHL20(2)          --------->AHL20(2)                           ----------->RAV1(1) --------->AHL20(2)<---------ANAC55(2)           ------                --------->ANAC55(2)  --------->YAB1 <---------AHL20(1)    <---------ICU4       ------               <---------TOE2(3)  --------->WOX13(1)--------->AHL20(2)   --------->ICU4        ------               <---------TOE1(2) <---------AHL20(2) --------->AHL20(1) --------->YAB1          ------ ----------DOF2<---------TOE2(2) --------->AHL20(2) <---------AHL20(2)--------->ZAT6      --------->WOX13(1)   tgctttcttcatcttcttaggtattaatccaacaattaatcacaaccgttttaatttatttattattacttaatactaattaatatttgtataaatcagg  16315500                           <---------WRKY38(1)                          --------->WRKY18(1)                         <--------ZAP1                        --------->DAG2                         <-----------HVH21         ------->TEIL                <---------RAP2.6(2)<-----------ARR10          <---------TOE2(3)                     -               <---------ZAT18     --------->ARR11(3)     <-------GAMYB                             <              <---------ANAC46     --------->ARR14(2)    --------->MYB55(2)                         -             <---------SPL7<---------WRKY12  --------->ARR14(2)                                  ----            <---------MYB46(3)     <---------ARR11(3)    <---------MYB46(3)                     ----- ----->GT1<---------MYB52(1)       <---------ARR14(2)  <---------MYB52(1)            --------->At4g35610 --->ANAC58<---------DEAR3(1)  ------->GAMYB <---------ARR14(2)           <------ZmHOX2a(2)     <---- --->ANAC58--------->ALFIN1<---------WRKY45<---------MYB46(3) <---------TOE1(3)---------->DOF2 <----- --->AtLEC2<---------AtMYB61  --------->ANAC46   <---------ZAT14         --------->ARR14(2)    ------   caaaattcgaccggtggtgcggtcttcggtcaacgcagttcttcgtggttctgtaccggtggttaaggtgatcacgatccatgaagcagttgagtttccc  16315600  Previous    Next  AGI:  At5g40720.1    Description:  similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G27330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14626.1); contains InterPro domain Protein of unknown function DUF23 (InterPro:IPR008166) Range:  from: 16315126    to: 16317229    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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