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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                       <---------YAB1
         --------->ANAC58
         --------->ANAC58
       ------>NtERF2<---------ARR14(2)                                            <------NtERF2
       <------NtERF2<---------MYB52(1)                                            <---------At4g35610
  --------->DAG2    --------->ARR14(2)                                       --------->DAG2
-----MYB46(3)     --------->LBD16                                           ---------->DOF2        -
------>GT1       --------->LBD16                       <-------TEIL<---------AtLEC2           <-----
----TOE1(2)     <---------LBD16                     <------ZmHOX2a(1)   <----------ID1        <-----
----TOE2(2)    ------->GAMYB                  ---------->DOF2<---------YAB1---------->DOF2    ------
 
gttataaggcggacacaaccccggttatgttcgatatagatgaagaagagaaagaggatgcattgtgtttgcatagcgaaaaggcagcgattgcatttgg  16188200
                                         --------->HSFC1(2)
                                         --------->HSFB2a(1)
                                         <---------HSFC1(2)
                                ------>ZmHOX2a(2)                                         <---------ARR11(3)
                               <------ZmHOX2a(2)                                          --------->ARR11(3)
                              <---------ARR14(2)                                   ------>ZmHOX2a(2)
                              --------->ARR14(2)                                  --------->GLK1(1)
                        --------->ARR14(2)                                       <---------ARR11(3)
-------->YAB1           <---------GLK1(2)<---------HSFB2a(1)                     --------->ARR11(3)
-MYB46(1)       <---------ARR11(3)      ------->TEIL                           <---------YAB1
-MYB83          --------->ARR11(3)     <---------ARR14(2)                    --------->YAB1<--------
----->GT1---------->DOF2<---------ARR14(2)        <---------AtMYB61         <---------YAB1<---------GLK1(2)
 
tataatgagtttgaaagaagatgttccgattcggatcgtgaagaaccttcgggtttgtggagattgtcatcaggtttctatgatgatctccaagattttt  16188300
       --------->ATHB12
      <---------YAB1                                                                         <------
      <------ZmHOX2a(2)                                                        --------->GLK1(2)
     <---------ARR11(3)                                             <----------DOF2        <--------
     --------->ARR11(3)      --------->ARR14(2)                    <---------ANAC58------>MYB46(1)
-RVE1(1)   <-----------HVH21 <---------ARR14(2)                    <---------ANAC58------>MYB83
 
aacagagagatcattgtcagagacagaaacaggttccaccatttcaaagatggtcactgttcttgtaatggcttttggtgagaacctagctatgtaacca  16188400
                                                        --------->ANAC58
                                                        --------->ANAC58
                                                    --------->YAB1
                                                 --------->YAB1                                    <
                                                 <---------ICU4              <---------AHL20(2)   <-
                                                <---------YAB1              <---------YAB1        --
 <---------AHL20(2)      <---------TOE2(3)      --------->ICU4           --------->ICU4           <-
 --------->AHL20(2)     <-----------GT1      --------->ICU4    <---------AHL20(2)                ---
------MYB.PH3(1)   --------->ATHB12 ----------->GT1<---------YAB1   ----------->GT1         --------
---GT1 <-----------GT1 ----------->HVH21     <---------YAB1   --------->AHL20(2)            --------
 
ttttttaatttcacctagttagtgatttgacgatttcagaggtaaaacatgattatgataagaaatttaaaatgtgatatttattgtttatccaatagta  16188500
                                   ================================MADS_MADS
                                   <---------------AGL15
                                 ----------->GT1
                          <---------ANAC58
                          ----------->GT1
                          <---------ANAC58                                                        --
                          <---------ANAC46           <------------CBF                            ---
                      <---------WOX13(1)           --------------->AGL15                      ------
---------AHL20(2)    <------------CBF              <---------------AGL15                    <-------
--------AHL20(1)    --------->ATHB12            <-----------GT1             <<<<<<<<<<MYB80 --------
------->AHL20(2)   --------->AHL20(2)        <---------ICU4                <------MYB46(1) ---------
--------AHL20(2)   <---------AHL20(2)     --------->YAB1                   <------MYB83   ----------
------>ICU4        <---------AHL20(1)     ----------->GT1                 --------->MYB59<----------
--->GT1            --------->AHL20(1) --------->ICU4--------->ATHB12  <---------TOE2(3) ---------->DOF2
->YAB1       ----------->GT1     --------->YAB1--------->ICU4    <----------DOF2   <------ZmHOX2a(1)
 
attttttttttgaagccagtaattaattggcgttaatagtaaaaatggtaattactaattggagaaggcttttaagtttggtttgaggagagaaagataa  16188600
 *TSS
---------->CBF
------>YAB1
--->YAB1                                                     <------NtERF2
--ARR11(3)      --------->ANAC58                 --------->AHL20(2)         --------->GLK1(2)
->ARR11(3)    ---------->DOF2                  <---------RVE1(1)           --------->WOX13(1)
>YAB1       <---------YAB1                    --------->ARR11(3)--------->ARR11(3)
->GT1  <---------At4g35610                    <---------GLK1(2) <---------ARR11(3)
-----------WRI1 --------->ANAC58     ---------->DOF2       <---------DEAR3(1)
 
taacaatgagagatgatcaaagcaaatgtgtattcatgttcaaagttcagatttttatatcgtcggagatttttgagccaatctagttttgttcatagtt  16188700
                                                                         ---------->DOF2          <-
                              --------->ZAT14               <---------MYB52(1)                 <----
                              ---------->DOF2             <---------ANAC58                     <----
                           <----------DOF2                <---------ANAC58       <---------ZAT14  --
                         --------->At4g35610              <---------ANAC46--------->DAG2      <-----
                         <---------At4g35610     --------->ZAT14   --------->ATHB12    --------->ALFIN1
 <-------TEIL         <---------At4g35610        <---------ZAT14 <----------DOF2 --------->ZAT14 ---
 
tagatgcaaatgtttcatcacttatagctgctgtaaagtcttgtgtctccattgaactgtgtcgtttgcttcattgtaaagtagtgaagagtgtgagtta  16188800
                                   --------->ANAC55(2)
                                   <---------ANAC58
                               <-------GAMYB
                            <---------ANAC58
                            <---------ANAC46
                            <---------ANAC58
                            <-------GAMYB
                           --------->MYB52(2)
                           <---------MYB46(3)
                           <------MYB83
        --------->ATHB12   --------->MYB55(2)
        <---------AHL20(2) <------MYB46(1)
--------RAP2.6(3)         <---------AtMYB61
-----At5g28300           <--------P<---------ANAC58         --------->ZAT14
-----DOF5.7(2)        <----------DOF2                       <---------ZAT14
---->NtERF2         <---------ZAT2 <---------ANAC46  <---------YAB1
------GT1           --------->ZAT2 <---------ANAC55(2)      --------->ZAT18
------>ANAC46  <---------PCF5 <---------MYB46(3)  --------->ICU4   --------->GLK1(2)
 
ccgccatggatttattggggaccagcttgttggttgttacttgagattgggtcatgatgtttgtgcagagaagctgttcgatgaaatgcctgagagagat  16188900
                                                                                        <---------TGA1a
                                                                                        <---------ANAC46
                                                                                        <---------O2
                                                                                        --------->ZAT2
                                                                                        <---------ZAT2
                                                                                  --------->ARR11(3)
                     <---------LBD16                                              <---------ARR11(3)
                   --------->ARR11(3)                                            <---------GLK1(1)
                   <---------ARR11(3)                                            --------->GLK1(1)
                   --------->ARR14(2)                                       --------->YAB1  <------MYB83
                  --------->RVE1(1)       --------->MYB52(2)             <------ZmHOX2a(1)--------->ALFIN1
             <----------DOF2   <---------LBD16                           --------->YAB1 <---------bZIP60(2)
         <---------GLK1(1)    <---------LBD16 <---------LBD16  --------->ALFIN1 <---------ARR11(3)
   <---------ANAC46<---------ARR14(2) ----------->GT1       <---------TOE2(3) <---------YAB1<------MYB46(1)
 
ttagtctcttggaactctttaatatctgggtattcagggagaggttatttggggaaatgttttgaggtgttgtctaggatgatgatatctgaggtgggtt  16189000
                                                                                                 <--
                                                                                                 <--
                                                                                    <------MYB46(1)
                                                                                    <------MYB83 <--
              --------->ANAC55(2)                                                  <---------MYB46(3)
              <---------ANAC46              <---------LBD16                        --------->MYB111(1)
              <---------ANAC55(1)      <---------ANAC46                            --------->ALFIN1
              <---------ANAC58     <---------ANAC58                                <---------DEAR3(1)
              <---------ANAC58     <---------ANAC46                                <---------AtMYB61
              <---------ANAC55(2)  <---------ANAC58       <------ZmHOX2a(1)        --------->MYB111(2)
            <-----------GT1   ===================================HOX2a_HOX2a       --------->MYB46(2)
      <---------ATHB12        ------>ZmHOX2a(2)         <---------TOE2(3)          --------->MYB55(2)
    ------>MYB83            --------->ARR11(3)--------->LBD16                     <--------P  >>>>>>
    ------>MYB46(1)         <-----------ARR10<---------ANAC46               --------->ATHB12  >>>>>>
  <---------MYB59           <---------ARR11(3)<---------LBD16    <------ZmHOX2a(1)<---------MYB55(1)
 
ttagacctaatgaagttacgtttttgtcgatgatctcggcttgtgtttacgggggaagtaaggaagaaggacgttgtattcatgggttggtgatgaaatt  16189100
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AGI:  At5g40405.1   
Description:  binding. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G66520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41028.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 16186543    to: 16188381    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At5g40410.1   
Description:  binding. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT1G08070.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69113.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61988.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 16188602    to: 16190454    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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