Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <<<<<<<<<TBF1  <<<<<<<<<TBF1                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                  <<<<<<<<<TBF1  <<<<<<<<<TBF1                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <<<<<<<<<TBF1XXXXXXXXXXXXXXXXXXXX>MIR838             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <<<<<<<<<TBF1  <<<<<<<<<TBF1  XXXXXXXXXXXXXXXXXXXX>MIR396B          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                            --------->YAB1      ------>ZmHOX2a(1) <<<<<<<<<TBF1    <---------ALFIN1       --------->ANAC58     --------->ZAT6 -----------------------ANAC81<<<<<<<<<TBF1 <---------ARR11(3)  --------->ANAC58--------->YAB1   <---   tcttcttcctcttcttcttcttcttcttcttcttcttcttcttccacatcttccttcaatttgagcaaggaagaaactccattcataacacaatcttcaa  16151700                                                                                  --------->TOE1(3)                                                                                  --------->TOE2(3)                                                                               --------->GLK1(1)                                                                               <---------GLK1(1)        <-------TEIL                                                   <---------MYB52(1)      <---------ARR14(2)                                   <---------DAG2     --------->ARR14(2)      --------->ARR14(2)                         ----------->RAV1(1)  <-------GAMYB      <---------GLK1(2)      <-----------GT1 --------->MYB46(3)    <---------At5g28300 <---------ALFIN1 ------ATHB12   <---------GLK1(2)       --------->TOE2(3)  <----------DOF2 --------->ETT(1) <--------   taactccagattcgttcaaattcttctcatttttctcgtcaacatcaacaacaacatcagactttttctcaccgttgtcggaaaccctaacaccgttctc  16151800                                                                     <-----------ARR10                                                                     <---------ARR11(1)                                                                     --------->ARR14(2)                               ----------->RAV1(2)                   ------->TEIL                               <---------ZAT2 --------->ZAT14       <---------CCA1(2)                               --------->ZAT2 <---------ZAT14      --------->LBD16                               --------->At4g35610                --------->ANAC58                    <---------TOE1(3)         --------->At4g35610 --------->ANAC58                    <---------TOE2(3)         <---------At4g35610<---------LBD16             --------               <----------DOF2 <---------At4g35610             --------->PCF2  <---------GLK1(2) -MYB52(1) --------->YAB1    <-----------RAV1(2)            --------->MYB59    --------->ARR14(2)   ttgaacaacaccatcatcttttagggttttctcagctgattcaatctctgcagaacaaggcttaggtcccgcatcttctccgattcccaaaacaacttca  16151900                                                                                                  ---                                                                                                  ---                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                        ------>MYB83        ------>MYB46(1)                                                                        ------>MYB46(1)     ------>MYB83                     ----------->GT1                                    --------->MYB52(1)  ---------                   <---------ZAT14                                    <---------MYB59    --------->ANAC58               ------>NtERF2                          ----------->GT1 <---------MYB111(1)--------->ANAC58             <---------HSFB2a(2)         <----------ID1               <---------MYB46(2) --------->ANAC46       <-----------GT1       --------->AHL20(2)      --------->YAB1 ------->TEIL   --------->ANAC46 ->TOE2(3)   --------->HSFB2a(2)       --------->MYB52(1)    --------->AHL20(2)<-----------GT1    <--   atttccatttttcttcccgactgtagaaaaaaaaaatcacaaaacgacaaacaaatcagaaaaaaaaatcaacctaactatttacacacaaacccaacaa  16152000                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                             --------->AHL20(1)         <----------ID1                --------->ANAC58                      <---------AHL20(2) ------>ARR11(3)           <------MYB83--------->ANAC58            ----------->GT1  <---------MYB59 ------>ARR14(2)           <------MYB46(1)                        --------->DAG2   --------->ANAC55(2) -->RAV1(1)               --------->MYB59               ----------->GT1      --------->AHL20(2) -------ARR11(3)          <---------TOE2(3)    --------->TOE1(2) ---------->DOF2 <-----------GT1   --   tatctcccaaaaaaacaaattttgaaattaggttaactcttacgaaaaacctagaaaaacgaaaatataaagtaacaaattttttacctgattttgagct  16152100                                        <---------ARR14(2)                                        <---------ARR11(3)       --------->ANAC58                 --------->ARR14(2)       --------->ANAC58       --------->DEAR3(1) ---At4g35610                 --------->MYB46(3) -->ZAT2                     --------->At4g35610 ---ZAT2              --------->HSFB2a(2)   *TSS                                          --------->GLK1(2) ---GLK1(1)        <---------DAG2       --------->GLK1(2)                  ---------->DOF2<---------- -->At4g35610      <----------DOF2      --------->ARR11(3)             <----------ID1    <---------GLK1(2) ------->LBD16 --------->MYB46(3)      <---------GLK1(2)     <----------DOF2          --------->YAB1   ccgagagaaacgaaacaacaacttttcgaacagcgaccgaagaatcttcaagaaaaaacacttctttgtaagaagaacaaagacactctcagaatctcat  16152200                                                                  <-----------GT1                                                           <------NtERF2                                                          ------>NtERF2                                                         --------->RAP2.3(2)                                                         <---------ANAC46                                                        <------NtERF2                                                        --------->RRTF1(1)                          <                                                        --------->RAP2.3(1)                         -                  <-----------GT1                       ------>NtERF2<---------------AGL15     ------            <----------DOF2                            <---------DEAR4(2)                      <-----    <---------ARR14(2)                                 <---------ATERF1(1)                     ------    --------->ARR11(3)                                 <---------ORA47(2)            <---------TOE1(3)    --------->ARR14(2)           --------->ATHB12     <---------DEAR3(1) <---------ANAC46      <-----    <---------ARR11(3)  <---------LBD16               --------->ANAC46<----------DOF2<---------TOE2(3) -ARR10 ------>ZmHOX2a(1)       <---------YAB1       <---------LBD16----------------->AGL1  <--------   gagaaaaatcctctcttttttttctctctggattttgatttgagagaagatgaaacgcggcgcaaaaatttcctttcggagaaatttaagggtactttcg  16152300 --------->AHL20(2) <---------AHL20(2)                                                            ---------->DOF2 ---------YAB1                   <----------DOF2                      <---------AHL20(2) -------->ICU4                   <---------DAG2                      --------->AHL20(1)           --- --->YAB1               --------->ANAC55(2)                          --------->AHL20(2)    ---------- ----ANAC58             <---------ANAC58        <------ZmHOX2a(1)    <---------AHL20(1)  --------->ALFIN1 --->ANAC55(2)          <---------ANAC58      --------->LBD16        <---------AHL20(2)<---------ANAC58 ----ANAC58         <---------ANAC58         <---------LBD16     --------->AHL20(2)    <---------ANAC58 --DOF2             <---------ANAC58         <-----------RAV1(2) <---------AHL20(2)  --------->At4g35610   taattaatgagtttttttttttgcttacttatctgcttttttttgccccaggaataagacaacgtttttaatttatttccctaaatcagccgtgtcgcta  16152400                                                                                        --------->GLK1(1)                                                                                        <---------GLK1(1)                                                                                       <---------ARR14(2)                                                                                      <------NtERF2                                                                                     --------->LBD16                                                                                    <---------ANAC46                                                                                   <------NtERF2                                                                                   <---------LBD16                                                                                 --------->ALFIN1                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                               <---------ANAC55(2)                                                                               <---------O2                                                                               --------->O2                                                                               --------->TGA1a                                               <---------ANAC46                <---------TGA1a                                          --------->ANAC58                     --------->ANAC55(2)                        ----------->GT1   --------->ANAC46                     <---------ANAC55(1)                        <---------ZAT6    --------->ANAC58                     <---------bZIP60(2) ------>YAB1  <---------STY1(2)    --------->At4g35610                   --------->GLK1(2) >ID1         --------->STY1(2)    <---------At4g35610--------->YAB1    <---------GLK1(2)   tcacaataaactgactagctacgagagtgtaaaatacagcttactcgctatgtgtataagaacatcagtgtctagattcttacgtggcggaaatcggata  16152500                                                           <---------ANAC58                      ------->TEIL                         <---------ANAC58                <---------ARR14(2)                      <-------MYC3            ------->MYC3                                ------->MYC3            <-------MYC2                            ----------->HVH21            <-------MYC4                           <-----------HVH21         ----------->GT1            <-------MYC3                          --------->bZIP60(2)      <---------ZAT2            ------->MYC4                          --------->TGA1a          <---------At4g35610            ------->MYC2                          =====================bZIP_DOF           --------->TGA1a   --------->ALFIN1     --------->O2             --------->ZAT2           --------->ANAC55(2)                    --------->ANAC58    ----------->HVH21      --------           <---------TGA1a --------->ALFIN1       --------->ANAC58   <---------WOX13(1)     <--------           <---------ANAC55(2)                    --------->ANAC46 --------->ATHB12        --------->RAP2.6(3)           --------->O2--------->ANAC58         <---------O2<----------DOF2--------->At4g35610           <---------O2--------->ANAC58       --------->CCA1(2)   <---------YAB1    <---------YAB1   gagagtagataacacgtgtatatgaacgcgagtgggatgaaataagagagacgcgtcacatgctttcgatgattgacagctgtaatatgcttagacggct  16152600  Previous    Next  AGI:  At5g40340.1    Description:  PWWP domain-containing protein. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G27860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14756.1); contains InterPro domain PWWP (InterPro:IPR000313) Range:  from: 16148882    to: 16152144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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