Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             <---------TOE2(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            ---------->DOF2            xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------AHL20(2)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->AHL20(2)      xxxxxxxxxxxxxxxx>smallRNA(s)     --------->TOE2(3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------AHL20(2)   --------->GLK1(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------AHL20(2)   --------->ARR11(3)        <----------DOF2            --------->YAB1--------->AHL20(2)   <---------ARR11(3)      <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------AHL20(1)  --------->RVE1(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->AHL20(2) ---->AHL20(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->AHL20(2)               <---------GLK1(1)   taaaaaatctaaattaaagaagagttgaactctttgtctcgagggcttcgatttgatataatacttctcaatttttttaaaacttgacgaaatctgacaa  15974200                                <----------DOF2                 <---------ANAC58                 <---------ANAC55(2)                 <---------ANAC46                 --------->ANAC55(2)                      ---------->DOF2                 <---------ANAC58 ----------->GT1       --------------->AGL15                     <--               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)     <---------------AGL15                 -------           <---------AHL20(2)<-----------GT1            --------->HSFB2a(2)                  --------       ----------->GT1     <-----------GT1              <---------HSFB2a(2)              <-----------GT1   tagcaaaaaatgttatattgcgtagtatttttcactttgtaaaattattctatattttctgaaagtagaaatggacgatttcaagacttattttccacaa  15974300                                                                    <---------WOX13(1)                                                                  --------->ATHB12               --------->GLK1(2)                                 --------->ICU4               ------->TEIL                                      <---------YAB1               --------->ARR14(2)                            -------->P               <---------ARR14(2)                           --------->MYB52(1)                   ----               <---------ARR11(1)                         <---------MYB111(1)                    ----            <---------ANAC55(2)                           <---------MYB52(2)                    -----      --------->DAG2                                      <---------MYB46(2)                    -----     ---------->DOF2                                      --------->MYB46(3)                    -----  ------>ZmHOX2a(1)                                     --------->MYB52(1)           <---------AHL20(2) --------->TOE2(3)                            --------->ANAC46 --------->YAB1        --------->AHL20(2) -------ARR11(3)                       <-----------GT1<------------MYB.PH3(2)        --------->ICU4 -->ANAC46  --------->ANAC55(2)  --------->ATHB12     <---------MYB52(2)             <---------ATHB51 ->LBD16  <-----------GT1     <---------CCA1(2)       <---------MYB59         ----------->GT1  <-----   aatcctaaaaagttacgaatcttgaaacttgtgtatcatttgaactatacacaataactaactaaccatgattgaaaacgttgtgaaataattcaatccc  15974400                    <------MYB83                    <------MYB46(1)                            --------->ARR14(2)                  <---------WOX13(1)                           --------->GLK1(2)                -------->HAHB4                                 <---------ARR14(2)        <---------ANAC46                                      <---------GLK1(1)     --------->TOE2(3)                                  <---------ANAC58       <---------ICU4 ----->LBD16    <---------ICU4                          <---------ANAC46      --------->ICU4 -->NtERF2      <--------ATHB1                          <---------ANAC58--------->YAB1 ---->ANAC58    --------->ATHB12                     --------->ANAC46--------->YAB1              ==== ---->ANAC46   --------->ICU4                      <-----------GT1----------->GT1             <------ ---->ANAC58   <---------YAB1                 ------->TEIL    --------->GLK1(1)--------->ATHB12  <--- ----LBD16   --------->YAB1           <---------YAB1 <---------RAP2.6(2)--------->AHL20(2)  <--------   gccattaccttcgtataatgattggtaatagtctcgactgatgatatgtatatatacggcttggaaatctgtaataaaaaatgatttcgaagttttgtgg  15974500                                      --------->ATHB12                                      <---------ICU4                                     <---------YAB1                                     --------->ICU4                                   --------->TGA2(1)                                   --------->bZIP60(1)                                   <---------bZIP60(1)                                ----------->HVH21                               <-----------HVH21                               --------->LBD16                              <---------ANAC55(2)                              --------->ANAC46                              --------->O2                              --------->TGA1a                    <-----------HVH21                              <---------TGA1a                   --------->ANAC46                              <---------O2                <---------At4g35610 =======================================bZIP_DOF          --------->At4g35610 ---TOE2(3)                   --------->ANAC55(2)     <-----------RAV1(1)                           - -------DOF2        ====================bZIP_DOF   --------->ATHB12                                 < -ANAC46            <----------DOF2<---------TGA2(1)<------------CBF                     <-----------   tttaagggcattcaatctatcgctttcttctcccgtgacatcattgtcgaggtttattgctgctctccgtcgctctctctctcttgtggtccattggcct  15974600                                 <---------YAB1                          <---------ARR11(3)                 <---------GLK1(2) -------->AHL20(2)   ------------>CBF ---------AHL20(2)  --------->TOE2(3)   <---------ANAC46        <----------DOF2 -CBF         <-----------GT1<----------DOF2 *TSS               <---------DAG2        <-----------GT1   atttaaatctctcttatcacattctcaatttctttatatttgaagtgtattcaaaaccccaaaacacttttctcattctcttctctattttcttcttgct  15974700                                                 <---------AHL20(2)   ------>MYB83                                                --------->AHL20(2)    ------>MYB46(1)                                 --------->At4g35610     ---------->DOF2    ----------->RAV1(1)    --                                 <---------At4g35610 --------->YAB1 <---------MYB111(2)       ------>ZmHOX2a(2)                      <---------DEAR3(2)   --------->TOE1(3)        <---------MYB111(1)      <------ZmHOX2a(2)         <----------DOF2    <----------DOF2--------->TOE2(3)     --------->REM1(1)          <--------      <-----------GT1<---------MYB46(3) <-----------GT1<---------YAB1 -------->P            ---------   ctctagtttttctttcttcttggtcgtttcctttcagcataaaaaccttataaaatcataaaagcttacacctacttgccacatagacatagccgatctc  15974800  <---------ARR11(3)  --------->ARR11(3) <---------CCA1(2)                                    ---------->DOF2 <---------ARR14(2) ------->AHL20(2)                         <---------ZAT6              --------->ARR14(2)       <----- -ARR14(2)                           <---------At4g35610  ---------->DOF2--------->ANAC46      <----- >ARR14(2)                --------->ARR11(3)       ----------->GT1    --------->GLK1(2)    <---------   attatatctctatttctatttctcaatagaacttgtttgagctagtgtgagagaagtaaagaaagagagaagaatccacaacttagttagggtcttttct  15974900                                                                        -------->HAHB4                                                                        --------->ATHB12  <---------At4g35610                                                                       <---------YAB1     <---------ZAT2                                                                       <---------ATHB12   --------->ZAT2                                                                --------->YAB1      <---------ARR14(2)                                                         ------>ZmHOX2a(2)          <-----------ARR10                                                        <------ZmHOX2a(2)           --------->ARR14(2)                                                        --------->GLK1(1)           ------->TEIL                                                        <---------GLK1(1)           <---------ARR11(1)                                                       --------->ARR14(3)          <---------CCA1(2)                                                       <---------ARR11(3)          <---------ARR14(1)                                                       <---------ARR14(2)        --------->TOE2(1)                                      --------->YAB1   --------->ARR14(2)   <---------WRKY18(1)------ ----ANAC58                 <------ZmHOX2a(2)          --------->ARR11(3) <---------WOX13(1)   <----- ----ANAC58                --------->ARR11(3)       <---------TOE1(2)  --------->ICU4     --------->At4g35610 -DOF2                     <---------ARR11(3) --------->ZAT18 <---------MYB52(1) --------->TOE1(1)   tgccacattgttgaacatgtcgaacagaagatcaaggcaatcttcaagtgctccaaggatctccgataatcaaatgattgacctcgtatctaagctccgt  15975000                   <---------DOF5.7(2)                  <---------WRKY12                  <---------WRKY45                                          ------->GAMYB                  <---------WRKY38(1)                                      --------->MYB46(3)                 --------->WRKY18(1)         --------->ANAC58         --------->YAB1         <------NtERF2  <---------O2  ----------->GT1        <---------ARR11(3)        --------->LBD16 <---------bZIP60(1)  <---------ANAC55(2) <-------TEIL       --------->ETT(1) --------->bZIP60(1)  --------->ANAC58--------->ARR11(3)       <---------ANAC46 --------->O2 <---------TOE1(3)       --------->ARR14(2)        --------->TOE2(3)      <---------LBD16 ------->GAMYB  --------->DAG2         <---------CCA1(2)        <---------TOE2(3) --->LBD16     <------MYB83          <---------TOE2(3)--------->CCA1(2)  <-----------GT1        <---- ------HVH21   <------MYB46(1)  <---------YAB1 --------->YAB1<---------ARR14(2)     <-----------GT1   caaattttgccggagattggtcaacgacgtcgttctgataaggtatcacgcataatatatgcatatattcatttataacgaccatttaacattatccatc  15975100  Previous    Next  AGI:  At5g39860.1    Description:  PRE1 (PACLOBUTRAZOL RESISTANCE1); DNA binding / transcription factor. similar to transcription regulator [Arabidopsis thaliana] (TAIR:AT3G28857.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14946.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092) Range:  from: 15974645    to: 15975683    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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