Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ANAC58                                                                                --------->ANAC58                                                                             --------->STY1(2)                                                                             <---------STY1(2)                                                                             <---------ZAT2                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                        <------ZmHOX2a(2)                                                           --------->AHL20(2)--------->ZAT2                                                       --------->ANAC58 --------->CCA1(2)                                                       ----------->GT1  =============================                    --------->YAB1                     --------->ANAC58--------->AGP1                    <---------ICU4                   --------->CCA1(2) <---------ARR14(2)         <--                   <---------ATHB12                 <----------ID1     --------->ARR14(2)  ------->GAMYB                   --------->ICU4              --------->TOE1(2)      --------->At4g35610 --------->ANAC46                 --------->WOX13(1)            --------->TOE2(2)<---------AHL20(2)        --------->ANAC58           --------->AtMYB61 ----------->GT1  --------->ANAC58  --------->AHL20(2)        --------->ANAC58      --------->SPL7<------------ATHB5        --------->ANAC58 --------->AHL20(2)       --------->MYB52(1)    --------->TOE1(2)      --------->At4g35610<---------ANAC55(2)--------->WOX13(1)   <---------ATHB12   aaaacacatacgaccaaaacaatcatggaagatgaaaaatcaaacaaaacgtaagagacgaaaaaataaatcagatccaagctagcaaatcaacgaaaca  15023000                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                    <------ZmHOX2a(2)      ---------->DOF2         --------->ANAC58               --------->ANAC58                  <---------WRKY45         --------->ANAC58               --------->ANAC58       <-----------ARR10<------ZmHOX2a(2)     --------->ANAC46        --------->YAB1        <---------ARR11(3)     <---------WRKY12     --------->ANAC58       <---------ATHB12       --------->ARR11(3)     <---------WRKY38(1)   -----     --------->ANAC58     --------->WOX13(1) <---------------------WRI1  --------->WRKY18(1)    ----- ====HOX2a_HOX2a<---------AHL20(2)     --------->DAG2    --------->DAG2 <--------ZAP1           <---- ----ZmHOX2a(1)--------->AHL20(2)     ---------->DOF2   ---------->DOF2 <-----------HVH21  <------ZmHOX2a(2)   ggacaacaagcaagctattaaatcgattcaatcatatacaaaaagccatcgaagatcaaaaagcgaaactactcggtcaaagatcaaaaacagatcaaac  15023100                     ---------->DOF2                 --------->GLK1(2)                 <---------ARR14(2)                 ------->TEIL                 <-----------ARR10                                      <-------TEIL           --------->TOE2(2)                                    <------ZmHOX2a(1)    <---------ATHB12  ----------->GT1--------->ARR14(2)                       <---------LBD16<-----------GT1 ---->ANAC58     <---------ARR11(1)                    <---------ZAT2  --------->CCA1(2) ---->ANAC58    <---------ARR14(1)                     --------->ZAT2 --------->ARR14(2) ------ID1 --------->TOE1(2)                        ---------->DOF2   <---------ARR14(2)   gacaaggtcaatacctccgaatctaaagagattagcgactaataaacacatattcaaagctcgggaggacgagatacaccgttctaaatcatcgatagaa  15023200                                    ------->GAMYB                      --------->CCA1(2)                      <------ZmHOX2a(2)                     --------->AGP1--------->MYB46(3)                     <---------ARR14(2)      <---------ANAC58                     --------->ARR11(3)      <---------ANAC58                                    <---                     <---------ARR11(3)      <---------ANAC46                 <----------DOF2    ----                    --------->GLK1(1)        ----------->GT1            <xxxxxxxxxxxxxxxxsmallRNA(i)              --------->MYB52(1) <-----------GT1 ---------->DOF2    ------->GAMYB             -------      ----------->GT1--------->ARR14(2) ---------->DOF2            --------->MYB46(3)    ----------->GT1   gacgaaaatggaaaaaaaaccgagatccagtaatgtaaccatcaaaggcgtaaaagaagaggtaatctaaccatcgccatctttgtcgaagaggctaaaa  15023300                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               <---------ARR14(2)      --------->LBD16               <---------ARR11(3)      ------>NtERF2               --------->ARR14(2)     --------->ANAC46               <---------AGP1         --------->ANAC58               --------->AGP1        ------>ZmHOX2a(2)              --------->GLK1(1)    <---------ARR14(2)  <---------ANAC58             <---------At4g35610  <---------ANAC46     <-----------HVH21             --------->HSFC1(1)  <---------ANAC58  <---------MYB52(1)--------->ANAC58          <----------DOF2        --------->ANAC55(2) ------HSFC1(2)<---------ARR14(3)  --------->ARR14(2)--------->HSFB2a(2)           <----------DOF2 ----->HSFC1(2)--------->ARR11(3)----------->ARR10   <---------HSFC1(1)          ---------->ID1 --->DOF2     <---------GLK1(1)<-------GAMYB         <---------HSFB2a(2)     <----------DOF2   gcttccttgaattcggagatctgttcgtcagtgagttgatccgccatagcttcttcgagaaatcgtctttcttctcttcctttgtctttacttaatgagt  15023400                                                               <----------ID1                                                        --------->ANAC58                                                        --------->ANAC58                   ----------                                                        --------->ANAC46           ----------->GT1                                                   <-----------ARR10              --------->DAG2                                                   --------->ARR11(3)           ---------->DOF2                                   *TSS            <---------ARR11(3)       <------ZmHOX2a(1)                             <----------DOF2      --------->RVE1(1)        ----------->GT1-----------                       <---------CCA1(2)          --------->CCA1(1)  ---------->DOF2 <--------P   tttttttttttttggattcagagtcgtctctctttgaaaatgatgcaaacaaatatctaagcaaaacgacaaaaagaaggagaaaaggtaagtcggaaaa  15023500                                                                                          <---------YAB1                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   --------->YAB1                                                                                <---------ICU4                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)                                                                               <---------ATHB51                                                                               --------->ICU4 <------                                                                              --------->AHL20(2)                               <---------HSFB2a(2)                            <---------AHL20(1)                               --------->HSFB2a(2)                           --------->YAB1  <-------                        <---------AHL20(2)                     <---------AHL20(2)  <---------AHL20(2)                        --------->AHL20(2)                 ----------->GT1===========================                  <---------AHL20(2)               --------->YAB1   <---------AHL20(2)    <---------AHL20(2)                 --------->AHL20(2)              <---------AHL20(2)<---------AHL20(1)  <---------AHL20(2)                 <---------AHL20(1)              --------->AHL20(2)<---------AHL20(2)  --------->AHL20(1)                 <---------AHL20(2)           --------->AHL20(1)   --------->AHL20(2)  --------->AHL20(2) ->GT1          <---------ATHB12          <-------TEIL ---------->DOF2    --------------->AGL15  <--- >GT1       ------------>CBFxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->AHL20(1)  <---------AHL20(1)   attccaaacaaaaacccaattaatttttaatttttagaagaaaatacatatattaataaaagtgtataatttaataccaaaataattaaaatattattac  15023600                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                        <---------AHL20(2)                                                    --------->AHL20(1)                                                    <---------AHL20(1)              --------->ARR11(3)                  --------->AHL20(2)                --------->AHL20(2)              <---------AHL20(1)               --------->YAB1                       <---------AHL20(2)              <---------AHL20(2)      <-----------GT1   <---------YAB1             --------->AHL20(2)               --------->AHL20(1) -----GT1   --------->TOE2(3)                      <---------AHL20(2)     <----------DOF2 --YAB1  --------------->AGL15                  <---------AHL20(2)        <---------DAG2           -- ========================MADS_MADS<-------GAMYB--------->AHL20(2)      <-----------GT1            <-- -------DOF2<----------DOF2------->TEIL  ----------->HVH21          <---------ICU4 --------->ICU4 <--   ttttatatttactactttaataaactatgaatttttcgttgatatgacattaattttatttattttttaaaaattacttttagtaatattttgtttctat  15023700            <---------AHL20(2)            <---------AHL20(1)         --------->AHL20(1)        --------->AHL20(2)                                 <---------AHL20(1)        <---------AHL20(2)                                 --------->AHL20(1)       <---------AHL20(2)                                  <---------AHL20(2)     <---------ICU4                                <---------ARR11(3)                     -----------    --------->ICU4                                 --------->ARR11(3)          <---------ARR11(3)   <---------AHL20(2)                             --------->GLK1(1)            --------->ARR11(3)  --  --------->YAB1                                  <---------GLK1(1)           --------->YAB1     <--- <---------YAB1                              ---------->DOF2             <---------ARR11(3)      <--- ------->YAB1  <---------YAB1      --------->AHL20(1)      --------->AHL20(2)<---------YAB1      ---- -------YAB1--------->AHL20(2)     --------->AHL20(2)--------->YAB1  ---------->DOF2    ------->TEIL -------AHL20(2)                   <---------AHL20(2)--------->TOE2(3)   --------->ARR11(3)     -----   attataaaaattattttatttttaaaattcacataaataaaatgagcaaaagaaatcttaataaattttgaaaaagataatgatattgtgaaccgaaata  15023800                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------At4g35610                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->At4g35610                              <---------ANAC46                        <    ---------->DOF2                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    -  <---------AHL20(2)                                      ------->TEIL                              -  --------->AHL20(2)                                    <---------SPL7                   --------->LBD16  --------->YAB1                                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  -------- >GT1--------->DAG2                          ----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <- ------->YAB1                     ------->TEIL        <---------------AtSPL3            --------->HSFB2a(2) ------AHL20(2)                ----------->GT1        xxxxxxxxxxxxxxxx>smallRNA(i)      <---------HSFB2a(2) ------YAB1<---------ZAT2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ----------->GT1    <---------LBD16 ----->AHL20(2)           --------->ANAC46  <---------TOE2(3) <---------MYB52(1) <---------DAG2    -- ---->TOE2(3)     <---------------------WRI1<---------TOE1(3)<-------GAMYB       <----------DOF2  ---   ttaataaaaagttagctgatgttgatatacacaatgtaacttagttgaggtataaaaacgtaccgttgagaggttgaacttcacttttttccggaagatg  15023900  Previous    Next  AGI:  At5g37780.1    Description:  CAM1 (CALMODULIN 1); calcium ion binding. Identical to Calmodulin-1/4 (CAM4) [Arabidopsis Thaliana] (GB:P25854;GB:Q03510;GB:Q9FJ05); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to Os05g0491100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055907.1); similar to Calmodulin (CaM) (GB:P17928); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 15021757    to: 15023435    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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