Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>MYB46(1)                                                   ------>MYB83                                                 --------->AtMYB61                                                 <---------MYB111(1)                                               ------>MYB83                                               ------>MYB46(1)                                               -------->P                                              --------->MYB55(1)                                        <---------MYB52(2)                                       --------->ANAC58                            <---------ANAC58 <---------MYB111(1)                            <---------ANAC46 --------->TOE1(2)                   <----------DOF2 <---------HSFB2a(2)                                 <-------TEIL                   ------>ZmHOX2a(1)   --------->ANAC58                              <---------ARR14(2)      <-----------GT1  <-----------RAV1(1)<-----------GT1                            --------->ARR14(2) ---ANAC58       ------>ZmHOX2a(2) --------->HSFB2a(2)                               <---------GLK1(2) ---ANAC58 <----------DOF2  <---------ANAC58 <---------MYB59                 --------->ZAT6   -------   gtcgagttttacgctttgatcctttgtgttgcttcttctgtaagtaacctaccaactcagaaaaacagagcttaaactaaaactacagattcacacacag  14659300                                    <------ZmHOX2a(2)              <---------ICU4                                   <---------ARR11(3)             <---------YAB1                             <---------At5g28300         <---------HSFB2a(1)                       <---------YAB1                    --------->HSFC1(2)                   <---------WOX13(1)--------->YAB1      <---------HSFC1(2)        --------->ZAT6 -->ANAC46       --------->ATHB12  --------->ARR11(3)    --------->HSFB2a(1)    --------->WOX13(1) <-   agctatcttcaaatgtgaaagattgattattcaccgagatcatcatcttcatcaagagaagcttcttcatcatcgttcaaatctatcacttcaatagcac  14659400                                                                                                 ----                                                                                             --------                                               <---------ATHB12                        --------->DAG2                                              -------->P                              ---------->DOF2           ---------->DOF2                   <-----------GT1                      --------->AHL20(2)  <---------YAB1                             --------->WOX13(1)       --------->AHL20(2)----------->GT1 --------YAB1                   <---------At4g35610     ---------->DOF2      --------->LBD16 <-------   cattatcgttctctaaagcctctagcctagctatagcagcctagaatcaaccatttttgaaagacgattcaattttttccgaaataaaaaaagtgaatcc  14659500                                                 ------>NtERF2                                                --------->ATERF1(2)                                                --------->DEAR3(1)                                                --------->ANAC46                                                <---------ATERF1(2)                                                --------->RAP2.6(2)                                                --------->RAP2.3(3)                                                --------->DREB2C(2)                                                --------->RRTF1(2)                                                --------->RAP2.3(2)                                                --------->RRTF1(3)                                               --------->ORA47(2)                                               --------->RAP2.3(1)                                               --------->ERF1                                               --------->DEAR4(2)                                               --------->RAP2.6(1)                                               --------->ATERF1(1)                                               <------NtERF2                                              <---------DREB2C(1)                                              <---------DEAR4(2)                                              --------->DREB2C(1)                                              --------->At4g35610                                              <---------RAP2.3(1)                                              <---------ATERF1(1)                                              ------>NtERF2                                             --------->RAP2.3(3)                                             --------->RAP2.6(2)                                             <---------DEAR3(1)                                             --------->DEAR3(1)                                             --------->RAP2.3(2)                                            --------->RRTF1(1)                                            --------->DEAR3(2)                                            --------->ATERF1(1)                                ------                                            --------->ERF1                                  ---------                                            --------->RAP2.3(1)                             <--------                                  <---------ANAC58                                          <--------                               <---------MYB52(1)<---------ATERF1(1)  <---------ANAC58      ---------                              <-------GAMYB<---------ATERF1(1)        <---------ANAC58      <--------              --------->At4g35610 <---------ANAC46                 <---------SPL7           <-------- ----->LBD16  <---------At4g35610 <---------ANAC58<------NtERF2------------------>SPL14    <---------DEAR3(1) ->ARR14(2)   ----------->RAV1(2) --------------------->WRI1 --------->DEAR3(2)          ------------ --ARR14(2) <-----------GT1  <---------MYB46(3)--------->RRTF1(1) <---------DAG2        ----------->HVH21   gaaaatcaacaatttcacctgagttcgattgtcgttgcttgtaagagccgccgccatcttcgtagcgaccttacgagtccgatttgatactcgacggttc  14659600                                           --------->TOE1(2)                                          --------->HSFB2a(1)                       ------>NtERF2                                          <---------HSFB2a(1)                      --------->DEAR3(1)                                         --------->SPL7                           <------NtERF2                                         ------->TEIL                             --------->ATERF1(1)                                       <---------SPL7                             --------->RAP2.3(1)                                     <------NtERF2                                <------------------                                     --------->ATERF1(1)                         ------>NtERF2                                    ------>NtERF2             --------->ARR14(2) <---------ATERF1(1)                                    --------->LBD16           <---------ARR14(2) <---------RAP2.3(1)                                   <---------DEAR3(1)         <---------GLK1(2) <---------DEAR3(1) --->SPL7                         <---------LBD16          <---------ANAC46    --------->ATERF1(1) >HSFB2a(1)      --------->LBD16  <---------ANAC58      --------->DEAR3(1)    <---------ATERF1(1) -HSFB2a(1)     <---------HSFB2a(2)--------->ATERF1(2)  ----------->HVH21     ------>NtERF2 -DEAR3(2)      --------->HSFB2a(2)<---------ATERF1(2) --------->DEAR3(2)    ----------->HVH21 >HSFC1(2)      --------->LBD16   <---------ANAC58     <---------At4g35610   --------->DEAR3(1) -MYB46(3)     <---------LBD16 <---------WOX13(1)      <------NtERF2  --------->DEAR3(2)      <------ -HSFC1(2) <---------ALFIN1  <<<<<<<<<RAP2.2           --------->At4g35610 ------>NtERF2      <------ >AtMYB77------>ZmHOX2a(1)  <---------TOE2(3)       --------->ZAT18   *TSS--------->DEAR3(1)  -------   gacatctcttcctccatcccggaaaatgtttagattgccggcgaacgttggaagcgcagcgacggattttgaatcgacgacgacggcgactatttttagg  14659700                      ---------->ID1     --------------->AGL15     <---------------AGL15     <---------HSFB2a(2)     --------->HSFB2a(2)     --------->HSFC1(1)   <------------CBF                  --------->YAB1     <---------HSFC1(1)>>>>>>>>>>>>>>>>>LFY            ------------>CBF ---WRI1              ------>NtERF2               --------->ANAC58 ---TOE2(3)        --------->SPL7               ---------->DOF2               --------->At4g35610 ---TOE1(3)       <---------MYB52(1) <-----------GT1  ----------->RAV1(1)     <---------At4g35610 -->MYB59       <---------DEAR3(2)<----------DOF2 --------->ANAC58    --------->YAB1    <---------At4g35610   ttgttttctagaaatagtctgttcggcccattgggcctttaacaacttactaaagccaacaatgaaaatgaaacatgatcagctaaattaagctgtttct  14659800                                                                                                -----                    <------MYB83                                           --------->YAB1       <----                    <------MYB46(1)                                        <--------ATHB1     -------                   --------->MYB59                                        <---------ATHB12    -------              <---------YAB1                                              <---------ATHB51    -------            <---------AHL20(2)                                      --------->At4g35610  --------->ANAC46           <---------AHL20(2)                    xxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <-----------GT1           --------->AHL20(2)          --------->CCA1(2)     --------->AHL20(2)    <---------ARR11(3)   atattggaagttatttattattaggtcgtaatcgattttggatacaactaaaaaaaaaaaaaaaaaaatcatctcaataatacaagattatacaacacga  14659900                                                                        <---------ICU4                                                                        --------->YAB1                                                                       <---------ATHB51                                                       --------->ICU4  <---------ATHB12                                                       <---------AHL20(2)                                                       --------->AHL20(2) <---------YAB1                                                  --------->ANAC58     --------->ICU4                                                  --------->ANAC58   --------->WOX13(1)                                               ------>ZmHOX2a(1)    --------->AHL20(2)        ---------->DOF2                    <---------ARR14(2)      <---------ATHB12 ---->ARR11(3)      <---------ATHB12       --------->ARR14(2)    ------>MYB83 -----ARR11(3)    ------>MYB83             --------->GLK1(2)     ------>MYB46(1) -->ANAC46        ------>MYB46(1)       --------->ANAC58       --------->TOE2(3)                   -- -->ANAC58      <---------MYB59<---------YAB1 --------->TOE2(3)<---------MYB59                  ----- -->ANAC58      --------->TOE2(3)       --------->ANAC58    <-----------GT1                   -------   tattcaaactaaaagaaacctaatcaaatgtttttgattcacaagaatcctcaagaaaaaattaacctaatcaattatgagagtgagaccaaggagataa  14660000                                                                                ------>MYB46(1)                                                                                ------>MYB83                                                                              --------->DEAR4(1)                                                                              --------->MYB46(3)                                                                              <---------MYB46(2)                                                                              --------->DEAR3(1)                                                                           <---------ALFIN1                                                                          ------>MYB46(1)                                                                          ------>MYB83                                                                          -------->P                                                                         ----------->RAV1(1)                                                                         ========================RAV                                                                        --------->AtMYB61                                                                        --------->MYB46(3)                                                                     --------->DEAR3(1)                                                                     <---------ALFIN1                                                                     --------->AtMYB61                                         <---------DAG2           --------->REM1(1)  ----------->RAV1(2)                                --------->AtMYB61                 <---------ALFIN1--------->HSFB2a(1)                               --------->MYB46(3)    ------>ZmHOX2a(1) --------->MYB46(3)                          --------->ANAC58       --------->ARR14(2) --------->MYB46(3)       -------- ----->TEIL               --------->ANAC58<----------DOF2     <---------At4g35610 --------->HSFC1(2) ------>ARR10         --------->AtLEC2<---------ALFIN1        --------->At4g35610 <---------HSFC1(2) -->CCA1(2)--------->YAB1 --------->ANAC46<---------DAG2  <-----------RAV1(1)--------->DEAR3(2)   gaacctcttgtaatcaaacttgccattcaagaaaccatcaccacctttttggttcctcacttgttgctgcaccaccaacaccgacccttctgaggcaaag  14660100                                                             --------->TOE1(3)                                                   <-------MYC3                                                   ------->MYC3                                                   ------->MYC4                                                   <-------MYC4                                                   <-------PIF5                                                   ------->MYC2                                                   <-------MYC2                                                  <---------PIF3(3)                                                  --------->O2                     ------>ZmHOX2a(2)                                                  --------->PIF3(3)          <-------GAMYB                                                  ===================================MYC_MYB                                                  =====================================MYC_MYB       --------->MYB46(3)           <---------AtMYB61----------->GT1    ----------------------->TaNAC69(2)      ------>NtERF2              --------->ALFIN1 <---------TGA1a      --------->ATHB12     --------->DEAR3(1)          <---------MYB46(3)------->PIF5      <---------ARR11(3)     --------->ANAC46          <---------At4g35610<---------O2       --------->ARR11(3)             -  --------->ANAC58             <---------ZAT2     --------->TGA1a    --------->GLK1(2)             <-  --------->ANAC58             --------->ZAT2   <---------ALFIN1    <---------GLK1(2)             --- -->DOF2              <---------ATHB12       --------->ANAC46--------->TOE2(3)<--------P        <----   acgctcgcagccacggtgtctccaatgactccgagctggtggtcttcgctccacgtggataaaccttcaagaatctttgggttgatcccttctcttcttc  14660200  Previous    Next  AGI:  At5g37055.1    Description:  ATSWC6. similar to zinc finger protein [Nicotiana benthamiana] (GB:AAW83129.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23542.1); contains InterPro domain Zinc finger, HIT-type (InterPro:IPR007529) Range:  from: 14658781    to: 14659670    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g37060.1    Description:  ATCHX24 (cation/hydrogen exchanger 24); monovalent cation:proton antiporter. similar to ATCHX25 (cation/hydrogen exchanger 25), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT5G58460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21375.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 14659971    to: 14662644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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