Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <-------TEIL                              --------->CCA1(2)                             <---------ARR14(2)                             --------->ARR14(2)                           ----------->ARR10                       ----------->GT1                                                         <-----                <---------------AGL15                                                    --------->ANAC58                --------------->AGL15                                                    --------->ANAC46                --------->TOE1(3)           ------>ZmHOX2a(1)                            --------->ANAC55(1)  ------->GAMYB --------->TOE2(3)          --------->TOE2(3)         <<<<<<<<<<<<<<<<<LFY<---------ANAC55(2) ------->P     ----------------->AGL2 --------->MYB46(3)    --------->TOE1(3)            --------->ANAC58 ----->MYB46(1)<-----------------AGL1------>MYB83           <---------MYB59         ---------->DOF2 ----->MYB83   <-----------------AG ----------->RAV1(1)     --------->TOE2(3)      --------->AHL20(2) -------ALFIN1 ----------------->AG--------->AtMYB61 --------->HSFB2a(2)    ----------------------->TaNAC69(2) -----HVH21    ----------------->AGL1------>MYB46(1) <---------HSFB2a(2)   <---------MYB46(3)  <-----   ccaacccaaaaacaaaaaccctaatgggtaagatacaccaacaatcctcaatctactagaaacctaaatccatacaatggttcaataaaagacgcaactt  13784700                                                                                   --------->HSFB2a(1)                                                                                  <---------ARR11(1)                                                                                  <-----------ARR10                                                                                  --------->GLK1(2)                                                                                  <---------ARR14(2)                                                                   <---------DOF5.7(2)                                                                   --------->MYB52(1)       ---------                                                              --------->HSFB2a(2) --------->ARR14(2)                                                       <----------DOF2            ------->TEIL <-----                                                      <---------HSFB2a(1)        <---------CCA1(2)                                                      --------->HSFB2a(1)        <---------GLK1(2)       --------->TOE2(3)                              --------->HSFC1(2)         <---------ARR14(1)       --------->TOE1(3)                 <-------TEIL <---------HSFC1(2)--------->ANAC46    --------- -----DOF2                     ---------->DOF2      <---------ARR11(3)  --------->ANAC58    --------- ----DAG2                    --------->YAB1        <------ZmHOX2a(1)    --------->ANAC58   <---------TOE1(2)   ttttgcaaaccctaaaaaaaacgagagacaatgaaaagagagattcactcacaggaactttcttctgggtaacgacgcaaaccgaatctttcccacgaac  13784800                                         <---------ARR14(2)                                         --------->KAN4(2)                          --------->ANAC46             ---------->DOF2                          --------->ANAC58         --------->ANAC58                         <---------At5g28300       --------->ANAC58                        <-----------GT1  --------->ARR14(2)                       <---------REM1(2)<---------KAN4(1)                <---------ZAT2          <----------TaMYB80 >ANAC58        --------->ZAT2          --------->KAN4(1)                            --------->DAG2 ----GLK1(1)    --------->At4g35610    ---------->TaMYB80                           ---------->DOF2 >ANAC46        <---------At4g35610    <---------KAN4(2)--------->DAG2        <---------ZAT2 >ANAC58   <-----------GT1--------->ANAC58       ---------->DOF2              --------->ZAT2      ---   tccgattgaagtaataccagctgttttcacggccttgaaggcatattctacaaaagcaaaagtgtgtattcagttttcagagctcgaaaaggaattgaga  13784900                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                               --------->RAP2.3(2)                                                                              <------NtERF2                                                                   --------->YAB1     ------>ZmHOX2a(1)                                                                  <---------YAB1<---------ATERF1(1)                                                                  <------ZmHOX2a(2)   ===============                                                                  ===========================HOX2a_HOX2a                                                            ----------->HVH21 --------->ORA47(2)                                        <---------LBD16   <---------bZIP60(2) --------->RAP2.3(1)           <---------ZAT14             ------>MYB83<---------ARR11(3)         --------->DEAR4(2)           --------->ZAT14             --------->MYB52(1) <---------bZIP60(1)<---------RAP2.3(1)           --------->ZAT18---------->DOF2 --------->LBD16 <---------O2      --------->DEAR3(1)   <---------ARR14(2)-------->P--------->CCA1(2)   --------->ARR11(3)   --------->MYB46(3)   --------->GLK1(2) ------>MYB46(1)   ------>MYB46(1)    --------->bZIP60(1)------>NtERF2 ------>ALFIN1       ------>MYB83    --------->AtMYB61   <-----------------------TaNAC69(2)   gtgggaatcggagagtactgaccaacttgaaagagacgaccttccggtgagaagatagtgatgtgacgatcataaccagcgccgcttcctctactcatct  13785000                  --------->ALFIN1                <---------ANAC46            --------->ARR14(2)            <---------ARR14(2)       --------->At4g35610                           <------ZmHOX2a(1)            --------->ANAC58     ------>ZmHOX2a(2)                            --------->YAB1                  --------->ANAC46   <---------ARR11(3)                          --------->YAB1           <---------DAG2   --------->ARR11(3)<---------ANAC46<---------ANAC46*TSS   <------------CBF      --------->ANAC58 ===========HOX2a_HOX2a            <---------ANAC46<---------TOE2(3)    <----------DOF2        ------   tcttcgatcttctgaattcggtggagttgaatcagagatgtgtatataacaataaggaatggaattgaatcaagctttatgtccaagacagaagaaaaaa  13785100                                                                    --------->GLK1(1)                                                                    --------->CCA1(2)                                                                    <---------GLK1(1)                                                                   --------->ARR14(2)                                                                   --------->ARR11(3)                                                                   --------->ARR11(1)                                                                   <---------ARR11(3)                                                                   <---------ARR14(2)                                                             <---------DAG2                 ---------                                                             <----------DOF2             --------->WOX13(1)                                                          <---------------AGL15        <---------ATHB12                                                     <---------At4g35610              --------->ANAC58                <-----------GT1          <----------DOF2  <---------ALFIN1            --------->ANAC58       --------->ALFIN1         --------->YAB1       --------->At4g35610   <----------DOF2 <---------ATHB12       <---------AtMYB61<-----------GT1  <---------DAG2   --------------->AGL15      --------->WOX13(1) ---->DOF2<---------ANAC46   <----------DOF2   <-----------GT1   <---------TOE2(3) <-------TEIL    <-   agagtcgaggtggtgtttttactattttgccctttgatgaccactttatttactcttctgccactttaagatatgcgatttaagatgcaatcaatcatat  13785200                                                    <----------DOF2                                          <---------AHL20(2)                                     --------->ICU4 --------->TOE2(3)                           <---------AHL20(2)   <---------GLK1(2)                 <-----------GT1     --------->ARR11(3)             ------->TEIL  --------->AHL20(2)   --------->ARR11(3)                              <----          <---------ANAC55(2)        <---------ARR11(3)                                        <-----    >>>>>>>>>>GT-3b       --------->AHL20(2)---------->DOF2   <---------YAB1                   <----- ----------->GT1<---------AHL20(2)   --------->AHL20(1)     ----------->GT1   <---------YAB1   ------ >YAB1    --------->ANAC55(2)   ----------->GT1 <---------ARR11(3)        <----------DOF2   --------- -----ZmHOX2a(1)--------->AHL20(2)   <---------AHL20(1) <---------YAB1 <-----------GT1 --------->ICU4   aggaagaaaaatatgtatttaactaaaattaaaatggaaaatattaaaaagatactttaaaattgttataagtttactttcttattacaaagattaataa  13785300                          <---------AHL20(2)                      <---------YAB1                   <---------AHL20(1)                   --------->AHL20(2)                 --------->CCA1(2)            <---------TOE2(3)                        <---------ARR11(3) -----AHL20(2)     <---------AHL20(2)                --------->ARR11(3) ----AHL20(2)      --------->AHL20(1)      --------->YAB1          --------->ANAC55(2) ----AHL20(1)     --------->AHL20(2)      <---------YAB1          <---------TOE2(3)           ------- --->AHL20(2)   ------->TEIL          <---------AHL20(2)  <-----------GT1  <xxxxxxxxxxxxxxxxsmallRNA(s) >YAB1     --------->MYB52(1) --------->YAB1     ---------->DOF2  --------->MYB59  ----------->GT1   aatttctaatttctaacgaattttatttttaatcacaaatttttatgaaaataaagatataaactatttaggtatcgatgaaagtttgtgaaaacattgt  13785400                                            --------->ETT(2)                                          <-----------GT1                                        <---------AHL20(2)                                     <---------AHL20(1)        ------>ZmHOX2a(2)                   --     <---------ZAT14                 --------->AHL20(2)       <------ZmHOX2a(2)                    --     --------->ZAT14                 --------->AHL20(1)<---------ANAC58              ----------->GT1 ---->GT1                        <---------ZAT6        <---------ANAC58 ----------->RAV1(1) <--------   aatacagtttagagaaacttttgaagaaaattttagtgatatattatcgacacattgtcttgagatcggattagccacatagtaagttagtaatttgttg  13785500                                     ----------->HVH21                                --------->ANAC46 <---------ANAC55(2)                                --------->ANAC58 <---------ANAC58                                --------->ANAC58 --------->ANAC55(2)        --------->YAB1      <---------ZAT6       <---------ANAC46 <---------ARR11(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                   ---------->DOF2 ------->ANAC58         <---------YAB1           <---------ANAC55(1)              <---------YAB1 ------->ANAC58     ----------->RAV1(1)     <---------ZAT6                    <-------GAMYB ---RAV1(1)    --------->WOX13(1)    --------->O2<---------ANAC58   <---------AHL20(2)        -------   caagaactgatcaaaatcaatccaacatgagtgtaagccacgacgagtgtaacgtatgggaattgagtattgaatttgtgggttatgaaagaagaaatgt  13785600  Previous    Next  AGI:  At5g35590.1    Description:  PAA1 (20S proteasome alpha subunit A1); peptidase. Identical to Proteasome subunit alpha type-6-A (PAA1) [Arabidopsis Thaliana] (GB:O81146;GB:O23713;GB:Q8RWN8); similar to PAA2 (20S PROTEASOME SUBUNIT PAA2), peptidase [Arabidopsis thaliana] (TAIR:AT2G05840.1); similar to Proteasome subunit alpha type-6 (20S proteasome alpha subunit A) (20S proteasome subunit alpha-1) (Proteasome iota subunit) (GB:O48551); contains InterPro domain Proteasome alpha-subunit, conserved site; (InterPro:IPR000426); contains InterPro domain 20S proteasome, A and B subunits; (InterPro:IPR001353) Range:  from: 13782368    to: 13785053    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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