Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------AHL20(2)         --------->ANAC58  --------->AHL20(1)   ------>NtERF2  --------->AHL20(2)   <------NtERF2  <---------AHL20(1)  --------->DEAR3(1)         --------->ZAT6  <---------AHL20(2)<---------LBD16             <---------TOE2(3)       <---------DAG2 ------GT1     --------->ARR11(3)            --------->AHL20(2)   ----------->HVH21  <-----------GT1 --->YAB1      <---------ARR11(3)   --------->YAB1--------->TOE2(3)     <----------DOF2      -------- >YAB1    --------->TOE2(3)   --------->ANAC58 <-----------GT1 <-----------GT1    <---------ICU4   caaatttattagcctaaaatctcgcggcccaaacccaattacaagaatttaacattagtgactatttactgacacttttgcgactaattacaaacttatt  11576000                                        <---------ARR11(3)                                        --------->ARR11(3)                             ---------->DOF2                           <---------AHL20(2)                           --------->AHL20(2)   <---------At5g28300                 --------->MYB46(3)                     --------->YAB1 <---------AHL20(2)                              <---------MYB111(2) ->ATHB12     ------>NtERF2--------->YAB1      <-----------GT1           --------->ATHB12    ------>NtERF2   gggcccaaaaactcgaggcccaaacacaattaaaagaattaatatctagttacagttttgcgactaatatcaaacttattgggccaacaacttgaggccc  11576100                                                                                   <---------TOE1(3)                                                                                   <---------TOE2(3)-                                    --------->ANAC58                          <----------DOF2      --                                    --------->ANAC58                      ------>MYB83            ---                                   --------->SPL7--------->ANAC46         ------>MYB46(1)         <--                                 <---------SPL7<---------ALFIN1           -------->P              <-- ---------->DOF2        --------->GLK1(2) ------>NtERF2                  <---------ALFIN1   <--------   aaacaaagtcgcgactaaaactcaaaattctggcccgaacgcgaggcccataccctacttcaacaattctaaaccctacccttttaagggtttttttctt  11576200     ----------->HVH21   <---------ZAT2   <---------At4g35610                                                 <----------DOF2   --------->At4g35610                                        <----------DOF2   ----------->RAV1(2)                                        ------>ZmHOX2a(1)               -------   --------->ZAT2                                             ===============HOX2a_HOX2a      <------ <-----------RAV1(2)                              <----------DOF2     ==========================HOX2a_HOX2a -------->LBD16                               ------>ZmHOX2a(1)       ------>ZmHOX2a(2)      ------>MYB83 ------->ANAC46                               ===============================HOX2a_HOX2a     ------>MYB46(1) ------>HSFB2a(2)                    ------>ZmHOX2a(2)  <-------TEIL--------->ARR11(3)       -------- -------HSFB2a(2)      --------->WOX13(1)  <------------------------ANAC81                 <---------MYB111(2) -------LBD16       --------->ANAC58 ================HOX2a_HOX2a    <---------ARR11(3)   ------>ZmHOX2a(1) ---GT1             --------->ANAC58 ================================HOX2a_HOX2a<----------DOF2   cccgcagctgacttcgaaaccctagcaatctctcttcgatctctcttcctctctttgattcatccttttcgatctttcttctctttgattcctccaacca  11576300 -->MYB46(3)                                                      <---------ATHB12 ---ATHB12                                     <----------DOF2------------>CBF >P                                  ------------>CBF  <-----------GT1             <---------ICU4   tttcgattcaaactcacattgtattttcaaaatcaaactcacaatctctctttgatttcacactctcaatctttcttcgatttcatacttacaaactctc  11576400                                                                                            <--------                                                                                           <---------ALFIN1                                                                                           ----------                                                                                          <xxxxxxxxxx                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR14(2)                                                                                        <---------TCP20                                                                                        --------->ARR14(2)                                                                                        <---------TCP16(1)                                                                                       <---------ARR14(1)                                                                                      --------->LBD16                                                                                    <------NtERF2 ---                                                          <---------ALFIN1          <---------LBD16<-                                                          --------->AtMYB61        --------->MYB52(1)                                                     --------->DEAR3(1)            ------>NtERF2 ----                                 *TSS               <------NtERF2              --------->ANAC46  <---                               --------->ATHB12   <---------DEAR3(1)           --------->ANAC58 <----                     <-----------HVH21         --------->DAG2   =================================HOX2a_HOX2a                     --------->LBD16      <------ZmHOX2a(1)     ================================HOX2a_HOX2a                    --------->ANAC46     ----------->GT1 --------->MYB46(3)    --------->ANAC58<-----             <-----------GT1  <---------YAB1  ---------->DOF2   ------>ZmHOX2a(1)--------->MYB46(3)<-   tcagtctccagcatttttctctccgtcaaacgatgtttgggcgaggaaaaaagcggcgaaccactcctaaacttgctcatcaagccaccggatccacggt  11576500                                              --------->At4g35610                                              <---------At4g35610                                              --------->ZAT2                                           <---------At4g35610    --------->ETT(2)                       <---------ZAT2    ----------->HVH21                      --------->ZAT2   --------->SPL7                          <------NtERF2 <---------SPL7                           ------>NtERF2 -LBD16                                  <-----------RAV1(2) -->AtMYB77              --------------->AtSPL8 xxxxxxxxxxxxxsmallRNA(se3)           --------->ANAC58 ------>At4g35610        <---------------AtSPL3 --------ANAC58      --------->LBD16  --------->ANAC46 ----->MYB55(2)      ------>NtERF2    --------->ANAC58    ------->GAMYB                         ----- ------MYB46(3)    <---------LBD16<---------DAG2    --------->ANAC46                 ------>MYB83 ----P       <---------ZAT14      <----------DOF2   --------->ANAC58         ---------->DOF2--------- --GAMYB   --------->ZAT14   --------->SPL7--------->At4g35610 --------->At4g35610   ------>MYB46(1) --------ANAC58  ----------------------->TaNAC69(2) --------->ANAC58       ------>ZmHOX2a(1)<--------   tgctggacgaccgagtactcttccggctcagtacgactttacgccagcagctcaacgtaaccctctgcttcagagtcctgaaagaccagcctccgttcct  11576600                                      --------->LBD16                                     --------->DEAR3(1)                                     <---------ALFIN1                                     --------->ANAC46                                 --------->MYB46(3)                               -------->P               <---------At4g35610 <---------ATERF1(1)           ------->GAMYB     <---------MYB111(1)        <---------DOF5.7(2)<---------ARR14(2)                               --------->TOE1(3)       <---------WRKY45 <---------HSFB2a(2)                                 --------->TOE2(3)       <---------WRKY12 --------->ANAC46                                    --------->AtMYB61       <---------WRKY38(1) --------->ARR14(2)                          --------->At4g35610      --------->WRKY18(1)--------->LBD16                        <---------MYB52(1)                 --  <---------ZAT14       --------->HSFB2a(2)----------->RAV1(1) --------->LBD16                    <--  --------->ZAT14      <---------LBD16------>NtERF2           <---------ANAC55(2)                 <--  <-------TEIL --------->At4g35610--------->ANAC46            <---------ANAC46           <------ZmHOX2a(1) ->ZmHOX2a(1)  <---------ZAT2<---------MYB52(2)               --------->ANAC55(2)    ================ >ARR14(2)--------->MYB46(3) --------->MYB46(3)          <---------ALFIN1 -------->P ---------->DOF2 -MYB52(1)--------->ANAC46 <-----------ARR10    <---------MYB52(1)     <---------At4g35610        <--   caagtacagtcaacgacagctcatgtccggaactaccctccgcctcaacagttattccagcactccgtgattcagcaacctcaactacaaaggacttctt  11576700                         <---------ATERF1(1)                                     <---------ARR14(2)                      <-----------HVH21                                          --------->ARR14(2)                     --------->bZIP60(2)                                        <---------MYB52(1)                     --------->TGA1a          ------>NtERF2                    <---------DEAR3(2)                     <---------O2    --------->ANAC58                          <---------ATERF1(1)                     --------->O2 <---------At4g35610                       <---------ZAT2          -            --------->GLK1(2)  ------>ZmHOX2a(1)                  <---------ALFIN1     <---------ALFIN1 ------->LBD16       <---------TGA1a --------->ANAC58  <---------ZAT2       <---------At4g35610     - -------ANAC46  --------->ANAC58  --------->ZAT2       --------->ZAT2    ------>ZmHOX2a(1)         xx -------ANAC58  --------->ANAC46  <---------ZAT2    ------>ZmHOX2a(1)<---------ALFIN1------>ZmHOX2a(1) ==============================bZIP_DOF <---------ALFIN1    ---------->ID1<-----------RAV1(2) ------>ZmHOX2a(1) -------ANAC58  --------->ANAC58  --------->At4g35610  <---------At4g35610---------->CDC5 <---------ALFIN1   ccgtagaagtccagaatcaagccacgtcgactcctcagctagccactccgactcctcagcttgtccctccaactcctcagccggttcctccaactcctca  11576800                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                 ----                                                                                                 ====                                                                                                 ====                                                                                                <----                                                                                                <----                                                                                                =====                                                                                                -----                                                                                                =====                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                                                             --------                                                                                           <------NtERF2                                                                                           <---------LBD16                                                                                           --------->ATERF1(1)                                                                                          ------>NtERF2                                                                                          <---------RAP2.3(1)                                                                                         --------->ETT(2)           <---------DAG2                                --------->ANAC58                <---------DEAR3(1)         ------>NtERF2                                   --------->ANAC58                <---------ETT(2)         --------->LBD16                            ------>ZmHOX2a(1)                  <-----------HVH21        <---------ALFIN1                        --------->ARR14(2)                    ===============        --------->DEAR3(1)                      ------>MYB83                          <-----------RAV1(1)      <---------ATERF1(1)       <---------TOE1(2) <-----------------AGL1            =================  <---------ARR11(3)           <---------ANAC46 <---------ARR14(2)          <---------At4g35610<----- -------->ANAC58              <---------LBD16<---------ANAC55(2)         <---------At4g35610<-------- -------->ANAC58          <---------GLK1(2)  --------->ANAC55(2)   <----------DOF2  ================= xxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <-------TEIL------>MYB46(1) <---------ARR11(3)  ------>ZmHOX2a(1)   gcaagaccctccgccttctccagttcaagagtctcgggttcacaatcacctatcctctcaaggcaataactttgatgctgatgctcctctgtcgccggat  11576900  Previous    Next  AGI:  At5g30450.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 4.3e-19 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 11576433    to: 11579181    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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