Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------GLK1(2)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                --------->HSFB2a(2)       <-------TEIL                                <---------HSFC1(1)       <--------P          <---------------AGL15                                <---------HSFB2a(2)    ----------->GT1       --------------->AGL15                                --------->HSFC1(1)    <---------TOE2(3)      ======================== -->ANAC55(2)               <----------DOF2           <---------TOE1(3)     --------->ZAT6 ---ANAC55(2)           <----------DOF2        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)----------->GT1 -HVH21             <----------DOF2 --------->GLK1(2) --------->DAG2     <---------MYB52(1) <--------   attttttatatgatatataaaactttctttctttctagaatccatggctcttgtataaggtagattgtctaactcgttactctagatagtatattatatg  10925200                     --------->TOE2(3)                     --------->TOE1(3)                  <-----------GT1                   --------->AHL20(1)              --------->ARR11(3)                    <---------AHL20(2)              <---------AHL20(1)                    --------->AHL20(2)              --------->AHL20(1)                    <---------AHL20(1)              <---------ARR11(3)         <---------ICU4             <---------AHL20(2)          --------->YAB1               <---------WOX13(1)       <---------ANAC55(2)              --------->ICU4 <---------AHL20(2)  <---------------AGL15       <---------ANAC58               --------->WOX13(1)             <-------GAMYB       ----------->GT1------>ZmHOX2a(1) <---------ATHB51            <---------MYB46(3)       <---------ANAC46  <---------TOE2(3)         --------->ICU4  <---------AtMYB61       <---------ANAC58  <---------YAB1 <---------ATHB12 <-----------GT1   --------------->AGL15----- ==========================================================================================MADS_MADS -AHL20(2)  --------->ICU4--------->ATHB12    ----------->GT1    --------->ALFIN1 ----------->GT1   aaatttgtttcgtaaatatttttccttaagattggactaccaattatgaagtaatattttaactaatgtgtggttgacaaaatatagaaaaaatcaagaa  10925300                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                             --------->AHL20(1)                                                                             <---------AHL20(1)                                                                          <---------AHL20(2)                                                                  ------->GAMYB                                                               <---------DOF5.7(2)      <-------MYC3                                             --------->MYB52(1)      ------->MYC3                                            <---------WRKY45<---------AHL20(2)   <---------ALFIN1                                   --------->AHL20(2)  --------->AHL20(2)   ------->GAMYB                                     <---------YAB1      <---------AHL20(2)  --------->MYB46(3)                              <---------YAB1 --------->ANAC46 -------->P ----------->GT1                       <---------AHL20(2)     --------->AHL20(2) ------>MYB83      <---------AHL20(2)            <---------AHL20(2)    --------->TOE2(3) ------>MYB46(1)   --------->AHL20(2)          <---------YAB1 <---------WRKY38(1) ---->GLK1(2)     --------->AHL20(2)       --------->ANAC55(2)<---------WRKY12--------->AHL20(2)   tccaaccacatgttgagaaaaaaaatttctacttcaaatacacttacttatttttattatttagtcaacgaaatattaatttatttatggacatattttt  10925400                                                                           <---------AHL20(2)                                                                        --------->ARR11(3)                                                                        --------->AHL20(2)                                                                        <---------ARR11(3)              <---------AHL20(2)                                        --------->AHL20(1)             --------->AHL20(2)                                         <---------AHL20(2)             <---------AHL20(1)                                --------->ZAT6<---------AHL20(2)             <---------AHL20(2)                          <---------------AtSPL8             --------->AHL20(1)    <---------YAB1        --------------->AtSPL8            --------->AHL20(2)   <---------ICU4          --------------->AtSPL3         --------->AHL20(2)      --------->ATHB12        <---------------AtSPL3         <---------AHL20(2)     --------->ICU4          ---------->DOF2 <---------AHL20(1)        --------->AHL20(2)      <---------YAB1    <---------AHL20(2)   --------->AHL20(2)           <     --------->TOE2(3)         --------->TOE2(3)<---------AHL20(2) --------->AHL20(2)      <---------   aaaaataccataaaattaatttttgttataaaacattattagtagtttatatttttttgaaagtaccactaaaatatattattttctgaaaataccacaa  10925500                                                                                                    -                                                                                                    -                                                                                            ---------                                      --------->AHL20(2)                                    ---------                            ------>ZmHOX2a(1)                                           --------->AHL20(2)                           --------->TOE2(3)                                            <---------AHL20(2)                        --------->ARR14(2)                                              <---------AHL20(1)        <---------TOE2(3) ------>ZmHOX2a(2)                                             --------->AHL20(1)        <---------TOE1(3)<------ZmHOX2a(2)                     --------->TOE2(3)    --------->AHL20(2)   <----------DOF2      --------->ARR11(3)        ---------->DOF2                   <---------AHL20(2) -----------GT1         <---------ARR11(3)     --------->TOE2(3)                   --------->AHL20(2) -ID1  ---------->DOF2  <---------ARR14(2)     --------->TOE1(3)               <---------ATHB12 <----   aattacttttaaagttttcaaaactagatcctaaactctaaaaaataaaccctaaaccccaaaaaacttaactcaaacccaaacatttaataaattataa  10925600                                                           <---------AHL20(2)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                  <---------AHL20(1)                                                  --------->AHL20(1)                                       *TSS       --------->AHL20(2)                            -----                                       <---------ARR14(2)  --------->AHL20(2)              ---------- -------->TOE1(3)                     <---------CCA1(2)   <---------AHL20(2)         --------->AHL20(2) -------->TOE2(3)                     <---------GLK1(1)--------->AHL20(2)            <---------AHL20(2) >AHL20(2)                          <---------ANAC58   <---------AHL20(2)        --------->AHL20(2) >YAB1      <----------DOF2         <---------ANAC58  <---------AHL20(2)   ---------->DOF2--------->AHL20(2) -------GT1 <---------DAG2     <---------AHL20(2) <---------AHL20(2)<---------WOX13(1)--------->AHL20(2)   acccttaaaatcaactttttgtgtttcaagtattttttgggtatctctctaatttatttatttatttcagattgctcaaaagaataaataaataaaagaa  10925700                                                                     <------ZmHOX2a(2)                                                                    <---------ARR14(2)                                                          <------MYB83                                                          <------MYB46(1)                                                          <---------MYB46(3)                                                         <---------AtMYB61                       <---------ARR14(2)             --------->ALFIN1------>ZmHOX2a(2)                       <---------GLK1(2)              <-----------RAV1(1)   <----------DOF2                       --------->ARR14(2)       <-------TEIL        --------->ARR11(3)                   <---------LBD16             --------->ARR14(1)   --------->ARR14(2)              <---------ANAC58                --------->ARR11(1)    <-----------ARR10              <---------ANAC58                <---------GLK1(2)     <---------ARR14(3)              --------------->AGL15           --------->ARR14(2)    <---------ARR11(3) ---->GLK1(2)<-----------------AGL1           <---------ARR14(2)    <---------AGP1                  - >DOF2       ----------------->AGL1         ----------->ARR10       --------->ARR14(3)              -   tttggctgtctcatttccttgttcggaatcggagaagaaggaagactagattcgatgtgttggtgaagaagatctcgactttgttcaaaattccaatttc  10925800                                                                         --------->LBD16                                                                       <---------HSFB2a(2)                                                                       <---------LBD16                                                                       --------->HSFB2a(2)                                                                <-------GAMYB--------->ARR11(1)                                                                --------->At5g28300                                                               ----------->GT1     <---------ANAC46                                                            --------->CCA1(2)--------->ARR11(3)                                                           --------->ARR14(2)<---------ARR14(2)             --------->KAN4(2)                             <---------ARR14(2)--------->ARR14(2)           <------ZmHOX2a(2)                               --------->ARR11(1)<---------ARR11(3)           <---------YAB1                                <---------MYB46(3)----------->ARR10      <--          --------->ARR11(3)                            <---------ANAC46--------->LBD16           ---          <---------ARR11(3)                --------->ATHB12--------->ARR14(1)--------->CCA1(2)   <--         --------->YAB1                   <---------WOX13(1)------------>MYB.PH3(1)<---------ANAC58      ---------->DOF2           <----------DOF2 <---------AHL20(2) --------->KAN4(2)  --------->ATHB12 -------->ANAC58           --------->HSFB2a(2) <---------AHL20(2) <----------TaMYB80<----------DOF2 -------->ANAC58           <---------HSFB2a(2) --------->AHL20(2)<---------MYB52(1)<---------ANAC58   gctcgcctcaaagatcattctctcatcttctcgactttgatgcgattgattaaatatggtggatacggttattcccggagatatggcttgtttggatgca  10925900                                                                                                    -                                                                                                   --                                                                                             <-------                                                                                             --------                                                                                             --------              --------->LBD16                                                                <-------            <-----------RAV1(2)                                                             <--------        <---------At4g35610                                                               --------->LBD16        --------->At4g35610                                    <---------ARR11(3)        --------->LBD16 <-----------RAV1(1)                                        <---------GLK1(2)            --------->ANAC46 <---------MYB46(3)                                        <---------At4g35610          <---------HSFB2a(2) =======================RAV<----------DOF2               --------->YAB1        <----------DOF2    --- -------GLK1(2)<------ZmHOX2a(1)                  <---------ARR14(2)          <---------ANAC58    <-- ------>ARR14(2)    --------->ARR11(3)            --------->ARR14(2)          <---------ANAC58  ----- -------ARR14(2)    <---------ARR11(3)        <---------LBD16  --------->ARR11(3)       --------->HSFB2a(2)   gatttgttgcagcttcaggaaatgtcttcctttgttctcaattctaaacctggattcactcagaagctcttcgaccagtggctttctcttcccgaagctc  10926000                                                                           --------->ANAC55(2)                                                                           <---------ANAC58                                                                           --------->YAB1                                                                        <----------DOF2  <-----------RAV1(2)                                             --------->HSFB2a(1) ---------->RAV1(1)                                              --------->ARR14(2) --------->HVH21                                                 <---------ARR14(2) --At4g35610                                                     <-----------ARR10 ->At4g35610                                                     ------->TEIL                      <- ->ZAT2                                                   --------->MYB52(2)    ----------->GT1    <- --ZAT2                <---------YAB1        <---------ANAC58    --------->GLK1(2)                <-- ---ARR10    <----------DOF2                 <---------ANAC58    <---------ARR11(1)      --------->YAB1 ------>At4g35610 <-----------GT1           <---------At4g35610 <---------CCA1(2)       <---------YAB1 -------At4g35610 --------->ZAT6 --------->YAB1         <---------MYB52(1) <---------ANAC58      <--- ----->CDC5  <---------DAG2  --------->ZAT6 --------->At4g35610 <---------ARR14(1)      <---------ATHB12   agcgacaggtttctgctttttcactattcttacactcatgcttcttagcttactctctgttagttcgaatctttctttcgtaatgttacaatgatacttc  10926100  Previous    Next  AGI:  At5g28900.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative [Arabidopsis thaliana] (TAIR:AT5G44090.1); similar to calcium-binding EF-hand family protein [Arabidopsis thaliana] (TAIR:AT1G54450.1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to putative protein phosphatase 2A regulatory subunit [Oryza sativa (japonica cultivar-group)] (GB:AAK13162.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40604.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65086.1) Range:  from: 10925639    to: 10930342    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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