Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ATHB12                               <---------YAB1                            ----------->HVH21                          <---------O2        --------->AtMYB61 --------->O2                            --------->ZAT14        <---------ALFIN1  --------->ANAC55(2)                --------->ZAT18       --------->MYB46(3) <---------TGA1a                    --------->ZAT14    ----------->HVH21     --------->TGA1a                    <---------ZAT14                 <-------  <---------TGA1a         ===================================bZIP_DOF                   <------ZmHOX2a(2)  --------->O2     <---------ZAT14                   <---------ZAT2                    --------->AGP1  --------->TGA1a  --------->ZAT14                   --------->ZAT2                ----------------->AGL1  <---------O2     <---------ZAT18                ---------->DOF2<-----------RAV1(1)  --------->At4g35610   tgactcgtgaccacctctcagtgttctcacttgacgattggaaacacaatcccaaagctggacttcactgttgtcaagaccaattgccagatcaagacca  9735700                             <---------ALFIN1               <---------ANAC58                                                      --------->ANAC58       ----------->GT1    --------->PCF2           --------->ANAC58          ------->TEIL  <---------ANAC58       <-----------HVH21   <-----------HVH21            --------->ANAC46  <---------ANAC58 ----------->HVH21        --------->YAB1                --------->ANAC58  <---------ANAC46<-----------HVH21    <---------YAB1             --------->MYB46(3) --------->ANAC58 --ARR11(3)    <---------ANAC58  ------>ZmHOX2a(1) --------->ANAC58       --------->ANAC58   tcttgcgtccagttaatacttgtgacaggtccctcctcttcatcaatggtcacaagcttatatgtagaaccactagacgcatcccacaagtaaacagtgt  9735800                                                                          <-------TEIL                                                                        ------->PIF5                                                                        <-------PIF5                                                              --------->LBD16                                                             --------->ANAC58                                                             --------->ANAC58                                                             --------->ANAC46                                                            <---------LBD16    --------->ANAC58                           <---------TOE1(3)     <-----------RAV1(2)            <    --------->ANAC58                           <---------TOE2(3) --------->GLK1(1)            <------  ---------->DOF2               <---------ALFIN1           --------->At4g35610                -------   ctcccaaagcaatggctaagacattagaactgccccaatccaacaagttaaggtagaagtcatccgcaattccaggtgcatccaagactctctcactatt  9735900                                      <------MYB46(1)                                      <---------MYB46(3)                                   <-------GAMYB                                  --------->MYB55(2)                                  --------->MYB111(2)                                  <---------MYB46(3)                              <---------TOE2(3)                          --------->ARR14(2)                  <---------HSFB2a(2)                       <---------TOE2(3)         <------ZmHOX2a(2)                                  -        ------->TEIL   <---------ANAC46         --------->ARR14(2)                                  <       <---------CCA1(2)  <---------ARR14(2)    <---------ARR14(2)                       --------->HSFB2a(2)  <------ZmHOX2a(1)   <---------LBD16 <------MYB83        --------->ICU4      <---------TOE2(3)     - ---------TOE2(3)    --------->MYB52(1)        <------ZmHOX2a(1) ---------->DOF2         <---------HSFB2a(2) ---ZAT14          <----------DOF2--------->MYB111(1)   --------->ATHB12   <----------DOF2 ---------- -->ZAT14 --------->TOE1(2)--------->CCA1(2)<------ZmHOX2a(1) --------->HSFB2a(2)  --------->MYB52(2)   ctgaggaatgtatctacgaggctttacggatataggttgttggtgaggaggatcagagtgattactagaaagcagagctttaggtttgtttctgaaagcg  9736000               <---------YAB1                     <----------DOF2                             <------            <---------ARR14(2)             <---------REM1(1)                                  <------            --------->GLK1(2)          <-----------TGA1                             <---------ANAC55(2)            --------->ARR14(2)         <-----------HVH21                            <---------ANAC55(1)        --------->ZAT18               <---------ANAC58              <-----------GT1 --------->ANAC55(2) -------->ARR14(2)                    <---------ANAC58<---------ANAC58              <---------ANAC46 ---------ARR14(2)  --------->YAB1    --------->ANAC55(2)   <---------At4g35610     <---------ANAC58 -------->GLK1(2)  <-------TEIL       <---------ANAC46<---------ANAC58 --------->TOE2(3)      <------ >DOF2  <---------ZAT18               <---------ANAC55(2)   --------->At4g35610     <---------ANAC58   agaatccgagtgcgattctgattcatagcctcagccaattgcgtcatgtaggcttttcttgatgctgaagttacctcatcgacattacgttttcttcctt  9736100                                                   ------->TEIL                                     <------ZmHOX2a(2)                                    --------->ARR14(2)             <---------ANAC46              <--- ---ANAC58              --------->GLK1(1)          --------->GLK1(2)            ----------->HVH21---- ---ANAC58              <---------GLK1(1)  --------->MYB59         <---------ANAC58          -------- ---ANAC46      ---------->DOF2     <---------ARR14(2)             <---------ANAC58     ---------->DOF2   gggtaagagcgtagttagcaaagtcgaaatccatggccgatctattcggtatgaatctgtcgaagttttccttggaaagtttccgacggagaaagtgttc  9736200              <---------ANAC58              <---------ANAC58             <---------HSFC1(2)             --------->HSFC1(2)            ------->TEIL         --------->ANAC46                                                              <----------ID1         --------->ANAC58                                                          ---------->DOF2    --------->ZAT18                            <---------YAB1                  <----------ID1    <---------ZAT18                          --------->YAB1             --------->ANAC46 ------HSFB2a(2)        --------->AHL20(2)   <---------ICU4             --------->ANAC58 ----->HSFB2a(2)      <----------DOF2       <---------YAB1              --------->ANAC58            - ->ZAT18 --------->ANAC58             <---------ZAT6 <---------YAB1   --------->MYB52(1)            -   tacaagtggacacgaagcttgtgcctttaaatgtgaagaagtgttcatcataactgtgattagaagaagactaaacgaaatatgacaaagagacaaataa  9736300                             ---------->DOF2                           <-------TEIL               --------->ANAC58               --------->ANAC58                                                                  <---               <---------ANAC55(2)                                                              <----               ----------->GT1                                                        <---------TOE1(3)              <-----------------------TaNAC69(2)                                      <---------TOE2(3) -------->TOE2(2)  --------->DAG2                                      <------------CBF         <---- -------->TOE1(2) ---------->DOF2                         <---------ARR14(2) ------------>CBF <------   aacctgcgaagaaggaaacgtaaagtagattcaaagcagagagacagagagcgaatagcgaatagtgaaggaagattgtggcaattttagggttttttgc  9736400                                             <---------ARR11(3)                                           ----------->ARR10                                  --------->SPL7                               <---------GLK1(1)                                  <-------TEIL                                 --------->GLK1(1)                               <---------ANAC58                               <---------GLK1(2)        <---------ICU4         <---------ANAC55(2)                   ------>ZmHOX2a(2)       <---------AHL20(2)      --------->ANAC55(2)                   <---------MYB59         --------   <---------AHL20(2)          <---------ANAC46                     <------ZmHOX2a(2)       ---------   --------->AHL20(2)          <---------ANAC55(1)                 --------->ARR14(2)       <-------- <----------DOF2               <---------ANAC58   ----------->GT1  <---------AGP1         --------->YAB1 --------->TOE2(3)            <-----------------------TaNAC69(2)   <---------ARR14(2)<---------MYB52(1) -------DOF2              --------->WOX13(1) --------->ARR11(3)    <-----------ARR10--------->LBD16 -----ANAC58            ------------>CBF <---------MYB52(1)       <---------CCA1(2)----------->GT1 -----ANAC58          ----------->GT1  <---------MYB46(3)         <---------ARR14(1)<-------GAMYB --- -----GT1           <------------CBF--------->MYB52(1)       <---------GLK1(1)--------->ARR14(2) ----   tttctttaattcattacatagaaattgtcaattacgtacaacggttagatattagtaaaatggaaatcggatctaattcagatttccgttaaaaataaat  9736500      <---------YAB1     <-----------GT1  --------->ARR11(3)  <---------GLK1(2)  <---------ARR11(3)                        --------->GLK1(1) ->AHL20(2)                                 <---------GLK1(1)    ----------->TBP >AHL20(2)                        <---------AHL20(2)         --------->AHL20(2) -AHL20(2)                        --------->AHL20(2)  <-----------GT1   --------->TOE2(3)   <-------- ------->DOF2                    <-----------------AGL3      ------------>CBF  ------------>CBF   <-- ----->AHL20(2)               --------->AHL20(2)    --------->AHL20(2)  --------->TOE1(3)   <--------   aaaagattttcattacagttactgaagaaaaatgaaataaatatggaaatcgaatttaacaaattcaatataaaccctaatcccaattctctgactttat  9736600  Previous    Next  AGI:  At5g27570.1    Description:  WD-40 repeat family protein. similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G27080.1); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G26900.1); similar to CDC20.1, signal transducer [Arabidopsis thaliana] (TAIR:AT4G33270.1); similar to hypothetical protein [Brassica napus] (GB:CAA11819.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain Cdc20/Fizzy (InterPro:IPR000002) Range:  from: 9734899    to: 9736134    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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