Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->AHL20(2)                   --------->AHL20(2)                   <---------AHL20(2)                 --------->AHL20(2)                 <---------AHL20(2)               --------->AHL20(2)               <---------AHL20(2)             <---------AHL20(2)             --------->AHL20(2)                                                           --------->YAB1           <---------AHL20(2)                    --------->AHL20(2)                      --------->ICU4           --------->AHL20(2)           <---------ARR11(3)                               <---------YAB1         <---------AHL20(2)             --------->ARR11(3)                             <---------ICU4         --------->AHL20(2)           ------->TEIL<---------AHL20(2)                  <---------ATHB12       --------->AHL20(2)          ----------->GT1--------->AHL20(2)                  --------->ICU4       <---------AHL20(2)     ------>ZmHOX2a(1)  <---------AHL20(1)            ----------->GT1<------     --------->AHL20(2)      --------->TOE2(3)--------->YAB1                ---------->DOF2  --------     <---------AHL20(2)     ----------------->AG <---------AHL20(2)      --------->YAB1--------->YAB1   --------->AHL20(2)<---------AHL20(2)<---------CCA1(2)        --------->YAB1<---------TOE2(3)   ttcatatatatatatatatatatatatatatcctaaaatgtatatctctaataaaattagaagaaatgataccaaaaataaaggtgaaatcatgataaaa  9553000                                                                                                 <---                                                                                                <----                                                                                             <-------                                                                                          <---------AHL20(2)                                                                   --------->ANAC46    --------->ARR11(3)                                                             <---------ANAC46          <---------ICU4                                                             <---------ANAC58          <---------ARR11(3)                                                   <---------YAB1 <---------REM1(2)    --------->AHL20(1)                                         <----------DOF2     <---------ANAC58        <---------AHL20(2)                                         <---------DAG2 --------->AHL20(2)           <---------AHL20(1)  ---------->ID1                     <---------TOE2(3)  <---------ICU4              --------->YAB1 ---AHL20(2)        --------->ATHB12<---------DOF5.7(2)--------->AHL20(2)         --------->AHL20(2) ->AHL20(2)        <-------TEIL   --------->DOF5.7(2)  <---------AHL20(2) <-------TEIL <---------AHL20(1)   ttttgtttttttttgttttggttcattgagtttgccattaacgctttttttttataaataatttcgtctacacaaattcatccatataatattttctttt  9553100                                                                                              -------                                                                                              -------                                                                                   --------->AHL20(2)                                                                     <---------HSFC1(2)      --------                                                                     --------->HSFB2a(1)     <-------                        <---------TOE2(3)                            --------->HSFC1(2)  --------->MYB52(1)   <---------At4g35610  --------->MYB59       --------->DAG2         <---------HSFB2a(1) ------------ ------At5g28300        <---------TOE1(3)    ---------->DOF2     ----------->GT1  --------->AHL20(2) -------GT1         ------->TEIL     ------->TEIL    --------->At4g35610          <---------AHL20(2) ---DOF2    <-----------GT1       <---------YAB1     <---------At4g35610      --------->AHL20(2)   actgcatcagagtttcactatgtatttaggttttttatgaattttaaaaaagttcagcatcaaggtgaagaaaattccaaaaaaataaataaaacggtga  9553200                                                                     --------->ZAT14                                                                     <---------ZAT14                                                          <---------YAB1                                                        --------->YAB1 ---->HVH21                                             <---------ICU4 -->WRKY38(1)                                          <---------ATHB12   <-----------RAV1(2) ->At5g28300                                      >>>>>>>>>GATA-1    <---------ZAT18 ----HVH21                  --------->DAG2      ----------->GT1--------->TOE2(3) <-----------GT1 >MYB.PH3(1)---------->ID1 ---------->DOF2 --------->AHL20(2)------->TEIL<---------MYB52(1)   cccaaaaaaaacttgttgtcttcaaaaccaaaagtactcgacaaatcaaatagataaatcatgaatcttagtacagtcaggttttatcgtctacgataag  9553300                                ------>ZmHOX2a(2)                               --------->GLK1(1)                               <---------GLK1(1)                               <------ZmHOX2a(2)                              <---------ARR11(3)                              --------->ARR11(3)                              <---------ARR14(2)                              --------->AGP1                              --------->ARR14(2)                              <---------AGP1 --------->TOE2(3)                             <---------At4g35610     --------->MYB52(1)                    --------->MYB52(1)                   <---------ZAT14           <----------DOF2 ----------->TBP               ----------                   --------->ZAT14           --------->TOE1(3)--------->AHL20(2)          --------->ANAC46                 --------->ANAC46      ----------->GT1 --------->MYB46(3)      <----------DOF2-------               --------->ZAT6<---------CCA1(2) --------->AHL20(2)  --------->ANAC46     --------->ANAC46   ttccacaataaatccaaacactaaactgttcagatctcagatagtaactttaaatcaacggctataaattcgccatttgtactttcatttacacaacaga  9553400                                                                       <---------HSFB2a(1)                                                                       --------->HSFB2a(1)                                         *TSS                          <---------HSFC1(2)                                         <-----------GT1               --------->HSFC1(2)          -- --------->YAB1              --------->ANAC46                        <---------GLK1(2)            === ->RAV1(1) --------->ANAC46  --------->YAB1          ================================================ >GAMYB <-------TEIL     ------>ZmHOX2a(1)           --------------->AGL15                        <--   gaataatacatacactctatctctctcctattcgtaacttatatttctctctctactgtgtttagaaattggaatcttctctcttctctatctccctctc  9553500                 --------->ANAC58                 --------->O2                 --------->ANAC58                 <---------TGA1a                 --------->TGA1a                 <---------O2                 --------->ANAC46                 --------->ANAC55(2)                                                <----------DOF2                 --------->ANAC55(1)                                                <---------DAG2               <---------ALFIN1                                               <-----------GT1              <---------REM1(2)                                          <---------MYB52(1)            <---------SPL7                                      ------>ZmHOX2a(1)---------->ID1          --------------->AtSPL3                <---------HSFC1(2)      --------->LBD16    --------->DAG2                ----------->GT1              --------->TOE2(3)<-----------GT1   ---------->DOF2               --------->HSFB2a(2)<---------ANAC58   ----------->GT1   ========================bZIP_DOF             --------->HSFC1(2)     --------->ANAC58 ------------->AGL15             <---------HSFB2a(2)<---------ANAC58   --------->ANAC58 ==========================================MADS_MADS<---------ANAC46   <---------ANAC55(2) ===============MADS_MADS  <---------------AGL15<---------HSFB2a(1)    --------->ANAC55(2)       ---- ---------------AGL3       --------------->AGL15--------->HSFB2a(1)   <---------LBD16     <----------   tcttaaaaagggaccgtacacgtctctctctatttccagtaaaaaatcgaaatttcgtataatttcctcagtcccgtaattttctccttttttttcttcc  9553600                                                                                   <---------HSFB2a(1)                                                                                   --------->ZAT2                                                                  <---------TOE2(2)<---------At4g35610                                                                  <---------TOE1(2)--------->At4g35610                                        --------->TOE1(1)    --------->GLK1(2)     --------->HSFB2a(1)                                 <---------ANAC58            <-----------ARR10     --------->HSFC1(2)                                 <---------ANAC58           <---------GLK1(2)      <---------HSFC1(2)                              <---------MYB52(1)   >>>>>>>>>TBF1 <-----------RAV1(2) ----->LBD16     <---------ARR14(2)    ------>ZmHOX2a(1) >>>>>>>>>TBF1      <----------DOF2 -GT1            --------->ARR14(2)   <---------ANAC46>>>>>>>>>TBF1     <-----------GT1 --------->HSFB2a(2)   ccaattccttcaattttcgaattcgcctctctgtttcgttcctcgtagacgaagaagaagaagaatctcaggttttagctttcgaagcttccaaaatttt  9553700                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                                <----                                                                                      --------->ARR14(2)                                                                                      --------->AGP1                                                                                      --------->ARR11(3)                                                                                --------->At4g35610                  <----------DOF2                   <---------HSFB2a(2)         <---------At4g35610                <----------DOF2        <---------CCA1(1)               --------->ANAC58 --------->MYB46(3)           --------->HSFB2a(2)         <---------RVE1(1)               --------->ANAC58<------ZmHOX2a(2)         ----------->RAV1(2)          --------->ARR11(3)              --------->DAG2  <---------ARR14(2)       ------>ZmHOX2a(2)              <---------ARR11(3)             ---------->DOF2 --------->At4g35610     <---------ARR11(3)               <---------ARR14(2)         <---------TOE1(3)  ----------->ARR10     --------->ARR11(3)  --------->WOX13(1) <---------TOE2(3)    <---------TOE2(3)<------ZmHOX2a(2)   gaattttgatcttctgggctcttttgtaaatcagactgaagatatttagattacccagaagttgttcaaggtaaagcaattcagatcagatccaccaatt  9553800                                                  <---------CCA1(1)                                        <---------MYB46(3)                                      <-------GAMYB                                     --------->MYB52(2)                                     <-----------RAV1(1)                           ------>MYB46(1)                                     <---------MYB46(3)                          <---------MYB59 ------AHL20(2)                    <---------ANAC46      <---------GLK1(1)   <---------ETT(1) -----AHL20(2)                 <-------GAMYB      <---------RVE1(1)    <---------TOE2(3) ---->AHL20(2)                --------->MYB52(2) <---------ARR11(3)   ---------->DOF2 -----AHL20(1)                <---------MYB46(3) --------->ARR11(3) <---------YAB1 ------>MYB83   ttttttttttttttcatttgaagtttttgtgtttgttgtttgttgttgggagatatttgaaatctgggttattaaagttccgacctaatttcatattgtg  9553900  Previous    Next  AGI:  At5g27150.1    Description:  NHX1 (NA+/H+ EXCHANGER); sodium ion transmembrane transporter/ sodium:hydrogen antiporter. Identical to Sodium/hydrogen exchanger 1 (NHX1) [Arabidopsis Thaliana] (GB:Q68KI4;GB:O04655;GB:Q8LRL1;GB:Q9ZPK3); similar to NHX2 (sodium proton exchanger 2), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G05030.1); similar to sodium proton exchanger [Thellungiella halophila] (GB:ABF48496.1); similar to Na+/H+ antiporter [Thellungiella halophila] (GB:ABJ97691.1); similar to Na+/H+ vacuolar antiporter [Brassica napus] (GB:AAO38856.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153); contains InterPro domain Sodium/h Range:  from: 9553441    to: 9557516    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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