Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>MYB83                --------->ANAC46                --------->O2                --------->ANAC55(2)                <---------ANAC55(2)                --------->ANAC58                ===============================MYC_MYB                --------->ANAC58                --------->ANAC55(1)        <---------ARR14(2)    --------->HSFB2a(2) ------>MYB46(1)    <---------HSFB2a(2)----------->RAV1(1)                       ------>NtERF2   ----------------------->TaNAC69(2)                         --------->At4g35610 ---------GLK1(2) --------->DOF5.7(2)                         <---------At4g35610 ----->YAB1     --------->bZIP60(2)                           <---------LBD16 ----->AHL20(2) --------->TGA1a                           <-----------RAV1(1)                  <----- -----ATHB12    <---------O2                            --------->GLK1(1)                ---------->DOF2 >MYB83 --------->ARR14(2)             ------->GAMYB   --------->ARR14(2)               --------->AHL20(2) >MYB46(1)      <---------TGA1a     --------->MYB52(1) <---------ARR14(2) --------->ANAC58   <------- -->WOX13(1)  <---------ALFIN1<---------REM1(1)      --------->LBD16      --------->ANAC58   --------   caaattctcgaattcgacacgttaccaacaaaatgtagcaacgggaacaaaaacccagaaatgctgcggactgtttacgcacaaaatcgattaaagacct  9470000                   <------ZmHOX2a(2)                   --------->CCA1(2)                  --------->AGP1                  <---------AGP1                  --------->ARR14(3)                  <---------ARR14(3)                  --------->ARR11(3)                  <---------ARR11(3)                  <-----------ARR10                  <---------ARR14(2)       <---------STY1(1)             --------->LBD16               --------->STY1(1)      <---------ANAC58       ---------->DOF2      <---------ANAC58     --------->HSFB2a(2)    <---------ANAC46------>ZmHOX2a(2)   --------->ZAT6 <----------DOF2  --------->ARR14(2)  ----------->RAV1(1)  <---------ANAC58 ----MYB59  <---------HSFB2a(2)    --------->ANAC58        <---------ANAC58 --ARR11(3) --------->HSFB2a(2)    --------->ANAC58  --------->ALFIN1------>ZmHOX2a(1) ->ARR11(3)<---------LBD16 <---------HSFB2a(2)      --------->ALFIN1--------->TOE2(3)   aaactttcgcgttcccagaagatctagccctagaagcgagcaacactaggggaagggggggtcttgtgttcctcaaacagacaacaattgagaattggaa  9470100                                                                                                   --                                                              ==================================HOX2a_HOX2a                                                              <------ZmHOX2a(2)                   ---        ----------->GT1                                 <-----------HVH21----------->GT1 <------ZmHOX2a(1)       ----------->GT1           ---------->DOF2   --------->CCA1(2)---------->DOF2     <----------ID1      --------->DAG2  --------->AHL20(2)  --------->GLK1(2) --------->At4g35610    ---------->DOF2<--    ---------->DOF2  <---------ATHB12    <---------GLK1(2)  <---------At4g35610  --------->YAB1   <--   tcgatgaaaaggttaaaacaccaatgaattaagaagaaagagagattcttgagaaatgggtcagatcagagaaagaggttaaatcaaaagaggacgaagt  9470200                             <---------ARR14(2)                      --------->ARR14(2)                      <---------ARR14(2)                --------->CCA1(2)            --------------->AGL15            <---------------AGL15           <-----------------AGL1                                         --------->ARR11(3)           <-----------------AGL2                                   <---------ZAT2           <-----------------AGL3                                   <---------At4g35610           <-----------------AG                                     --------->At4g35610    <---------At4g35610      --------->ARR14(2)                     --------->ZAT2 --------->GT1 <---------GLK1(2)                                   ----------->RAV1(1) ------>MYB59  --------->ARR14(2)                                --------->At4g35610                - -------TOE1(3)--------->ARR11(1)       <---------TOE2(3)    --------->YAB1------------------------>ANAC81 -------TOE2(3)<---------ARR14(2)       --------->MYB59 ----------------->AGL2      -----------------   aaggttagatgatactagatttgggatttgggatttgggatttaggtagagaagacagaccaatagtagcagcagagaacttgaaaaactaaaaaaaaaa  9470300                               --------->TGA1a                               <---------TGA1a                               --------->O2                               <---------bZIP60(1)                     >>>>>>>>>GATA-1                     >>>>>>>>>GATA-3                     >>>>>>>>>GATA-4          <---------ZAT14      <---------ANAC46                                                    --          --------->ZAT14      <---------O2                                                        --     <---------ARR14(2)     ----------->TGA1                                                       --     --------->ARR14(2)     ----------->HVH21                                               ---------     <---------GLK1(2)<---------WOX13(1)                                                    <-------- -------->MYB52(1)   >>>>>>>>>GATA-2                                                      <---------TOE1(2) ------->ANAC81 --------->ALFIN1                         <------ZmHOX2a(1)            <-----------GT1   aaaaacagatacttcacagtgtggattgatgtgacgagagaagagaacgaagagtgagaggagagagagaaacagagtgttttgaattttcccagtttct  9470400                    <---------ICU4                    -------->ATHB1        --------->AtMYB61    <---------TOE2(3)      *TSS         <---------AHL20(2)     --------->AtMYB61     --------->AHL20(2)     <---------ALFIN1  <---------AHL20(2)     --------->DEAR3(1)--------->AHL20(2)    --------->MYB46(3)<---------YAB1              --------->AHL20(2)             <------MYB83  --------->ANAC46 --------->AHL20(1)             <---------AHL20(2)             <------MYB46(1)  <---------ALFIN1 --------->ICU4         <---------DAG2                        <---------TOE1(2)<--- ------->ANAC46    --------->AHL20(2)     <----------DOF2              <------------CBF          ---- ------->ANAC58    <---------YAB1     <-----------GT1          --------->HSFB2a(2)              <---- ------->ANAC58 --------->ICU4    <---------YAB1  <---------AHL20(1) --------->AHL20(2)       ------- >ARR14(2)    --------------->AGL15  <-----------GT1    <-----------RAV1(1)<---------ANAC46   ------- -GLK1(2)   ------>NtERF2  <---------AHL20(2) <---------AHL20(2)     <---------AHL20(2)----------->GT1   cactccaccacctctgccaaaattattaattaatgtattattccctttttattttattttgttgtctcgaattaattgtttgtaggtttcagtaaattat  9470500                      <---------------AGL15                      --------------->AGL15                     ----------------->AGL2                     ----------------->AGL3                                    --------->YAB1       <---------HSFB2a(2)                                                    <------ZmHOX2a(2)       --------->HSFB2a(2)                                                   <---------ARR11(3) ------AHL20(2)      ================================================================================ ----->AHL20(2)--------->YAB1              <---------AtLEC2                  --------->ARR11(3) -----YAB1    --------->AHL20(2)       --------->CCA1(2)             <---------TOE2(3)        ------- -->YAB1      <---------AHL20(2)--------->CCA1(2)                 <---------MYB52(1)      <---------ARR14(2) -->AHL20(2) --------->AHL20(2)--------->ARR11(1)            ------------>MYB.PH3(1)      --------->ARR14(2)   aaatttcttctgcaaattaataatccaaatatagatatgagatttgaatggccacgatggacaaaaccgttatggattagatcataaatcccaatccgta  9470600                                 ----------->GT1                               ---------->DOF2          --------->ATHB51                            <---------ANAC55(2)         <---------ICU4                            --------->ANAC55(2)         -------->ATHB1               --------------->AtSPL8                   --------->ATHB12        --------->ARR11(3)  --------->ANAC46           <---------ATHB51                   <---------At4g35610 --------------->AGL15      <---------ANAC46           --------->ICU4       <---------AHL20(2) ================MADS_MADS <---------TOE2(3)           <---------AHL20(2)  <---------AHL20(2)      <- -->LBD16<------ZmHOX2a(2)<-----------GT1              --------->AHL20(2)  --------->AHL20(2)      --   gtactatatagatcaagtatggaccattttacgtaaagaaaatttagtttatgccaaattattgtttgttttgaaaattaaatgatatactctgctaata  9470700                                                                                                   --                                                                                                 ----                                                                                               <-----                                                                      ------->TEIL             ------                                                                      <---------TOE1(2)        ------                                                                     <-----------GT1           ------                                                                  --------------->AtSPL8       <-----                                                                  <---------------AtSPL8       <-----                       <---------------AGL15                     --------------------->WRI1    ------                       --------------->AGL15                   --------->AHL20(2)             <------                      ----------------->AGL3                   <---------AHL20(2)             -------                    <---------ARR11(3)                         --------->AHL20(1)             -------             --------->ARR14(2)                                <---------AHL20(1)             <------             <---------ARR14(2)  <---------ZAT14              --------->AHL20(2)            ---------          <---------ANAC58       --------->ZAT14              <---------AHL20(2)           <---------AHL20(2)          <---------ANAC58   <---------TOE2(3)            --------->AHL20(1)           <---------AHL20(2)          <---------ANAC46  ---------->DOF2               <---------AHL20(2)           --------->AHL20(1)       <---------MYB52(1)  <---------AHL20(2)             --------->AHL20(2)           --------->AHL20(2) --------ZAT14      --------->ARR11(3)                    <---------AHL20(1)          --------->AHL20(2) ------->ZAT14     --------->GLK1(1) <---------ZAT6---------->DOF2<---------------AtSPL3   --------->AHL20(2)   gtatagtctgtttcgtatatgatatctatttaaagtatagtgtttttatgaaataaagaatttattaaattgtacgtttccaactcaaattaattaataa  9470800       <---------ATHB51       --------->AHL20(2)   <---------AHL20(2)       <---------AHL20(2) --------->AHL20(2)     --------->YAB1 --------->AHL20(2) --------->GT1      <---------AHL20(2) ----->ICU4      <---------AHL20(2) ---HAHB4       --------->AHL20(2)   --------->AHL20(2) --->YAB1   <---------AHL20(1)       <---------AHL20(2) --->ATHB51 --------->AHL20(2)      --------->AHL20(2) -->HAHB4   --------->AHL20(1)   --------->AHL20(2) ---ATHB1  --------->AHL20(2)--------->AHL20(1) ----ICU4  --------->YAB1 <---------AHL20(2) --->ATHB12<---------AHL20(2)<---------AHL20(1)                 <---------HSFB2a(2) ---YAB1--------->YAB1  <---------AHL20(2)               --------->AHL20(2) -->AHL20(2)<---------AHL20(2)  <---------AHL20(2)      --------->AHL20(2) -->ICU4<---------ICU4--------->AHL20(2)                <---------AHL20(2)       --------->ICU4 ---ATHB51<---------YAB1--------->AHL20(2)            --------->YAB1           <---------At4g35610 >YAB1 --------->ICU4 <---------AHL20(2)       ----------->GT1  --------->HSFB2a(2)       <----------   ttagtaaaaataattatattatatatatatatatattatttaatttgtaatgtgaaaaataattttctaaaacgttttttgagatgatggtttttcaacc  9470900  Previous    Next  AGI:  At5g26910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G58650.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05750.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05750.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO17458.1) Range:  from: 9465932    to: 9470406    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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