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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
                                                                                        ------------
                                                                                     --------->ANAC58
                                                                                     --------->ANAC58
                                                                                 --------->YAB1
                                                                                 -------->HAHB4
                                                                                <---------YAB1
                                                                                --------->ICU4
                                       <---------ANAC55(2)                    --------->YAB1
                                       <----------ID1                         <---------ICU4
                                       <---------YAB1                        --------->ICU4
         <---------ANAC55(2)--------->ZAT6     ---------->DOF2              --------->AHL20(1)
         ----------->GT1   --------->ZAT18 --------->DAG2                --------->AHL20(2)    -----
------->ZAT6               <---------ZAT18---------->DOF2   <-----------GT1--------->YAB1     ------
 
aacacttcaaataagtaaaaaacaatttagaacactaaaattacgaaaaggaaagtttttttttaacgggaacaaaaaaaataatgataagcccaaaaaa  9402100
                                           <---------ANAC46
                                           <------MYB46(1)
                                           <------MYB83   --------->ARR14(2)
                                          --------->MYB46(2)                            --------->AHL20(2)
        <---------AHL20(2)                --------->MYB111(1)                   ----------->GT1
       --------->AHL20(2)       ------>MYB46(1)           --------->GLK1(2) -------->HAHB4<---------YAB1
----->AGL3            --------->TOE2(3)   --------->MYB111(2)          <---------AHL20(2)--------->AHL20(2)
---->DAG2           <---------ATHB12      --------->MYB59 <---------ARR14(2)--------->ATHB12  <-----
---->DOF2 ---------->DOF2       ------>MYB83             <---------GLK1(2) --------->ICU4<---------AHL20(2)
 
agttgcaaaatttaaaagacccaaacattaaaaccaaattagagtttggtagagaagagagaatctgtcgattttaaaatgatgggttaaattaaaattc  9402200
                                                                --------->MYB52(1)
                                                                ------->TEIL
                                                              <---------SPL7
          ------>ZmHOX2a(2)                                  --------->ANAC55(2)
         <------ZmHOX2a(2)                                   <---------ANAC58
         --------->CCA1(2)                                   <---------ANAC55(2)
        <---------ARR14(2)                                   <---------ANAC58
        <---------ARR11(3)                            <----------DOF2
        <-----------ARR10                            ------>ZmHOX2a(2)
        --------->ARR11(3)                          <------ZmHOX2a(2)                     <------ZmHOX2a(2)
        --------->ARR14(2)                          <---------RVE1(1)             <---------ARR11(3)
        <---------AGP1                             --------->AGP1--------->DEAR3(2)      --------->AGP1
        --------->AGP1                             <---------ARR11(3)            --------->RVE1(1)
       <---------CCA1(2)                           --------->ARR11(3)       --------->TOE2(3)
    <---------At4g35610                           --------->GLK1(1)        <---------ANAC55(2)
<---------REM1(1)                        ---------->DOF2    <---------------AtSPL3--------->ARR11(3)
--TEIL----------->ARR10           >>>>>>>>>NAM    <---------GLK1(1)        ----------->GT1==========
 
atggtgaagcagatctgaagctaaaacccagaagaagggatgaagaaagagagagatctttaagacgtaccgatgaaaacgtaaaaatctcagatcgatg  9402300
                                         <---------TOE2(3)
                                  --------->SPL7
                                 <---------SPL1(1)
                                <---------SPL7
                                <---------SPL1(2)
                               <---------ANAC58
                              --------------->AtSPL3
                              ====================HOX2a_HOX2a
                              <-------TEIL   <---------GLK1(1)
                              ------>ZmHOX2a(2)
                            <---------ARR14(2)
                            --------->AGP1--------->ICU4
                            --------->ARR11(3)
                            <---------ARR11(3)
                           --------->GLK1(1)--------->ARR14(2)
                ---------->DOF2<---------ANAC58                                              <------
           --------->ARR11(3)=====================HOX2a_HOX2a                              <--------
           <---------ARR11(3)<------ZmHOX2a(2)                                            <---------YAB1
          ==========================HOX2a_HOX2a                              <---------GLK1(1)
          <------ZmHOX2a(1)<---------GLK1(1)<---------ARR14(2)              --------->ARR14(2)     -
          ===========================HOX2a_HOX2a                            <---------ARR14(2)  <---
        <---------TOE2(3) ----------->ARR10<------ZmHOX2a(1)           ---------->DOF2    --------->ICU4
=================HOX2a_HOX2a--------->ARR14(2)           <-----------GT1   <------ZmHOX2a(1) -------
 
aagagaagaattaggatattaaagagagagagatccgtacgagtaaggatttgtgggttttaacaaaaaaaaaaaaaaggatttgtgggtttgatgatta  9402400
                                                   <---------AHL20(1)
                                    --------->CCA1(2)              <---------AHL20(2)
                           <---------LBD16         --------->AHL20(1)
                         <-----------GT1           <---------ARR11(3)
---YAB1             <---------AHL20(2)     <---------ICU4        <---------AHL20(2)             ----
-ICU4               --------->AHL20(2)     --------->YAB1  <----------DOF2                --------->At4g35610
------>TEIL        <---------AHL20(2)     --------->ICU4<-----------GT1                 --------->YAB1
------YAB1    <---------DAG2  <-----------HVH21    --------->ARR11(3)         *TSS   --------->YAB1
-->ICU4       <----------DOF2--------->LBD16 <---------YAB1<---------DAG2<---------YAB1 <---------ICU4
 
tgaatctctctctctaactttatttatttttccggtgagagacgaattatgaaatatttttactttatattattttgtgattcgtctataatcatctctc  9402500
                                                                                               <----
                                                                                               -----
                                                                                        ----------->GT1
                                          ----------->GT1                              <------NtERF2
                                 <---------YAB1                     <---------AHL20(2) ----------->GT1
                               <---------ICU4                   <---------ICU4        <---------MYB46(3)
                               --------->YAB1               <---------AHL20(2)        ----------->GT1
              <---------ANAC46<---------YAB1               --------->AHL20(2)        --------->ALFIN1
         <---------ANAC58  --------->AHL20(2)          --------->AHL20(1)          <---------ANAC46
         <---------ANAC58  --------->AHL20(1)          <---------AHL20(2)          <---------ANAC58
    <---------At4g35610    <---------AHL20(2)          --------->AHL20(2)          <---------ANAC58<
    --------->At4g35610   --------->AHL20(2)  ---------->DOF2  <---------ATHB12   <------MYB83 -----
    --------->ZAT2   ------------>CBF   <------------CBF   <---------AHL20(2)     <------MYB46(1)  -
----------->AGL15--------->REM1(2)<-----------GT1     --------->AHL20(2)        <--------P    ------
 
tctatatagctggcttctcgtgaagacaattttattattactatattgtaaaagaaaaaaaattaaatcattttttttttttggtagggtggggaaaaaa  9402600
            --------->ANAC58
        --------->YAB1
        --------->ATHB12
    -------->ATHB1
    --------->ATHB12
    <---------ICU4
   <---------ATHB12                                <---------AHL20(2)
<---------AHL20(2)                                 <---------ATHB51
-----AHL20(2)                              <----------ID1
---->AHL20(2)                              ----------->GT1                            <-------------
---------AHL20(2)                        ---------->DOF2                        <-------TEIL
---->AHL20(1)                    ---------->DOF2 --------->YAB1                <<<<<<<<<<<<<<<<<LFY
-------->AHL20(2)  ----------->GT1 ----------->GT1--------->AHL20(1)        ----------->GT1
--->AHL20(2)--------->ANAC58 <----------DOF2   --------->AHL20(2)         ---------->DOF2          -
 
aattaaatcattgataggcaaatggataatttctttgaaagtgaaaaagaaaaaataatgggactcgtcgaagttagtaaagttacattggttttagttt  9402700
                <-----------GT1
               ----------->HVH21
               --------->WRKY38(1)                         ---------->DOF2
          <---------TOE2(3)                          ------->GAMYB
    <----------DOF2                                 --------->MYB46(3)
    <---------DAG2                             --------->ANAC46    --------->MYB52(1)
  ------>ZmHOX2a(1)         <----------DOF2  ----------->RAV1(1)  --------->CCA1(2)           ------
-----------ANAC81    --------->AtLEC2       --------->ANAC46    --------->CCA1(2)             <-----
--------->ID1--------->CCA1(2)       <-----------GT1<---------MYB52(2) <-----------HVH21  ----------
 
ttgtcctctttttgagatttgaccattcaaacttttatattttcttcccaacacaacaaaccaaaagagataagggtcatagaaaataatgcataaagaa  9402800
                                                 ----------->GT1
                                               <---------At4g35610
                                               --------->At4g35610--------->ANAC58
                                         <-------GAMYB            --------->ANAC46
           --------->ATHB12             --------->MYB111(1)       --------->ANAC58
          <---------YAB1                --------->MYB111(2)      --------->SPL7          <---------TOE2(3)
        <------ZmHOX2a(1)               <---------MYB46(3)     <---------SPL7      --------->AHL20(2)
  <---------AHL20(2)                    --------->MYB55(2)   --------------->AtSPL3<---------AHL20(2)
  --------->ATHB12                      --------->MYB46(2)   --------------->AtSPL8--------->AHL20(1)
 <---------AHL20(2)                  xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 --------->AHL20(2)                 <---------MYB46(3)       <---------------AtSPL3<---------AHL20(1)
--->ARR11(3)            --------->DAG2  --------->MYB52(2)  --------->At4g35610   <---------AHL20(2)
----ARR11(3)   ----------->GT1    <---------At4g35610       <---------At4g35610   --------->AHL20(2)
>DOF2  <---------YAB1  ---------->DOF2<---------MYB52(1)<----------DOF2    ----------->GT1
 
cttatttattaggattattggtaactaaaagtgttttagctgttagttggagctgtaaactttagctgtacgaaaaattagtaaaataaattgagaataa  9402900
                                                                                              <-----
                                      --------->ICU4                 <-----------GT1         ------>MYB46(1)
                  ---------->DOF2 --------->At5g28300    <---------HSFB2a(2)                 ------>MYB83
               --------->YAB1    ----------->GT1         --------->HSFB2a(2)     <---------YAB1-----
              <---------AHL20(2)------>ZmHOX2a(2)  ------->TEIL   --------------->AtSPL8    --------
      <-----------GT1       <---------YAB1 <---------AHL20(2)     <---------------AtSPL8<-----------GT1
 
aactgtttgtaacgtttttaataaagtttttgtgatcggtaaatattaaaactgtatgttttagaaaattttgtacagttttttaaaattgttaccaatc  9403000
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AGI:  At5g26751.1   
Description:  ATSK11 (Arabidopsis thaliana SHAGGY-related kinase 11); protein kinase. Identical to Shaggy-related protein kinase alpha (ASK1) [Arabidopsis Thaliana] (GB:P43288;GB:O04625;GB:O23151;GB:Q93VJ5); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G14640.1); similar to ATSK12 (Arabidopsis thaliana SHAGGY-like kinase 12), protein kinase [Arabidopsis thaliana] (TAIR:AT3G05840.2); similar to ATSK12 (Arabidopsis thaliana SHAGGY-like kinase 12), protein kinase [Arabidopsis thaliana] (TAIR:AT3G05840.1); similar to serine/threonine protein kinase [Adonis aestivalis var. palaestina] (GB:ABY60447.1); similar to AtSK12-like protein
Range:  from: 9399380    to: 9402479    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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