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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
YAB1
<------
ZmHOX2a(2)
--------->
CCA1(2)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
AGP1
<---------
ZAT6
---------->
DOF2
<---------------
AGL15
--------->
ANAC46
<-----------------
AGL1
<---------
ZAT14
--
ANAC55(2)
--------->
bZIP60(2)
<----------
DOF2
---------->
DOF2
--------->
YAB1
aatgactacatatacaaaaaaaacatagagacataacacatcacacaaaaagatccaaactttacaatagtggaaacaaagagagagtagtaatagtaac
9315100
--------->
TOE2(3)
--------->
ATHB12
<-------
TEIL
--------->
GLK1(2)
--------->
YAB1
<--
--------->
ZAT2
--------->
MYB46(3)
--------->
TOE2(3)
<--
--------->
At4g35610
<---------
ARR14(2)
------->
GAMYB
--------->
ZAT14
<---------
bZIP60(1)
--------->
ARR14(2)
--------->
MYB46(3)
--------
--------->
bZIP60(1)
<---------
ZAT18
<---------
ARR11(3)
<-----------
HVH21
--------->
YAB1
<--------
ctagtgacttcaccagcttcattagtgagcatttcagtcccagttcttccaacaacaat
ctgtgtcacattcaaccacaattacaaaaactatactcatt
9315200
<---------
ARR14(2)
<---------
WOX13(1)
<------
ZmHOX2a(1)
-------
YAB1
<---------
MYB52(2)
<---------
ETT(1)
-------
TOE2(3)
--------->
ANAC58
<-----------
GT1
<---------
HSFB2a(2)
->
ATHB12
--------->
ANAC58
<---------
YAB1
<----------
DOF2
--------->
HSFB2a(2)
-
YAB1
---------->
DOF2
--------->
ZAT18
----------->
GT1
------->
GAMYB
--------->
AtMYB61
gagattgatacaaaggagaagaaggggcacgaac
gaggaattggtaaatgctcatgctagcatcaacagcgattttccgaccaaaatagctctcgaattt
9315300
--------->
TOE2(3)
----------->
GT1
<---------
HSFC1(2)
--------->
HSFC1(2)
<------
NtERF2
--------->
At4g35610
<---------
At4g35610
<---------
RAP2.6(2)
--------->
AtMYB61
--------->
ETT(1)
<---------
ETT(1)
<---------
DEAR3(1)
<---------
ARR14(2)
--------->
TOE2(3)
--------->
RAP2.6(3)
--------->
ARR14(2)
--------->
ANAC46
<-----------
HVH21
--------->
TOE2(3)
--------->
ANAC58
--
<----------
DOF2
<-------
TEIL
--------->
GLK1(2)
--------->
ANAC46
<-----
<----------
DOF2
<-------
TEIL
---------->
DOF2
--------->
TOE1(3)
--------->
ANAC58
<--------
ctgttctttcatacaactaggcgcattgtcggctaaaagcttcgttaaacc
ctaaaaatccgaccaaaaacacacacaaaacattagatcgaattcagga
9315400
---------->
DOF2
--------->
At5g28300
<---------
DEAR3(2)
--------->
TOE2(3)
--------->
ARR14(2)
--------->
TOE1(3)
<---------
ARR14(2)
<---------
ARR11(3)
<-------
GAMYB
<-----------
GT1
<---------
MYB46(3)
--------->
TOE2(3)
<---------
MYB46(3)
<---------
DEAR3(1)
------->
YAB1
--------->
MYB52(2)
<---------
RAP2.6(2)
-
ZmHOX2a(1)
<---------
TOE1(2)
<---------
ANAC46
--------->
ALFIN1
-
LBD16
<---------
MYB52(1)
------------>
AtMYB77
*
TSS
<---------
AtMYB61
atcgtaatctaaaactgaaacgagaagtaatcgtttgtttgaaccagac
cttaatacccat
ggcggttacagagaaag
ttagcgaatgcgaaggtgttgt
9315500
<---------
ZAT18
<---------
DEAR3(1)
<-----------
RAV1(1)
--------->
ALFIN1
<---------
ICU4
<-------
MYC2
----------------------->
TaNAC69(2)
--------->
YAB1
------->
MYC2
<---------
YAB1
<-------
MYC4
<---------
DEAR3(1)
------->
MYC4
<---------
ATERF1(1)
--------->
ANAC55(2)
------>
NtERF2
<---------
O2
<---------
ATERF1(2)
<---------
TGA1a
--------->
DEAR3(1)
========================
<---------
DEAR3(1)
========================
--------->
ATERF1(1)
--------->
TGA1a
--------->
ANAC58
--------->
O2
--------->
ANAC58
<---------
ANAC55(2)
--------->
ANAC46
<------------
OsbHLH66
--------->
O2
--------->
ICU4
<---------
ALFIN1
<---------
O2
<---------
YAB1
<---------
REM1(2)
--------->
TGA1a
------>
NtERF2
<---------
RAP2.3(3)
<---------
ALFIN1
--------->
DEAR3(1)
<------
MYB83
<---------
LBD16
<---------
ALFIN1
<---------
PCF2
--------->
MYB59
--------->
LBD16
<---------
ATERF1(1)
--------->
ZAT18
----------------->
AG
--------->
ATERF1(2)
------>
NtERF2
------->
MYC3
------------>
CBF
<---------
TGA1a
--------->
ANAC46
--------->
ALFIN1
===============================
bZIP_DOF
<---------
LBD16
<-------
MYC3
<
<----------
DOF2
------>
ZmHOX2a(1)
<------------
CBF
------>
ZmHOX2a(1)
<-----
<---------
ZAT18
<------
MYB46(1)
<------
NtERF2
<-----------
GT1
------------>
OsbHLH66
<--
ctctctctctctctcagggaactttgccaatttggtctcctcacgccggcgatgataattgttttcccgcctcctcaacacgtgtgggcgctagagtctg
9315600
<----------
DOF2
<---------
DAG2
<----------
DOF2
--------->
YAB1
=============
bZIP_DOF
------>
MYB83
<-------
GAMYB
=============
bZIP_DOF
------>
MYB46(1)
--------->
MYB111(2)
-----------
GT1
<---------
MYB59
<---------
MYB46(3)
----
YAB1
------>
NtERF2
<--------
P
<---------
ATHB12
--------->
YAB1
-------
WOX13(1)
<-----------
GT1
<-----------
RAV1(2)
---------->
DOF2
--------
attaactttatgaggcctttaaacctaatgagcccatcaggttgttaaggcccatcatatagttaaggcccatgagtcatagtccaaagaaatgttagtg
9315700
--------------->
AGL15
<---------------
AGL15
------->
TEIL
<----------
DOF2
----------->
GT1
<-------
TEIL
<---------
DAG2
--------->
DAG2
--------->
KAN4(1)
-----
->
MYB52(2)
<----------
DOF2
<-----------
GT1
---------->
DOF2
<---------
KAN4(2)
<----
gaatcgaaactctcttttaagatgcatcttatatgactatatactttttggagctataaagttataagttgagagagagaatgttcaatgtagcccatat
9315800
--------->
ZAT14
<---------
ZAT14
------>
MYB46(1)
-------->
P
<-----------
GT1
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC58
----------->
GT1
<---------
AHL20(2)
<-----------
RAV1(1)
---->
AHL20(2)
<---------
AHL20(1)
--------->
ZAT14
-----
AHL20(2)
<---------
MYB52(1)
<----------
DOF2
------>
MYB83
<----------
DOF2
aaatgttctgagtttcgttatatgtaagggtatgctattcttttggcattttatttccctaccaatacagtgatgtcttttttgctggagacaaatccat
9315900
------>
ZmHOX2a(2)
--------->
At4g35610
<---------
At4g35610
--------->
ARR14(2)
<---------
ARR14(2)
<---------
AGP1
--------->
ARR14(2)
<---------
ARR14(2)
------>
ZmHOX2a(2)
--------->
CCA1(2)
--------->
ARR14(1)
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
-------
--------->
AGP1
----------->
HVH21
---------->
DOF2
<--------
<---------
ARR14(2)
<--------
P
<---------
GLK1(1)
----------->
ARR10
----------->
RAV1(2)
--------->
GLK1(1)
tctaagatccgatttggatctgaagccttcaaaaaacatatagttctcatcaaacctgactatgggttgataaagaaattcgaaatcagatttcagcaat
9316000
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AGI:
At5g26680.1
Description:
endonuclease, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G29630.2); similar to putative flap endonuclease 1 [Oryza sativa (japonica cultivar-group)] (GB:AAV59413.1); similar to Os05g0540100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056179.1); contains InterPro domain XPG N-terminal; (InterPro:IPR006085); contains InterPro domain XPG I; (InterPro:IPR006086); contains InterPro domain 5'-3' exonuclease; (InterPro:IPR002421); contains InterPro domain Helix-hairpin-helix motif, class 2; (InterPro:IPR008918); contains InterPro domain DNA repair protein (XPGC)/yeast Rad; (InterPro:IPR006084)
Range:
from: 9311885
to: 9315478
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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