Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ANAC55(2)   --------->ZAT14                                                                               ----  <---------DAG2                                                                        ---------->DOF2  <----------DOF2                                                                <----------DOF2 <--- ------->ZAT6                                                            <---------ANAC46       <---- -->ANAC55(1)                <----------DOF2                             <---------ANAC58 ----------- -->ANAC46   --------->At4g35610                                         <---------ANAC58--------->DAG2   aacactttacttatcatctaaaatcaataaactttcatttacaatcgaaaacttgcatttgcaatctagactatttcttggaccttttaaaaaagttatt  9156700          ----------->GT1   <---------------AGL15   --------------->AGL15                                                       ----------->GT1   --------->TOE2(3)                                                      <---------AHL20(2)  ----------------->AGL1                                             --------->AHL20(1)  ----------------->AGL3                                             <---------AHL20(1)  ====================================MADS_MADS                      --------->AHL20(2)  ----------------->AG                                               <---------AHL20(2) ----->AHL20(2)                                               <---------At4g35610 ------->TEIL ------AHL20(2)       --------------->AGL15       --------->YAB1    --------->AHL20(2) -----AHL20(2)     --------->GLK1(2) <---------MYB52(1)      ------->TEIL --------->AHL20(2) >GT1 --------->AHL20(2)--------->AHL20(2)       <---------YAB1     <---------AHL20(2)            ---   tatttccataaaatgtaagaaattctataaataggctctgttatccatactattatacatatgcatctaattttatttaaaatgtaactaaaacagttat  9156800                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)                                                                          <---------AHL20(1)                                                                         --------->YAB1                                                                      <---------ICU4                                                                      <---------AHL20(2)                                                                   --------->YAB1                                                              --------->AHL20(1)                                                         --------->AHL20(1)                                                         --------->AHL20(2)                                                ----------->GT1  --------->AHL20(2)                                            --------->GLK1(1) --------->AHL20(2)                                            <---------GLK1(1) <---------AHL20(2)  --------->ANAC46     <-------TEIL                      ------>MYB46(1)   <---------AHL20(2)     ----------->RAV1(1)-- ------>YAB1          --------->YAB1   ------>MYB83   --------->YAB1 --------->AHL20(2) <------ZmHOX2a(1)   tgataaatacattatatcacaaaataatcaaatgcaaaacctacagaaatcagtaaaaataaaataaaataataaatataatccacagaaggatgaaaca  9156900                                                                                           ------->MYC2                                                                                           <-------PIF5                                                                                           ------->PIF5                                                                                           <-------MYC4                                                                                           ------->MYC4                                                                                           ------->PIF4                                                                                          --------->O2                                                                                          --------->ANAC55(2)                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          <---------TGA1a                                                                                          <---------ANAC55(2)                                                                                          <---------PIF3(3)                                                                                ------>MYB83                                                                                ------>MYB46(1)                                                                                ====================MYC_MYB                                                                                -------->P--------->bZIP60(2)                                                                               ----------->RAV1(1)                                                                              ------->GAMYB<-------MYC2                                                                              ======================MYC_MYB                                                                              --------->AtMYB61                                                                             <---------ATHB12                                                                             <---------MYB55(2)               --------->ANAC46                                              --------->MYB46(3)               --------->ANAC58                                              <---------MYB52(2)             --------->At4g35610                                            --------->ANAC58             <---------At4g35610                                            ------>MYB83  --------->PIF3(3)         ----------->RAV1(1)                                                --------->ANAC58 --------        <---------ETT(1)                                                    -------->P  <------------OsbHLH66     <---------ARR14(2)                                                     ------>MYB46(1)<-------PIF4     --------->ARR14(2)                    --------->TOE1(3)                ========================MYC_MYB     --------->GLK1(2)                     --------->TOE2(3)              --------->AtMYB61<-------MYC3  <---------ANAC58                      <-----------GT1                  --------->MYB46(3)------->MYC3  <---------ANAC58  <---------ALFIN1 <---------ANAC55(2)            --------->TOE2(3) <-------------- ------->ALFIN1--------->ANAC58      --------->ANAC55(2)           --------->YAB1<---------ALFIN1   agtggcgattccgacagaagccactctcttctcagcctcatgtaaccttaaaaactgtgagtttctctaacataaaccaaccaacacttgccacgtgccc  9157000                                            <---------ALFIN1                                           <------NtERF2                                           --------->At4g35610                                           <---------At4g35610                                          <---------ATERF1(1)       --------->MYB46(3)                                          --------->RAP2.6(2)   ----------->HVH21                                  <---------MYB52(1)            --------->ANAC58                   --------->ANAC46 <---------DOF5.7(2)         --------->ANAC46                   <---------ALFIN1 ---------->DOF2 <---------TOE2(3)                 <---------ALFIN1 --------->DOF5.7(2)         <---------ALFIN1 ->ZAT18      ------>ZmHOX2a(1)  <-------GAMYB  <----------DOF2 --------->ANAC58               <----- --PIF3(2) ------>ZmHOX2a(1)   <-----------------AGL1         --------->ANAC46     ----------->HVH21<   agtcccattactcctcctcacacacctcttgagtccgttaaaggccgctccttttatgttatccacacgacccatcgttttggctctgactctatattca  9157100        <---------AHL20(2)        <---------YAB1        --------->AHL20(2)       --------->TOE2(3)                             --------->ARR11(3)       --------->YAB1                    <---------AHL20(2)     --------->AHL20(1)                  <---------ICU4        <----------DOF2    --------->AHL20(2)                  <---------ATHB12  <-----------GT1    --------->YAB1         <---------ARR11(3)        <---------GLK1(2)          --------->YAB1 --------->YAB1            <---------GLK1(2)         <---------ARR11(3)        <---------ATHB12 ------GT1                 --------->ARR11(3)*TSS   <---------RVE1(1)--------->YAB1   --------->ANAC46 ---------YAB1       <-------TEIL  <---------At4g35610  <-----------GT1      --------->WOX13(1)  <---   ctataataatattaatacacgagttcatagattttgaagctaataaatccacagagattttctctctttgatcacaattcaatcatacactctattctca  9157200                                           <---------------AGL15                                    --------->ATHB12                                 --------->YAB1  <---------TOE2(3)                       <---------TOE2(3) <------MYB83 ----------->ARR10        --------->At4g35610   <---------GLK1(2)  <---------TOE1(3)               <----------DOF2 ------CCA1(2)        ---------->DOF2    <------MYB46(1)    --------->At4g35610<-------TEIL   tctcttactcaggtcaaaactctctaaagttggaatcttgatttggtttttaaggtaagattagctcaaaatgagtttaggtgctttgatggaagagaag  9157300                                                                                                    <                                                                                             --------                                                     <---------WOX13(1)                      <-------                                                    <---------GLK1(2)                        <-------                                <-------TEIL       --------->ATHB12                      <---------DEAR3(1)                     <<<<<<<<<TBF1    <-----------HVH21        <---------ANAC58         ------>ZmHOX2a(1)       --------->MYB46(3)   <---------TOE1(2) --------->ARR11(3)           <---------TOE2(3)---------     ----------->RAV1(1)   <-----------RAV1(2)>>>>>>>>>>GT-1   <---------ANAC58  <-----------GT1<----   agaagagcaacaacttcatcttcttcttctcaggtacatatgtcaaatgatatagattggcaaatgcttgataaatcgaggtttttcttcctcggtgctg  9157400                    --------->ZAT14             --------->ARR14(2)      <---------LBD16 ----------DOF2     <---------ZAT14                                    --------->TGA1a ->ABI4(2)   <---------ARR14(2)                                        --------->O2 --ZAT2      ------->TEIL <-----------GT1             ----------->RAV1(1)        <-------MYC3 --At4g35610<---------CCA1(2)                        <----------ID1    <---------TGA1a >ALFIN1--------->LBD16 <----------DOF2           --------->ANAC58     <---------O2   ----------->RAV1(1) -----At4g35610--------->MYB46(3)                 --------->ANAC58 ------>NtERF2 ------->MYC3   ctcttttctccggtgtatccactgctctttaccctattgtagttctcaaaacaaggcaacaagtctctccgactcgtgtctcatgtgccaacatttctct  9157500                                                                          ------->MYC3                                                                          ------->PIF5                                                                          <-------PIF5                                                                      <---------ZAT2                                                                     --------->LBD16                                                                 ------>MYB46(1)                                                                 -------->P <---------ZAT18                                                                 ------>MYB83                                                               --------->AtMYB61                                                              --------->MYB46(3)                                                              <---------HSFC1(2)                                                              --------->HSFB2a(1)                                                       <---------ANAC58   ------->MYC2                                                       <---------ANAC58   <-------MYC3                                                       <---------ANAC46   <-------MYC2                                                       <---------AtLEC2<------------OsbHLH66                                                   <----------DOF2   ------>NtERF2                 <---------ARR11(3)             --------->ARR11(3)  --------->LBD16                 --------->ARR11(3)             <---------ARR11(3) <---------LBD16         --------->ZAT14     <---------ANAC58     ----------->GT1 <---------HSFB2a(2) <---------HSFB2a(1)          <---------ZAT14     <---------ANAC58 ---------->DOF2     --------->HSFB2a(2) --------->HSFC1(2)           --------->ZAT18   ggctattgctagacttgaaggtcttaaagggttttacaagggttttggaacatctttgcttggaaccatcccggctcgtgctctctatatgactgctcta  9157600  Previous    Next  AGI:  At5g26200.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT1G72820.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96364.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 9157145    to: 9158407    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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