Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ---------->DOF2  --------->ZAT14                                      <---------------AGL15 --->ANAC46                                            --------------->AGL15     <---------ARR14(2) -->LBD16  --------->ARR14(2)                         <-----------------AG --------->At4g35610 ---LBD16 <---------GLK1(2)    <----------DOF2        <-----------------AGL1     --------->ARR14(2) <   gaagtttactcagaaactgcttaaacattctctctttcccaaaaatttcaaaactttcacaaattgggaatcaaagaagctcaaatccacatattagccc  8884400                                                                               --------->At4g35610                        ----------->HVH21                                 >>>>>>>>>TBF1                     <---------AGP1                                   --------->LBD16                     --------->ARR14(2)                             ------>ZmHOX2a(2)          ---------->DOF2      --------->AHL20(2)                  --------->CCA1(2)       ------>NtERF2 <---------ARR14(2)                            <------ZmHOX2a(2)       ----------->RAV1(1)    --------->AHL20(2)       <-----------RAV1(1)------------------------>ANAC81      ----------->HVH21------>ZmHOX2a(2)         ------->MYC3     --------->AGP1              <------      <---------ETT(1)<---------At4g35610        <-------MYC3     --------->ARR14(2)          -------      --------->ANAC46--------->At4g35610       <---------ANAC46  <---------ARR14(2)        --------- ---------GLK1(2)    ------->TEIL     --------->MYB52(1)        ----------->ARR10  ----------->GT1   taaattctccgacaaagaacatggatctgacattaaaaaaaaacagagaaacgtgtaatgtgggtttagatccgaagaagaagcagagaaaaaaaaaagg  8884500                                              <---------ANAC58                                              <---------ANAC58           --------->ATHB12                                    <--------HAHB4                       <---------ICU4                                    <---------ICU4                      <---------YAB1              --------->ANAC58      --------->YAB1                    --------->YAB1              --------->ANAC46      --------->ATHB12        <-----------ARR10          --------->YAB1           <---------ATHB12         --------->ARR11(3)         --------->ANAC58    <----------DOF2                --------->ICU4           --------->GLK1(2)          --------->ANAC46 ---TOE2(3)   --------->ANAC58     <---------YAB1           <---------ARR11(3)    <---------ARR14(2) -->DAG2 <---------YAB1       --------->TOE1(3)       ------>ZmHOX2a(1) --------->ICU4 --------->ANAC58 ->DOF2--------->YAB1         --------->TOE2(3)<----------DOF2--------->TOE2(3)   --------->ARR14(2)   ttgacacttttataatacccaatacttgaaaaccctaatcattaccttgctttctccttcaaaatcttattctcatgattccagtatccacgaacaaaaa  8884600                                                                      <---------HSFB2a(2)                                                                      --------->HSFB2a(2)                                                                     <---------LBD16                                                                   --------->GLK1(2)                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                                                                  ------>MYB83                                                                  ------>MYB46(1)                                                                --------------->AGL15                                                                <---------------AGL15                                                               ----------------->AG                                                               <-----------------AGL2                                                               ----------------->AGL2                  ----------->GT1                              ----------------->AGL1    --------->MYB52(1)   ------>ZmHOX2a(1)----------->GT1                     ---------->DOF2       <------ZmHOX2a(1)   cattcctagagagagagagagagagaaaaaaaaaactgaagctagagagtttttcaaaaaaagaaaccaaatctggaagaggaagaacaaaaaacagagt  8884700                                                                                             <-------                                                                                            <--------                                                                                           <---------AHL20(2)                                                                                         <---------YAB1                                                                                        --------->AHL20(1)                        <---------MYB52(1)                                             --------->AHL20(2)                  --------->ATHB12                                                     <---------AHL20(2)                 <---------YAB1                                                       <---------AHL20(2)              <---------AHL20(2)                                ---------->DOF2  <------ZmHOX2a(1)  <             --------->AHL20(2)        --------->ATHB12 <---------GLK1(1)     <---------AtLEC2  <----   ttggattttgagaaattttatgattcgttacggtgttttcttcattgtttttttttagatttctgagaaagaagaaatttgcaggaaaattattttaact  8884800      <---------AHL20(2)<---------DAG2      --------->AHL20(2)<----------DOF2     --------->YAB1  <-----------GT1              <---------ANAC58 ------>ZmHOX2a(1)   ---------->ID1  *TSS         <---------ANAC58 ----GT1<------------------------ANAC81        <---------ARR14(2)              <---------ICU4 ---GT1<---------AHL20(2)       --------->HSFB2a(2)                           --------->ICU4      --- ---------MYB59     <-----------GT1 ---------->DOF2                          <---------AHL20(2)   --- ------DOF2    ---------->ID1   <---------HSFB2a(2)                    --------->AHL20(2) --------->ARR11(3)   ttcctaattttaattttgtttttttcctttttgtctcgaaaagacagcgttttcgtttcagttttatttccgataatataaaaattagaaaacatctcgc  8884900                                             ------>MYB46(1)                                             ------>MYB83                                             -------->P                                       --------->GLK1(1)         <-----------GT1           --------->ANAC58       <---------YAB1              ----------->GT1                                  <------MYB46(1)     <---------ICU4                --------->ANAC55(2)                              <------MYB83     -------->ATHB1                <---------ANAC55(2)                             --------->MYB59    <---------AHL20(2)             --------->ANAC58                           <---------AHL20(2)    --------->ICU4                 --------->ANAC46                       ------>ZmHOX2a(1)    <---------ATHB51          ----------->HVH21                          --------->TOE2(2)    --------->AHL20(2)        --------->WRKY12--------->MYB46(3)         --------->TOE2(3) ------>ANAC58   <---------MYB52(1)--------->ANAC55(1)               --------->GLK1(1) ------>ANAC58<-------TEIL   --------->DOF5.7(2) <---------MYB52(1) <------ZmHOX2a(1)       ---------   atgcaaattattaacgtccgtttgatgagacgttgacacgtaaatccaaccgttggatttgtctgagagaggaatcctaagtaatttggttcgctaaggc  8885000             ------->TEIL        --------->YAB1                                                            --------->HSFB2a(2)     --------->YAB1                                ------------>CBF               <---------HSFC1(1)     <---------ICU4    ---------->DOF2       <---------DAG2                       <---------HSFB2a(2)    <---------YAB1 --------->YAB1          ---------->ID1             ------>ZmHOX2a(1)  --------->YAB1  <---------YAB1     --------->ARR11(3)              --------->ANAC46              <- --------->AHL20(2)<--------HAHB4--------->YAB1   --------->YAB1  <---------ARR14(2)       *TSS    <- ->DOF2<---------YAB1<---------YAB1<---------YAB1 <-----------GT1 --------->ARR14(2)     --------->GLK1(2)   ccatttattattatgagcctattattaaagcccatttatgattttggccttatcacaattcacaagagtatcctccactaatctctagaagaaactgttt  8885100                 <---------ARR11(3)           <---------ZAT2           --------->ZAT2           =============================RAV           <---------At4g35610           --------->At4g35610           ----------->RAV1(2)         <-----------RAV1(2)         ===============================RAV      ------>MYB46(1)      ------>MYB83    <---------MYB52(2)                                                                     --------->ARR14(2)    --------->MYB46(3)                                                                     <---------    --------->DEAR3(1)                                             <---------TOE2(3)       <---------ARR14(2)    <---------MYB46(2)      ----------->RAV1(1)              <----------DOF2               <---------ARR11(1)   --------->ANAC58      --------->ANAC46               <---------At4g35610                <---------ARR11(3)   --------->ANAC58 <----------DOF2            ----------------->AGL3            <----------DOF2 ----------TGA1  --------->ARR11(3)            --------->LBD16     <---------TOE1(3)       --------->ARR11(3) ----------HVH21--------->GLK1(1)              ----------------->AGL2      <<<<<<<<<TBF1  <---------CCA1(2)   tcgtcaccgaaccagctgaaatctttttcgcaacaaaacaaactctatccccaaattcagaagctttttagggtttcttcttcctttcgcacatatcttc  8885200                                  ---------->ID1                            <----------DOF2                         <---------ARR11(3)                         --------->ARR14(2)            <---------AtLEC2                         ------->TEIL              <----------DOF2        <---------AHL20(2)                         <---------ARR14(2) <---------ANAC55(2)       <---------AHL20(2)                        <---------CCA1(2)   ----------->GT1       --------->ICU4  <---------WOX13(1)  <---------ANAC58     --------->MYB59     <------NtERF2               <--------- --ARR10              <---------ANAC58 --------->WOX13(1)    --------->ETT(2)              <---------DAG2   tccgattgattttgcagtgaaattgtgtatctttttgttgttaatcaggtaaacttttcatggtcgccatgtttattttttcgctagatcgagctttttt  8885300  Previous    Next  AGI:  At5g25510.1    Description:  serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative. Identical to Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform (B'IOTA) [Arabidopsis Thaliana] (GB:Q93YV6); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.2); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44117.1); similar to protein phosphatase 2A B'kappa subunit [Oryza sativa (japonica cultivar-group)] (GB:CAC85920.1); similar Range:  from: 8882471    to: 8884837    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g25520.1    Description:  transcription elongation factor-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44119.1); contains InterPro domain Transcription elongation factor S-II, central region; (InterPro:IPR003618); contains InterPro domain Spen paralogue and orthologue C-terminal (InterPro:IPR012921) Range:  from: 8885091    to: 8889623    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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