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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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               <---------AGP1
             ----------->ARR10
             <---------MYB46(3)
           <---------MYB52(1)
      --------->MYB52(1)
     ------->GAMYB----------->GT1
    --------->MYB46(3)    <---------ANAC58
    <---------MYB55(2)    <---------ANAC58                        <-----------GT1>>>>>>>ZML2
    <---------MYB52(2)  <-----------GT1 ----------->GT1     <------ZmHOX2a(1)    <---------HSFB2a(2)
  ----------->RAV1(1)--------->YAB1 ---------->DOF2        --------->ICU4        --------->HSFB2a(2)
----->ANAC46<--------P  --------->ARR11(3)              ---------->DOF2  <-----------GT1       -----
 
aacaacaacaaacgggtagttctgtaataacttgtctataaaagggctaaactaaacatgaaaggattatcacatcttactgttctagcaacaacatcca  8869300
                                                                                       <---------At5g28300
                                                                                  <---------TOE2(3)
                                                                             --------->ATHB51
                                                                             <---------ICU4
                                                                             --------->ATHB12
                --------->ANAC58                           ---------->DOF2  <---------YAB1
                --------->ANAC58                         <---------YAB1     --------->ICU4
        ----------->GT1--------->AHL20(2)             --------->ICU4      --------->YAB1          <-
----->DOF2    ---------->DOF2 ---------->DOF2    ----------->GT1  <------ZmHOX2a(1)   <-----------GT1
 
aagctataaacttgtaacaaagcaaattcaatagaaagagtctaagaacagtgagtaaatatcaaaggaggagtgagtcataattgaagttaccatggat  8869400
                                                                ------>ZmHOX2a(2)
                                                              --------->ARR14(2)
                                                              <-----------ARR10
                                                              <---------ARR11(3)
                                           <---------ANAC58   <---------ARR14(2)
                                           <---------ANAC58   --------->ARR11(3)
                                --------->HSFC1(1)           <---------CCA1(2)
                <---------HSFB2a(2) --------->ANAC58        ----------->ARR10                   <---
                ------>ZmHOX2a(1)   --------->ANAC58     <---------ANAC46                    <------
 <---------GLK1(1)              <---------HSFC1(1)       <---------ANAC58             ----------->RAV1(1)
 --------->GLK1(1)              <---------HSFB2a(2)      <---------ANAC58          --------->ANAC58
--------TOE2(3)<---------LBD16  --------->HSFB2a(2)      <---------AtLEC2          --------->ANAC58
 
ttagatttccaagtttgtcctggagagagagacttccagaagcaaggcttgctcacatttgcttggatcttctcaatagcattcttaggcaacatttttc  8869500
              --------->ARR14(2)                                                             -------
    <---------ZAT2                           -------->P                     <---------AHL20(2)
    --------->ZAT2         <---------TOE1(3) ------>MYB46(1)                --------->AHL20(2)  <---
 ---------->DOF2 <---------HSFB2a(2)       <---------MYB59    --------->AHL20(2)      ----------->GT1
-------DOF2   <---------ARR14(2)     --------->YAB1           <---------AHL20(2)     --------->DAG2
-----GT1  <------ZmHOX2a(2)<---------TOE2(3) ------>MYB83    --------->AHL20(2)     ---------->DOF2-
 
ttttcaaagctggatcagttctgcaaaattagggtttgtatgatgacctacttgcatttgttcataaaattagagccaaaaaattggaaaagtaaaaaaa  8869600
                                                                                 <---------ANAC55(2)
                                                                                 ----------->GT1
                                --------->ARR11(3)                       --------->ANAC58   <-------
                                <---------ARR11(3)                   --------->ANAC58       <-------
               <-------TEIL    --------->CCA1(1)                     --------->ANAC58---------->DOF2
           ------->TEIL<------ZmHOX2a(1)                           ---------->DOF2--------->TOE2(3)
       <---------------AtSPL3  --------->RVE1(1)        ---------->DOF2  ----------->GT1  <---------
--->DOF2 ------------------>SPL14         ----------->GT1      <---------ANAC46 <---------TOE2(3)
-------ID1 --------------->AtSPL3        --------->ETT(1)--------->DAG2  --------->ANAC58 --------->MYB52(1)
-------->MYB46(3)    <---------------AtSPL8           *TSS  --------->ALFIN1   --------->MYB52(1)  -
 
gaacaaacactttgtacgtacaaggaggaacaaaatatctctggtcggaaaaaatgaagaaaagtggcgaagaagcaagtaataacgtaaaagtaacgtc  8869700
                                                                                         --------->AHL20(1)
                                                                                         <---------AHL20(2)
                                                                                         --------->AHL20(2)
                                                                                        <---------AHL20(2)
                                                                                        --------->AHL20(2)
                                                                                 <---------At4g35610
                                                                                 --------->At4g35610
                                                                               <---------DEAR3(1)
                             <---------ANAC58                                 <---------At4g35610
                             <---------ANAC46                                 --------->At4g35610
                         --------->LBD16                                      --------->ATERF1(1)
                        --------->DEAR3(1)                                   <---------RAP2.3(1)
                       <---------LBD16                                       ------>NtERF2
                      ------>NtERF2                                          <---------ATERF1(1)
                     --------->DEAR3(1)             <-------GAMYB           <---------RAP2.3(2)
                    --------->DEAR3(2)              <---------At4g35610     <---------RAP2.6(2)
                   --------->SPL7                   --------->At4g35610     <---------ANAC46 <------
 <----------ID1<---------------AtSPL3         <-----------HVH21             <---------DEAR3(1)
--ANAC58  --------------------->WRI1    --------->ANAC58                   ------>NtERF2<---------ATHB51
--ANAC58 --------->TOE2(3)   <---------ANAC58--------->DEAR3(1)            <---------LBD16  <-------
--GT1    --------->TOE1(3)<------NtERF2 --------->ANAC58                   <---------At4g35610------
-------->MYB52(1)<---------SPL7         --------->ANAC46            ------>ZmHOX2a(1)   <---------ATHB12
 
cctaacgacaaaccttaggtagtaccgccggagcgtgaacttcacgctccgtcgcagttgaagaaaacttcctctcgctgcggctgctcaaataatttaa  8869800
                                                                       >>>>>>>>>CBP60g
                                                                 --------->ANAC55(2)
                                                                 --------->ANAC46           <-------
                                                                 <---------ANAC55(2)        --------
                                                           <---------DAG2               --------->ATHB12
                                                           --------------->AGL15       --------->ICU4
                                                           <----------DOF2             <---------YAB1
                                                    <---------YAB1     >>>>>>>>>SARD1--------->YAB1
                                                 <---------YAB1 <---------LBD16--------->ANAC58   <-
                                                --------->AHL20(2)--------->LBD16    <---------ICU4
---AHL20(2)                                   --------->ICU4   <-----------GT1 --------->ANAC58-----
--AHL20(2)                               --------->ANAC58  <---------------AGL15    --------->ICU4--
---->DOF2           ----------->GT1      --------->ANAC58 <-----------------AGL3    <---------ATHB51
 
agtgactgagagagagagagagacagtcaaaagactcatgtctcatgccaatattatggtcactttttacggaaatttgggtaagaaattatgattaacg  8869900
                                          ------>ZmHOX2a(2)
<------NtERF2                  --------->DAG2        <---------ANAC55(2)
----GT1        --------->AHL20(2)      <------ZmHOX2a(1)                           --------->ZAT14
->MYB52(1)    --------->AHL20(2)     <---------TOE1(3)      <-------TEIL       --------->ZAT6
----------------AGL1          ---------->DOF2        --------->ANAC58         <---------YAB1
-->GAMYB      <---------AHL20(2)     <---------TOE2(3)--------->TOE2(3)   <---------DAG2   ---------
--------------->AGL1     ----------------->AGL1      --------->ANAC58     <----------DOF2 ----------
 
ggccgaataaggcccatttaaaatactggcccataaagttaaggatcgataacaaaacgtaagttcatcagtttgaactttatcagtaaacaaaaaagta  8870000
                                         <-----------TGA1
                                        <---------bZIP60(1)
                                        --------->bZIP60(2)
                                        --------->O2
                                        --------->bZIP60(1)
                                        --------->ANAC55(2)
                                        <---------ANAC58
                  --------->MYB52(1)    <---------O2
            <------ZmHOX2a(1)           <---------TGA1a
           --------->LBD16              --------->TGA1a
   <---------ANAC58                     <---------ANAC55(2)                                        -
   <---------ANAC58                     <---------ANAC58                                           -
  --------->HSFC1(2)                   <------NtERF2           --------->ZAT14                    <-
  <-----------------------TaNAC69(2)<-----------HVH21          <---------ZAT14                  <---
  <---------HSFC1(2)         <---------MYB52(1)    <---------ZAT18                        <---------At4g35610
>DAG2    <-----------RAV1(2)--------->LBD16        --------->ZAT18       --------->GLK1(2)--------->At4g35610
>DOF2    <---------LBD16  <---------LBD16<-----------HVH21    <---------ANAC46      --------->MYB52(1)
 
gtagaagcttgttcaggagaataactgattccggtaattggtcgcgtcacttagtgcatcaaattgtgtagtcaagaatcgaatagataccgaagcagag  8870100
                                          --------->ZAT18
                                      ------->TEIL
                                      --------->ARR14(2)
                                      <---------ARR14(2)
                                      <-----------ARR10
                                      <---------ARR11(1)
                                      --------->GLK1(2)
                                     <---------CCA1(2)
                                     <---------ARR14(1)
                                   <---------ANAC58
           <---------ALFIN1        <---------ANAC46
           --------->REM1(1)       <---------ANAC55(1)
   <---------ALFIN1                <---------ANAC58
   --------->AtMYB61               <---------ANAC55(2)
  --------->MYB46(3)               --------->ANAC55(2)
 ------>NtERF2                <---------ICU4
-------->ATERF1(1)           <---------ATHB12
-------->MYB46(3)           --------->ANAC58            <-------TEIL
--------ATERF1(1)           --------->ANAC46        <------ZmHOX2a(1)
---ZmHOX2a(1)               --------->ANAC58  ---------->DOF2    <-------TEIL
 
gagccaccactgctacacttaaactgtttccaagcattgcgtatctgcacaaagaggagttcatgagattcatgttcttgtgttcaactatttccacatt  8870200
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AGI:  At5g25475.1   
Description:  DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25470.2); similar to DNA binding [Arabidopsis thaliana] (TAIR:AT5G25470.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340)
Range:  from: 8867800    to: 8869655    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g25480.1   
Description:  DNMT2 (DNA METHYLTRANSFERASE-2); DNA binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO44188.1); contains InterPro domain C-5 cytosine-specific DNA methylase; (InterPro:IPR001525)
Range:  from: 8869876    to: 8872265    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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