Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------TGA1a    --------->TGA1a                                                               <-----------GT1    <---------O2                                                                <-----------GT1    --------->ANAC55(2)                                                    <---------MYB52(1)    --------->ANAC46                                                    ------>ZmHOX2a(2)    --------->ANAC58                                                   <------ZmHOX2a(2)    --------->ANAC55(1)                                               <---------ARR11(3)    --------->O2                 <---------YAB1                       --------->AGP1    --------->ANAC58           --------->AHL20(2)                     <---------AGP1 -----------GT1                <---------AHL20(2)                     --------->ARR11(3) -bZIP60(1)                   <---------AHL20(2)                      <---------ARR14(2) >bZIP60(1)         ------>ZmHOX2a(2)<-----------RAV1(1)              --------->ARR14(2) ------------->TaNAC69(2)  <---------AHL20(2)                        <---------CCA1(2)    <---------YAB1   ttttacacgtctctcgtttggatcgatgtttatttatttttgttgttcgtaatttgagtttttttgtttgtagatctgtttttttctctgttcttatttt  8814800                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC46           ------                                                                    <---------ANAC55(2)        <-----                                                                    --------->ANAC55(1)       <------                                                                    --------->ANAC55(2)       -------                                                          <--------ATHB1                      <------                                                          --------->ATHB12          --------->ARR14(2)                                                         <---------YAB1          <---------MYB59                   <-----------GT1                       --------->ICU4         --------->ANAC46         ---------->ID1                      <---------YAB1        <---------LBD16  <---------ARR14(2)         <---------TOE2(3)  <---------MYB52(1)           <---------ATHB12       ----------------->AGL1   tctaagtgtttgtggtttttttttctctctgttttgtttgtatgtttatgtttcagacaatgatttgatcacggaaacatataccgaattcagacaatga  8814900                                          --------->ANAC58                                          <---------ANAC55(2)                                          --------->ANAC55(1)                                          --------->ANAC55(2)                                          --------->ANAC58                                      <-----------HVH21                                   <------------CBF                  --------->YAB1     <---------YAB1              <---------YAB1                     <---------ATHB51 --->ATHB12                  <---------ANAC58                       <---------ATHB12      <---------At4g35610 ---ATHB1                    <---------ANAC58                   <---------YAB1      ------>ZmHOX2a(2) ---ATHB12                 <-----------GT1--------->ANAC46      ------------>CBF  --------->ARR11(3) -->ICU4                   <---------AHL20(2)         <---------TOE2(3) --------->YAB1   <---------AtMYB61 ---YAB1               <---------AHL20(2)<---------LBD16     --------->ICU4     <---------YAB1   tttgatcatgtttgtgtttatgtttttattttcttgttattgtcacggaaacatttaagaaaaatgatcaataataagaaatatgatcgtggaggtgatt  8815000                                   <---------AHL20(2)                        <---------ATHB12                                  --------->AHL20(2)                         ------------>CBF                       ---------->DOF2                              --------->ARR11(3)                      <---------WRKY12                              <---------ARR11(3)                      <---------WRKY38(1)                        <---------TOE2(3)   <----------DOF2                      <---------WRKY45<-----------RAV1(1)       ---------->DOF2   <---------ARR11(3)                    <-----------HVH21<---------TOE2(3)   <---------ANAC58   --------->ANAC58           <---------AHL20(2)     <---------AHL20(2)     <---------ANAC58   --------->ANAC58       <---------GLK1(2)          --------->AHL20(1)   <-----------GT1      --------->ANAC46   ttttgtatagaatttttttttgggtcaaagatgaaatttaatgttgggaacttgattttacttgtttaaagttcttccactcaatttctttcaagtttat  8815100                                                                                           <---------MYB46(3)                                                                                 <---------TOE2(3)                                                                                <-----------RAV1(2)                    <------------CBF                                      <---------WOX13(1)             ------>ZmHOX2a(2)                                           <------------CBF<---------ANAC46            <---------At4g35610                                         --------->ATHB12 <---------ANAC58       --------->CCA1(2)                                               <---------YAB1    <---------ANAC58    <---------TOE2(3)                                               --------->ZAT6  --------->ALFIN1    ----------->ARR10                      ------->TEIL           <-----------GT1<---------TOE1(3) --   gaagttgagatttgatctcactaattgagcatgcgatttttcttgaatctgaatttgctaacattttttaactctgattgattcaggtttggcttgttga  8815200                 <---------YAB1                 <---------AHL20(2)                                                                 -             <-----------TBP                                                                      ---     <---------ANAC58                                                                           <----     <---------ANAC46                                                                        <-------     <---------ANAC58                                            ---------->DOF2        <---------HSFC1(2)   --------->ZAT14                                      ---------->DOF2                 --------->HSFC1(2)   <---------ZAT14         <---------ATHB12        --------->ZAT18    --------->ANAC58  <---------HSFB2a(1) ------->ATHB12--------->YAB1 --------->AtLEC2     <---------ZAT18    --------->ANAC58  --------->HSFB2a(1)   atcagtggagtgtttttttataatttgaaatcatgcatagagcttcttctaagcacactaatgcgaagaaagaagcaatctctacttcgaaaattcgaga  8815300                                                                                                    -                                                                                               <----- --------->YAB1                                                                             <-------- <---------ICU4         <---------ARR11(3)     --------->ARR14(2)                           <-------- -------->ICU4     <------ZmHOX2a(2)           <---------ARR14(2)                      --------->ALFIN1 ------>YAB1       ==========================HOX2a_HOX2a                             <---------ANAC58 -----ARR11(3)    <---------ARR11(3)     --------->ALFIN1         <----------DOF2    <---------ANAC58 --HSFB2a(2)      --------->ARR11(3)  <------ZmHOX2a(1) --------->YAB1               <---------ANAC46   taataatgtgagagtcactagatcaagagctaaggccttaggagtgtcgaattctccatcaaaacccgcttttaaacatgaaacgaagcgtgttgctaga  8815400       --------->MYB52(1)                                                                 ----------- ---------->GT1                                                                         ---------->DOF2 ----WRKY18(1)               <-----------GT1           <---------DEAR3(1)       <----------DOF2 -ANAC58          <------NtERF2               ---------->DOF2                --------->ZAT6 -ANAC58          <---------At4g35610     --------->YAB1                 <---------MYB52(2)   <------   ccgagtaataaacgaatggcatcggataatatcacagtttgtaatcagaaaagacgagcggtgctcaaggatgtgactaacactttggcagaaagtataa  8815500                  <---------TOE1(3)                          <---------ARR14(2)                  <---------TOE2(3)                          --------->ARR14(2)                   ===              --------->YAB1                   <XXXXXXXXXXXXXXXXXXXXMIR420                 --------->YAB1 --------------->AGL15                   <----------DOF2  <---------ANAC46                 -------->HAHB4 <---------------AGL15               <----------DOF2  --------->ATHB12                    <---------YAB1 >GT1   --------->ANAC58          <---------YAB1   <---------ANAC58                ---------->ID1 <-- ---YAB1--------->ANAC58      <---------AHL20(2)   <---------ANAC58  <---------AtMYB61   <---------TOE2(3)   tttctacagaaggcaatgttaaggtagcaaatttttatgctttctttgcattttcttgattcgtatatgttttggtttagaatttgttgttaatgataca  8815600                                                                       ----------->GT1                                                                       <----------ID1                                                                  <---------AtLEC2                                                                --------->ALFIN1                                                          <--------P ----------->GT1                                                        <---------ANAC46                      <------                     ----------->GT1                    <------MYB83<---------DEAR3(1)        -------             --------->ANAC58                           <------MYB46(1)<---------ANAC46       -------             --------->ANAC58                          --------->MYB46(2)                   ---------       <---------ANAC58                                --------->MYB59<---------------------WRI1       <---------ANAC58           --------->ANAC58     <---------MYB46(3)             --------->MYB52(1)   <-----------RAV1(2)  ---------->DOF2                <---------AtMYB61     --------->GLK1(2)<------ ==============RAV  --------->ALFIN1                   --------->MYB111(2)   --------->ARR11(3) ---------RAV1(1) <---------ZAT2  --------->ANAC58     --------->MYB111(1)   <---------ARR11(3)   atgtggcaggcttgcaagcgaggtggtaaagaaactaagcaaatagaagaagatggtttggtagatgtggatggcgaaaaatctaaactagcagaagatt  8815700  Previous    Next  AGI:  At5g25380.1    Description:  CYCA2;1 (CYCLIN A2;1); cyclin-dependent protein kinase regulator. Identical to Cyclin-A2-1 (CYCA2-1) [Arabidopsis Thaliana] (GB:Q39071;GB:Q9ZU09); similar to CYC3B (MITOTIC-LIKE CYCLIN 3B FROM ARABIDOPSIS), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT5G11300.1); similar to mitotic cyclin a2-type [Glycine max] (GB:BAA09465.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-te Range:  from: 8815233    to: 8817569    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version