Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ---------->DOF2                     <---------HSFB2a(2)                                                  ------>MYB83              <---------AHL20(2)                                                      ------->TEIL---          --------->AHL20(2)               --------->GLK1(1)                         <-----------GT1        --------->ANAC55(1)        --------->AHL20(2)                             ------->TEIL   ----        --------->ANAC58           <---------AHL20(2)                             <---------------AtSPL8        --------->ANAC46   --------->ARR11(3)                           ----------->GT1   ------>MYB46(1)        --------->ANAC58   <---------ARR11(3)                    --------->YAB1   --------------->AtSPL8   aactgcatacaagtaattaagttcccaaagctcttaattaatctgaattctatagaatgcaagtgaataagaaatggtgatatgtatgtaccatccatga  8789100                                                                      <---------HSFB2a(2)                                                                      --------->HSFC1(1)                                                                <---------ALFIN1                                                         --------->CCA1(2)                                                        --------->ARR14(2)      --------->AtMYB61                                 <---------ARR14(2)     --------->MYB46(3)                                 --------->ARR11(3)  <---------MYB55(2)                                    <---------ARR11(3)  --------->MYB46(3)                                    <---------GLK1(2) ------>MYB46(1)     ------->TEIL --------->YAB1        --------->ARR11(1) ------>MYB83        <-----------GT1                  --------->ICU4  <---------HSFC1(1) ------>MYB46(3)  ----------->GT1<---------YAB1    <---------MYB52(1) --------->HSFB2a(2)           < --->TEIL         <---------REM1(1)       <-------TEIL----------->ARR10                <---------MYB46(3)   accatccaccatcggaagagatgtaactcttggtgataataagattcatgtccgtcaagatttgcaccacttctagaagaagcccttgtttgttctcact  8789200                                                                                                   --                    ----------->HVH21                                                            <---           <---------YAB1                                                                       <----         <--------HAHB4                                                                         <----         --------->ATHB51            --------->At5g28300                 XXXXXXXXXXXXXXXXXXXX>MIR406         <---------ICU4            --------->ANAC58              <---------LBD16               ------        --------->ICU4             --------->ANAC58          <---------ARR14(2)                <-----        <---------YAB1<-----------------AGL1                 --------->ARR14(2)           <---------DAG2 -----------GT1<---------TOE2(3)   --------->ANAC46      <---------ARR11(3)  <---------YAB1   <------   attcaccttcattattaaacgtttgacatttttggacacgctaaatcacaaaaacacaagacctattcgcgcatagaataccattggaaccaatttttgt  8789300       --------->MYB52(1) --------->TOE1(3)                                                 --------->ANAC58 ----->TEIL                                                        --------->ANAC58 ------ZAT18 <---------ZAT18                                       --------->ANAC46 -----ANAC58 --------->ABI4(2)                                   <---------ALFIN1          ---------- -----ANAC58 --------->ZAT14                          ----------->GT1                 ------>ZmHOX2a(2) --------->AtSPL8                                   --------->At4g35610             --------->ARR11(3) ----------AtSPL8 --------->YAB1                    <---------At4g35610   ---------->DOF2  <---------YAB1 ---ANAC46------->GAMYB      <---------YAB1        ------->TEIL  --------->ANAC46 <---------YAB1   gtaccttcacaacggtgcaatcttgaatgctgtcattgtcaatatagaccctgcatctgtaaattacacacaccaaaaaagaagatgatcgtgatgaaaa  8789400                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                              --------->ETT(2)                                                              --------->WRKY12                                                              --------->WRKY38(1)                                                              <---------ETT(2)                                                         --------->SPL7              <---------GLK1(2)                                                        --------->MYB52(1)         <---------YAB1                                                       <---------SPL7---------->TaMYB80                               <-----------GT1       --------->At4g35610  <---------ANAC58                              <---------AHL20(2)    --------->ARR11(3)    <---------ANAC58 ------->TEIL         <---------WRKY12              <---------ARR11(3)<----------TaMYB80           <- ->GT1 --------->ARR14(2)   ------->TEIL <------ZmHOX2a(1)   --------->ALFIN1--------->WRKY38(1)-----   atgtatatggattcacattgttgttcaacgaatttatcacataggaagagagaagagcttacggtggaccgtatatgcgttcaccaagattgtcgaaatc  8789500                                                ----------->GT1                                             <---------ARR11(3)               <------NtERF2                 --------->GLK1(2)               <---------At4g35610           --------->ARR11(3)               --------->At4g35610     --------->LBD16              --------->ANAC58         ----------->GT1   ---------->DOF2                    --------->ANAC58                              ---------->DOF2 <------ZmHOX2a(2)                    --------->ANAC46                  --------->CCA1(2) -----ZmHOX2a(1)                      --------->ANAC58                 <---------ARR11(3)       <---- ---->YAB1    --------->ANAC58       <---------LBD16  --------->YAB1   --------->ARR11(3)   <--------   aggatcaaagtaaggccagcaaactttctgcatcgtctctacggaaaaatctgtaattagaattagggcaagagatatacaagaagaaaagagtaaacga  8789600                                                                                  <------MYB83                         <---------ANAC58                                         <------MYB46(1)   < -----GLK1(2)            <---------ANAC58            --------->DAG2             <---------WOX13(1) -- -DOF5.7(2)              <---------ANAC46           ---------->DOF2            <------------CBF   <--   ttctccacaaatttgagttttttttttgtgtgtatataagaaaacgttttggcaaaaagtgtgaagggaagagaaagattagattggtgttttagacaga  8789700     <------NtERF2    <---------ATERF1(1)                                <------MYB83                                 -    ------>NtERF2                                      <------MYB46(1)                            ---   <---------DEAR3(1)                                 --------->MYB59                           <----   <----------ID1                                     --------->MYB46(2)                        <---- <---------ATERF1(1)                                 <--------P          <---------ANAC58       <---- ---------DEAR3(1)              --------->YAB1<-----------GT1            <---------ANAC58       <---- ------->ALFIN1      <---------GLK1(1)   <------ZmHOX2a(1)        <---------TOE2(3)             <---- ----ZmHOX2a(1)      --------->GLK1(1)<---------------------WRI1--------------->AGL15      --------->YAB1   ggagggcgacgaatgaagaagagatttccacctataatacagaggatttaacaaggtaggcatttactaagtttagcttggggaataagtgtgtcataac  8789800                                                                        <---------ARR11(3)                                                                        --------->AHL20(1)           --------->MYB52(2)                                           <---------AHL20(1) -------->ALFIN1                               <---------ARR11(3)       --------->ARR11(3) ------>ALFIN1                                 --------->ARR11(3)      --------->CCA1(2) -----ANAC46                                   <-----------ARR10      <---------ARR11(3) -----ANAC58                        <---------AHL20(2)     --------->GLK1(2) -----ANAC58               ---------->DOF2     --------->GLK1(2) --------->YAB1                     < -----ANAC55(1)          --------->CCA1(2)    --------->RVE1(1) <---------YAB1        ----------->GT1 -----ANAC55(2)       ----------->GT1 ---------->DOF2 --------->YAB1  --------->ARR11(3)            -   gtgtggaagaagttagttttagagaagataaaagttatataaaagaaaaaatctaatcgaaattctattatagatatattttagagtaatgaaaaatcca  8789900                     --------->ZAT14               --------->YAB1                                                                      <-        --------->ARR14(2)  ----------->GT1                                                       ---        <---------ARR14(2) --------->ALFIN1         ---------->DOF2                            <-----       <------ZmHOX2a(1) <---------ANAC46   <---------ARR11(3)                       ----------->GT1 ---------HSFB2a(2)  <---------ZAT14        --------->ARR11(3)             ---------->DOF2     ------ -------->HSFB2a(2) <---------ZAT6     --------->WRKY18(1)              ----------->GT1<---------ZAT6   ttctagagaggattcaaatatagtgtagagtggtagtattggtcaagaacttgtcaaagtcaaatactaagaaatggtaaagagacttagtgaaaataag  8790000  Previous    Next  AGI:  At5g25320.1    Description:  ACT domain-containing protein. similar to ACR3 (ACT Domain Repeat 3) [Arabidopsis thaliana] (TAIR:AT1G76990.5); similar to ACR3 (ACT Domain Repeat 3) [Arabidopsis thaliana] (TAIR:AT1G76990.4); similar to ACR3 (ACT Domain Repeat 3) [Arabidopsis thaliana] (TAIR:AT1G76990.3); similar to unknown [Populus trichocarpa] (GB:ABG37643.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912) Range:  from: 8787406    to: 8789533    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version