Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->ANAC46                                <------ZmHOX2a(2)     ------>MYB83               --------->CCA1(2)     ------>MYB46(1)           <---------ARR14(2)     --------->MYB52(1)        <---------ARR11(3)    --------->MYB55(1)         --------->ARR11(3)   <---------MYB111(1)         --------->AGP1   <---------MYB46(2)          --------->ARR14(2)       --------->ARR14(2)   <---------MYB59            --------->At4g35610     --------->LBD16                    ----------->HVH21  <---------ANAC55(2)    --------->WRKY12           <---------LBD16       --------->ARR14(2)  --------->ANAC55(2)    --------->WRKY38(1)      --------->ARR14(2)      <---------ARR14(2) -----------GT1          ----------->HVH21        <---------ARR14(2)     <---------GLK1(2)--------->MYB52(1) ---->AHL20(2)          --------->DOF5.7(2)    --------->YAB1         --------->YAB1     ----------->TGA1 ->YAB1--------->ZAT6<---------TOE2(3)--------->ARR14(2)<---------ARR14(2)--------->GLK1(2)     -----   aattacctaacacaatagacataaacgttgacagatccacgattcgaaatcagaaccggaaccaaaatcaaatcagaatctcgatacagacctgacgatg  8467800                       ------>ZmHOX2a(2)                      --------->At4g35610                      <---------At4g35610                     <---------ARR11(3)                 <---------O2              --------->ANAC46                 --------->O2              --------->ANAC58                 <---------ANAC58    --------->At5g28300                 <---------ANAC55(2) <---------RAP2.6(3)              <---------ARR14(2)                 <---------ANAC58   --------->ANAC46            ------->TEIL     --------->YAB1                 <---------ANAC46   --------->RAP2.6(2)     --------------->AtSPL8   <---------YAB1 -                 --------->ANAC55(2)----------->GT1      <---------TOE2(2)      <<<<<<<<<ARR1      --                 --------->TGA1a  --------->At4g35610 <---------ANAC46--------->ARR14(2)           <-                 <---------TGA1a--------->MYB46(3)    <---------ANAC58<---------ARR11(3)       <-----       <---------HSFB2a(2)     --------->At4g35610    <---------ANAC58------->TEIL <-----------GT1<--       --------->HSFB2a(2)   --------->YAB1--------->ANAC58<------ZmHOX2a(1)    <<<<<<<<<ARR2  ------ ---->HSFC1(2)  <-----------------------TaNAC69(2)   <-------TEIL    <---------CCA1(2)--------->ATHB12   ctcccaattccagacggagacgtgatctgaatcatcagccgtaacaagccatggatgcgtaggatgtacctgtatcttcacaatcttaccattggtctgc  8467900             --------->LBD16             <------NtERF2            --------->ANAC46            --------->ANAC58            --------->ANAC58           <---------LBD16                                                                  <-------- --------->DOF2                                          <------ZmHOX2a(2)                  --------- ------->ARR14(2)                                       --------->ARR11(3)               ------->GAMYB --------ARR14(2)                                       <---------ARR11(3)  <---------ARR11(3) ----At4g35610                                 --------->ARR14(2)           <-----------ARR10   ----- -------RAP2.6(3)         ------>ZmHOX2a(2)    <---------ARR14(2)           --------->GLK1(2) <------ --->At4g35610 ----------->RAV1(1)       ----------->HVH21 --------->WOX13(1)     --------->At4g35610   cgaaatgctctcgcccgcaacatttcgatctctctctctctctctcacagttcttcaagatcaattagacaactcaaaaatctgagcacaactgcatccg  8468000                                                              <---------ZAT2                                                              --------->ZAT2                   ------                                                             --------->ANAC58                 <------ZmHOX2a(2)                                                         --------->ANAC58                    --------                                                         --------->ANAC58                    --------                                                        --------->DAG2                       <-------                                                  <---------HSFC1(1)                   --------->WOX13(1)                                                  <---------HSFB2a(2)                <------ZmHOX2a(2)                                                  --------->HSFB2a(2)               --------->AGP1                                                  --------->HSFC1(1)                <---------ARR11(3)                                                  <---------------AGL15        <------ZmHOX2a(2)                                                  --------------->AGL15       --------->ARR11(3)    <                                                 ----------------->AGL3       <---------ARR14(2)    -     <---------ARR14(2)                          <-----------------AGL2       --------->ARR14(2)   --     --------->ARR14(2)                          ----------------->AGL1       --------->AGP1 -------- -ARR14(2)                           --------->ANAC46  ---------->DOF2       <---------At4g35610 <--- >ARR14(2)                         <---------ALFIN1--------->LBD16          ----------->ARR10<------- ---->LBD16                   --------->AGP1     ----------------->AGL2  <-----------HVH21 --------->MYB59 ---LBD16                   --------->LBD16 <---------ICU4   --------->ANAC58--------->At4g35610<----   catagacgattcgactcacgagaaactctccagagctacacactaaaaatttccagaaaaagcaagcagggctatggtcagatccagatcaattagatcc  8468100                                 --------->AtMYB61                                --------->MYB46(3)                               ----------->RAV1(1)   <-------GAMYB              <---------ALFIN1   --------->At5g28300        --------->AtMYB61  <---------MYB46(3)          --------->DEAR3(1) --->MYB46(3)                --------->MYB46(3) ->AGP1                   ------>ZmHOX2a(2) ->ARR11(3)               --------->MYB46(3) --ARR14(2)              <------ZmHOX2a(2) ---------LBD16         <---------TCP16(1)                                                 --------->DAG2 -------->LBD16         --------->ARR14(2)                                                ---------->DOF2 ------->DEAR3(1)       <---------TCP20                                                <---------ANAC55(2) ->ARR14(2)             <---------ARR14(2)       --------->DEAR3(1)             --------->ANAC58 ------At5g28300      --------->LBD16         ------->GAMYB     <---------MYB52(1)    >>>>>>>>>>AtSR1 --ARR11(3)          --------->LBD16         --------->MYB46(3)--------->LBD16  --------->ANAC58   <- -----ALFIN1        <---------LBD16<---------MYB52(2)        <---------LBD16*TSS--------->ANAC46   --   accgcggttatcaaatgaaatgcccggatccaccaccactaactacaatcgccgaacaaaaactccggtagtgtcttcagacgcgaaacgcgtaaagcgc  8468200                                                                                           --------->LBD16                                                                                          --------->ANAC46                                                                                          --------->ANAC55(2)                                                                                    <---------------AGL15                                                                                    --------------->AGL15                                                                                   ----------------->AGL1                                                                                   <-----------------AG                                                                                   <-----------------AGL1                                                                                   ----------------->AGL2                                                                                   ----------------->AG                                                                                   <-----------------AGL3                                                                                   <-----------------AGL2                                                                              <---------AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(1)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3) ----                                             <---------YAB1                   --------->AHL20(2) ----                                            ------------>CBF         ---------->ID1----------------->AGL3                                           --------->YAB1          <-----------RAV1(1)    <---------ANAC55(2)                <---------YAB1  ---------->DOF2<------------CBF  <----------DOF2 <-----------GT1 <--- --------ARR14(2)    <-----------GT1      <---------ATHB12  <----------DOF2  --------->AHL20(2) ----- ------->ARR14(2)  <---------WOX13(1) ------------>CBF <-----------GT1--------->ETT(1)   <---------LBD16   gaatttgcgaaggctagtctgattaacccaaaaaaaaaggcccaataacaattgttttagccctttcctttgtcgcaaaatatattccatttacggaaat  8468300             <---------MYB46(3)           <---------MYB52(1)        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      --------->TCP20              <---------ANAC58      <---------ARR14(2)           <---------ANAC58      --------->ARR14(2) <----------DOF2                                                            - ----->AHL20(2)          <---------DAG2                                                           <-- ----->AHL20(1)      --------->ZAT14                            <---------ATHB51      ---------->DOF2 ------AHL20(2)      <---------ZAT14                   <---------AHL20(2)      <---------ICU4   ----- ---->AHL20(2)  <------ZmHOX2a(2)<-----------GT1   <----------DOF2             --------->YAB1  <-----   taattgtggatccgttggatcactgaacttttttttttcttgttcataagtttcttttttattcaaattatgggtttacaaacatcactaaagcccagtc  8468400                                                                                            <-------MYC3                                                                                            <-------MYC4                                                                                            ------->MYC4                                                                                            ------->PIF5                                                                                            <-------PIF5                                                                                            ------->MYC3                                                                                            <-------MYC2                                                                                            ------->MYC2                                                                                           <---------ANAC46                                                                                           <---------TGA1a                                                                                           --------->TGA1a                            --------->REM1(1)                                              --------->O2                           <-------TEIL                                               ----------->HVH21                       <---------------AtSPL8                                         --------->ANAC46                       --------------->AtSPL8                                         --------->ANAC58                     --------->DAG2                                                   --------->ANAC58                    ---------->DOF2                                             ----------->RAV1(1)                 --------------->AGL15                                       --------->ANAC58                 --------->TOE2(3)                                           --------->ANAC46      --                 <---------------AGL15                                       --------->ANAC58--------                ----------------->AGL1                                     ---------->DOF2 <---------O2         <-----------GT1----------->GT1                          <---------AHL20(2)--------->TOE2(2) --------->DOF2 ----------------->AGL3                <---------ZAT14  --------->ANAC58    <---------ANAC55(2) -------YAB1    <-----------------AGL2                --------->ZAT14  --------->ANAC58    ========== ---->YAB1      ----------------->AGL2            <---------------AtSPL8   ==========================bZIP_DOF ----ATHB12  --------->GLK1(1)                 ---------->DOF2   --------->AHL20(2)--------->TOE1(2)   atcaaagtatttcacaaatccataaagggtacaactaaacaccttgtagtaaagagtacagcgctaataaaacaagtcaaagcaacatacgacacgtgga  8468500                                               <---------ALFIN1                                               --------->AtMYB61                                               --------->DEAR3(1)        <---------ARR14(2)                                              --------->MYB46(3)         --------->ARR14(2)                    --------->ATHB12        <---------ALFIN1        ------>MYB83                   <---------YAB1<---------MYB52(1)     <---------ARR14(2)             --------->ANAC46    --------->DOF5.7(2)    --------->ARR14(2)   ------>ZmHOX2a(1)   <----------DOF2 <---------ATHB12        <---------ZAT2           ------>MYB46(1)            ------ --------->HVH21--------->DEAR3(1)         --------->ZAT2         --------->MYB46(3)           ------ ->ALFIN1   --------->SPL7      --------->TOE2(3) --------->AtMYB61--------->ANAC46            <----- =============bZIP_DOF<---------WOX13(1)  --------->ANAC46        ------->GAMYB  --------->ANAC46  --   tgtgacttttctcttacgccgatgattgtttcatcgttatctcccagcaccaccatcaaatccgataacccaccatttcctctacgacaatctcatcacg  8468600                                                                      --------->ARR11(3)                              --------->LBD16                         <---------ARR11(3)                          --------->ARR11(3)                 ---------->DOF2    <---------ARR14(2)    --------->ARR14(2)              --------->LBD16                           < --->ANAC58               <---------ARR14(2)             <---------HSFB2a(2)    ---------->DOF2     - --->ANAC58               <---------ARR11(3)             --------->HSFB2a(2)--------->YAB1         -- ----YAB1       --------->At4g35610           ------>ZmHOX2a(2)      ------->GAMYB  ----------->GT1<- --------->GT1  <---------At4g35610   <---------YAB1    <---------LBD16<------ZmHOX2a(2)  --------->AHL20(2)   cttgtaaatctgactctctgctccacaatatccagagtttatatttgatctaaatttctccagaacagcaacgatctatgacaaaagagaaataaaaaac  8468700  Previous    Next  AGI:  At5g24710.1    Description:  similar to hypothetical protein OsI_003062 [Oryza sativa (indica cultivar-group)] (GB:EAY75215.1); similar to hypothetical protein OsJ_002759 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12934.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45337.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 8458850    to: 8468176    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g24735.1    Description:  other RNA Range:  from: 8468334    to: 8469265    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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