Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         <---------RVE1(1)                                                                         <---------CCA1(1)            <---------ANAC58                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->ATHB12                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------WOX13(1)                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->AHL20(2)                <-----------GT1         <------MYB83--------->ARR11(3)  <---------AHL20(2)             <---------YAB1             <------MYB46(1)      xxxxxxxxxxxxxxxxxxxx --------->AHL20(2)             --------->AHL20(1)         --------->MYB59       xxxxxxxxxxxxxxxxxxxx --------ARR11(3)              <---------AHL20(2)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <--- ------->ARR11(3)              --------->AHL20(2)     <---------YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------YAB1 <---------ANAC58  <---------AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------ARR11(3) ------TOE2(3)     --------->AHL20(2)    ------->TEIL <---------AHL20(2)<---------ARR11(3)       <--- -->ICU4    <---------ANAC46  --------->ICU4    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------AHL20(1)   agatttaattgatttcgtatataaaatatgaaattattttacgaacttatttgtttataatttggtaacagatagatatttgaatattcagtatattttg  8354300                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  <------ZmHOX2a(2)                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                 --------->AGP1                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               xxxxxxxxxxxxxxxx>smallRNA(i)                               <xxxxxxxxxxxxxxxxsmallRNA(i)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                            <----------DOF2                            <xxxxxxxxxxxxxxxxsmallRNA(s)                            <xxxxxxxxxxxxxxxxsmallRNA(i)                           <xxxxxxxxxxxxxxxxsmallRNA(i)                           <xxxxxxxxxxxxxxxxsmallRNA(s)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        xxxxxxxxxxxxxxxx>smallRNA(s)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        xxxxxxxxxxxxxxxxxx>smallRNA(si3)                        <xxxxxxxxxxxxxxxxsmallRNA(i)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   ----------->HVH21 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   xxxxxxxxxxxxxxxx>smallRNA(i)                   xxxxxxxxxxxxxxxx>smallRNA(s)                  <xxxxxxxxxxxxxxxxsmallRNA(i)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 xxxxxxxxxxxxxxxx>smallRNA(i)                 --------->YAB1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                xxxxxxxxxxxxxxxx>smallRNA(i)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             xxxxxxxxxxxxxxxx>smallRNA(s)                                                          --            xxxxxxxxxxxxxxxx>smallRNA(i)                                                          <--           --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                <<<<           <---------ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <---           xxxxxxxxxxxxxxxx>smallRNA(i)<---------ATHB12                                          ----          <---------GLK1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 >>>>          xxxxxxxxxxxxxxxx>smallRNA(i) ---------->DOF2                                           ----          --------->GLK1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 ----         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                    <---         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <---        =================================HOX2a_HOX2a                                             <---        <------ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(i)                                           <----        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->CCA1(2)                     <-----      --------->MYB59xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    ------->TEIL        --------->MYB59----   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->YAB1        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------GLK1(2)xxxxxxxxxxxxxxxx>smallRNA(s) <--------HAHB4      ----------->GT1     --------->TOE1(3) >smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)     <---------ATHB12    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) xxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)  <---------YAB1<---------YAB1  --------->ARR11(3)----- ------ANAC58xxxxxxxxxxxxxxxx>smallRNA(i)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->TOE2(3) ------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)-------   cttcagattaggaaatctttgatgacccgtctttagatccaataagccctataattaagagatgaatattgtcgttaaatgattttggtaaccttaatga  8354400        <------ZmHOX2a(1)    ---------->DOF2 ------->TGA2(2) ---------TGA1 <<<<<<HY5                                                   ---------->DOF2 ------ANAC55(2)                                           <---------YAB1 ----->ANAC55(2)                                         --------->YAB1 >>>>>>HY5                                               --------->AHL20(2) ----->TGA2(1)                                          <---------YAB1 ----->O2                                            <---------AHL20(2) ------O2--------->ARR11(3)                          --------->AHL20(1) ------bZIP60(1)                                     --------->AHL20(2) ------TGA2(1)                                       <---------AHL20(1) -------STF1            <---------AHL20(2)       <---------AHL20(2) ----TGA2(2)            --------->AHL20(2)     ----------->GT1       ----------->GT1 ----->bZIP60(1)       <---------AHL20(2)      <---------ANAC55(2)  <---------TOE1(3)       <xxxxxxxx ------>STF1           --------->AHL20(2)      --------->ANAC55(2)  <---------TOE2(3)<-----------GT1 ---->TGA1         <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        --------->AHL20(2)----   cgtcataaaaggattttgtttttgattaaatttttctaatggcattgttatgtaattaattataaaagttaaggttatatataaaatatactttccaaat  8354500                    <---------MYB52(1)                   --------->At5g28300                  ----------->GT1                 ==============================MYC_MYB                 <------------MYB.PH3(1)               <---------DOF5.7(2)              ----------->HVH21            <------MYB83 --------->YAB1            --------->ANAC55(2)                                       ----------->GT1            <---------ANAC55(2)       --------->TOE1(2)           <---------ARR14(2)            <------MYB46(1)          <---------O2                 --------->GLK1(2)               ---           --------->MYB59           --------->O2                 --------->ARR14(2)             ----           --------->MYB46(2)        --------->TGA1a       ---------->DOF2                      -----       <------ZmHOX2a(1) ----------->GT1      --------->ATHB12   <---------GLK1(2)             ------     <---------TOE1(2)--------->MYB52(2)     <-------TEIL <---------AHL20(2)              ----------- xxxxxxxxxxxxsmallRNA(si3)           =================================bZIP_DOF        ---------->DOF2 ----->AHL20(2)--------->MYB52(1)    <---------TGA1a      --------->AHL20(2)          --------->MYB52(1)   aatatagtaggattaggtaacggttaattgtaatttcaaacgtgagattcattgtgcaaattaaagagaatctagtaaaaaataaaactaaagggtaaaa  8354600                    >>>>>>>>>>>>>>>>>LFY                    <------ZmHOX2a(2)                         <---------GLK1(1)                   --------->ARR11(3)    --------->GLK1(2)    --------->CCA1(2)       ----------->TBP      <---------ZAT18           --------->ICU4   --------->YAB1       <---------YAB1<-------TEIL ---------->DOF2 <---------YAB1      --------->KAN4(1)     --------->YAB1--------->ARR14(2)    <---------ARR14(2)  --------->ARR11(3) --------->AHL20(2)<---------ARR14(2)    --------->ARR14(2)  <---------ARR14(2) -------->GT1      <---------ARR11(3)    <-----------ARR10   --------->ARR14(2) ------->GT1       --------->AGP1--------->AHL20(2)  <---------TOE2(3)<---------KAN4(1)             < ---->DAG2     --------->CCA1(2) <---------AHL20(2) ---------->DOF2  <---------KAN4(2)       ------>ZmHOX2a(1) ---->DOF2---------->DOF2   ------------>CBF ----------->GT1 --------->ARR11(1)  ------------>CBF   - >GT1--------->AHL20(2)<------------CBF <---------GLK1(2)  ----------->ARR10  <-----------TGA1   <---   agttaaattataaaaagataagatccattgtgcaattaaagagaatctagttattaaagattagatatgcgaataatcgtcgtcacaatctcttcctcat  8354700                                                                                             <-------                                                                                          <---------MYB52(1)                        <---------YAB1                                         <------MYB83 ---------                      <---------AHL20(2)           <---------SPL7              <------MYB46(1)                     --------->AHL20(2)           <---------DEAR3(2)           <---------MYB46(3)  *TSS               <---------AHL20(2)  ------->TEIL--------->SPL7          <--------P  <-------GAMYB ---------AHL20(2)<---------AHL20(2)     <---------ARR14(2)        --------->ANAC58     ------>ZmHOX2a(2) -------->AHL20(2)--------->AHL20(2)     --------->ARR14(2)        --------->ANAC58     <---------MYB46(3) ------ICU4      <---------AHL20(2)     <---------CCA1(2)     --------->ANAC46<---------AtMYB61   atttatttctctggtcttatttatttattaataggcctctctgaatcttcttcggtacgagtatgagccacgatagagagttggtttcgatcgttagggg  8354800                                             <---------ALFIN1                                          --------->ANAC58                                          --------->ANAC46                                        --------->ANAC58                                        --------->ANAC58                                     --------->LBD16                                    --------->RAP2.3(2)                                    --------->RAP2.6(2)                                    --------->DEAR3(1)                                  <---------ANAC55(2)                                    --------->RRTF1(2)                       --------->DEAR3(1)                                   --------->RAP2.3(1)                       --------->MYB46(3)     -                                   --------->ATERF1(1)                     --------->MYB52(1)       -                                   --------->ANAC46                       <---------ALFIN1     <-----                                  --------->LBD16                      ------->GAMYB    --------->ANAC46                                  ------>NtERF2                       <---------MYB111(2)     -------                                  --------->At4g35610       --------->At5g28300    --------->ANAC58--                                  <---------ATERF1(1)      --------->RAP2.3(2)     --------->bZIP60(2)                    <-------GAMYB--------->ANAC46          --------->RAP2.6(2)--------->ORA47(1) <---                   --------->MYB52(2)------>NtERF2      --------->DEAR3(1)------->GAMYB --------->ANAC58                   --------->MYB55(2)<------NtERF2     --------->DEAR3(2) --------->AtMYB61   -------                   <---------MYB46(3)--------->At4g35610--------->ANAC46 --------->MYB46(3)  <-------      <---------WRKY38(1)        --------->DEAR3(1)    --------->MYB46(3)<---------MYB52(2)  --------      <---------WRKY12          <---------LBD16      <---------DOF5.7(2)-------->P --------->ANAC58<-     <<<<<<<<<<WRKY38 --------->WRKY12<---------ALFIN1<---------At5g28300<---------MYB55(2)--------->MYB52(1)     <<<<<<<<<<WRKY26 --------->WRKY38(1) --------->ANAC58--------->RAP2.3(1)--------->DREB2C(2)<----     <<<<<<<<<<WRKY43<---------MYB52(1) <---------ALFIN1------->GAMYB <---------MYB55(2)--------->ANAC58 --ANAC46         <-------TEIL--------->ARR14(2)   --------->DOF5.7(2)--------->MYB46(3)--------->ANAC55(2) >MYB52(2)----------->HVH21<---------ALFIN1  --------->AtMYB61   --------->TOE2(3)<------NtERF2<-----   tattttggtcaattgacatgttcgttggcccatctccgccgcacacaccactcgttaaccgccgtaacatcaacaaccaccggcctcgtaacgcaaccgt  8354900      <---------DAG2      <----------DOF2 -------->DEAR3(1) -------->AtMYB61 ------TGA1 -->ANAC46----------->RAV1(2) <---------DEAR3(2) ------->At4g35610          <------NtERF2 ------ALFIN1               ------>NtERF2                                                       <---- >GAMYB   --------->ANAC55(2)<---------DEAR3(1)                                            --------->GLK1(2) -----AtMYB77             <---------DEAR3(1)           <---------At4g35610                --------->ARR14(2) ->MYB46(3)              <---------LBD16           <-----------HVH21                      <---------GLK1(2) --------At4g35610     ------>ZmHOX2a(1)       ------>ZmHOX2a(1)                          <---------ARR14(2) -----MYB52(1)     <-----------GT1       <---------DAG2--------->At4g35610              ----------->ARR10 ------HVH21   <---------RVE1(1)         <----------DOF2    ------>ZmHOX2a(1)    ------>ZmHOX2a(1)   cacctccgctttacctgatattttcctcgcggcggtctctctccttttcctctggtcatctcctaaacctctagtctctcttcctccgaacagattctct  8355000                                                           ------>ZmHOX2a(1)                                                          <---------ALFIN1                                                        ------>ZmHOX2a(1)                                                       <---------ALFIN1                                                     ------>ZmHOX2a(1)                                              =================HOX2a_HOX2a                                              ====================HOX2a_HOX2a                                              =======================HOX2a_HOX2a                                              ==========================HOX2a_HOX2a                                              ------>ZmHOX2a(2)                                             ========================HOX2a_HOX2a                                             =====================HOX2a_HOX2a                        <-----------HVH21    ==================HOX2a_HOX2a                       --------->WOX13(1)    ===============HOX2a_HOX2a                     ====================================HOX2a_HOX2a                     <------ZmHOX2a(2)       <------ZmHOX2a(2)                    <---------ARR14(2)       --------->GLK1(1)                 <------NtERF2               <---------GLK1(1)                <-----------HVH21           <-----------ARR10                ------>NtERF2      <-----------HVH21<xxxxxxxxxxxxxxxxsmallRNA(se3)               --------->DEAR3(1) --------->O2==============HOX2a_HOX2a            --------->ANAC46  ------>NtERF2 --------->ARR14(2)           =================HOX2a_HOX2a     <---------ARR14(2)   ------>ZmHOX2a(1)       <---------ARR14(2)    --------->ANAC46===========================HOX2a_HOX2a       --------->ARR14(2) <---------ALFIN1--------->DEAR3(1)  ------>ZmHOX2a(1)                     < --------------------->WRI1  --------->DREB2C(2)    <---------ALFIN1                  ------>ZmHOX2a(1) ------DOF2------>ZmHOX2a(1) --------->DEAR3(1)   ------>ZmHOX2a(1)--------->ANAC46  --------->TOE2(3)   ttccctctaaatcctcgccgtcgatccatcaccgccatgtctcgccgatctcctcctcctcctcctcctactcaacgcttcgctaatcctcaatctctct  8355100                                                                                                   <-                                                                                                 <---                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              -------                             <-------TEIL             <---------LBD16                         -------                       ------>MYB83  --------->DEAR3(1)--------->LBD16 --------->YAB1  <<<<<<<ZML2--- ---------MYB52(1)     ------>MYB46(1)------>NtERF2  <---------LBD16  <-------TEIL ------------------   ccgattggctcgaatcgcgattaccttccgattcattcgccgcttggggagtcaaaccgggaaccaaaaacgttcataacctctggctagaactctccga  8355200  Previous    Next  AGI:  At5g24460.1    Description:  hydrolase. similar to unnamed protein product [Vitis vinifera] (GB:CAO48568.1); contains InterPro domain NUDIX; (InterPro:IPR015797) Range:  from: 8354702    to: 8355877    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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