Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------AHL20(2)                                            --------->AHL20(2)                   --------->YAB1           <---------ICU4             --------->ZAT6      ------>MYB83          <----------DOF2        ------>MYB46(1)    <---------------AtSPL8     --------->TOE1(2)                                ---------->DOF2    --------------->AtSPL8     --------->TOE2(2)                               <---------MYB52(1)    <---------------AtSPL3    <-----------------AGL1  --------->YAB1      --------->MYB52(1)    --------------->AtSPL3  <-----------GT1<---------ATHB12               -------->P             ----  --------->ICU4 --------->MYB52(1)        --------->ICU4               ------>ZmHOX2a(2)        ---- >GT1   ------->TEIL  <---------GLK1(2)  --------->WOX13(1)        <---------WOX13(1)          <-----   agcgatgatgtactttcactaacagaattgttacctacgatggcaattaataccaaaaataaacgagagattgatctaccggttaagcaggtttgtgtcc  8265300                      <---------ATHB12                    --------->WOX13(1)               ------>ZmHOX2a(1)              <---------MYB59           --------->ARR14(2)           <---------ARR14(2)                 <----------ID1           --------->ARR11(3)<---------------AtSPL8                           >>>>>>>>>>WRKY6           <---------ARR11(3)<---------------AtSPL3                           >>>>>>>>>>WRKY11        --------->MYB59      --------------->AtSPL8                          --------->WRKY38(1)    <---------ICU4--------->MYB46(3)      <---------AHL20(2)                 --------->WRKY45 ------->GT1 ------>ZmHOX2a(2)            --------->AHL20(2)         ----------->HVH21 ----->LBD16<------ZmHOX2a(2)<---------ZAT6 ---------->DOF2    --------->ANAC58        ------->TEIL ----LBD16<------ZmHOX2a(1)  --------------->AtSPL3            --------->ANAC58    <---------TOE2(3)   ggttaaaaattaggatcctaaccaattagtagaggtaccaaaaattaaaagacaaaaaaacatgtaagaaactgacaagttgactaatgtaccttgagct  8265400                                                               <---------ATERF1(1)                                                            <---------ATERF1(1)                                                          <------NtERF2                                                       <------NtERF2                                                       --------->DEAR3(2)                                                       --------->ATERF1(1)                                                       --------->RAP2.3(1)                                                      ------>NtERF2                                                      <---------ATERF1(1)                                                     <---------ARR14(2)                                                    --------->ATERF1(1)                                                   <---------ATERF1(1)                                                  --------->DEAR3(1)                                                 --------->RAP2.3(1)                                                 <---------LBD16--------->ATERF1(1)                                                 <------NtERF2 <---------At4g35610                                                 --------->ATERF1(1)                                                <---------RAP2.3(1)                                                <---------ERF1 --------->At4g35610                                                <---------RRTF1(1)------>NtERF2                                                <---------RAP2.6(1)                                                <---------ATERF1(1)<------NtERF2                                                ------>NtERF2--------->ATERF1(1)                                               <---------DEAR3(1)--------->RAP2.6(2)                                               --------->DEAR3(1)--------->RAP2.3(2)                                              --------->RAP2.6(1)--------->RAP2.3(3)                                              --------->ATERF1(1)--------->ATERF1(2)                                              --------->RAP2.3(1)<---------ATERF1(2)                                              --------->RRTF1(1)--------->RAP2.3(1)         <---------YAB1                       --------->ERF1<---------At4g35610       --------->YAB1                        <---------DEAR4(2)------>NtERF2       <---------ICU4                        <---------ATERF1(1)--------->ORA47(2)       <--------HAHB4                       <---------DEAR3(1)--------->DEAR3(1)      <---------ATHB12                   <---------WRKY18(1)--------->At4g35610      --------->ICU4                    --------->WRKY38(1)<---------DEAR3(1)    --------->WOX13(1)                  --------->WRKY12--------->RAP2.3(2)   <-------TEIL                         --------->WRKY45--------->DEAR3(1)                <------NtERF2  <------ZmHOX2a(2)                     ----------->HVH21<-----------HVH21          <---------LBD16  ====================HOX2a_HOX2a    <---------ANAC46--------->ARR14(2)         --------->GLK1(2)  <- <---------ARR11(3)               <---------AtMYB61--------->LBD16<---------RAP2.6(3)   <---------ANAC46 --------->ARR11(3)               <---------DEAR3(1)<------NtERF2--------->DEAR3(1)<---------LBD16<-- --------->AGP1------>ZmHOX2a(1)  --------->ALFIN1<---------DEAR3(1)       ------>ZmHOX2a(2)      ---   tgagatccatcattatcctcttccaactctatctcggtggtgttgaccggcgccggagccgtcgctgccgccttggatcgaaattctcgggcgggaacat  8265500         <---------ARR11(1)        ------>MYB46(1)                     --------->At4g35610        ------>MYB83              ------->GAMYB      <---------MYB59            --------->MYB46(3)   <-----------GT1              -------->P  <---------At4g35610 <----------DOF2               --------->WOX13(1) --------YAB1                <------ZmHOX2a(2)                         ------>ZmHOX2a(1) -------ARR11(3)            --------->ARR11(3)                 <-----------GT1            <---------ANAC55(2) ------>ARR11(3)            <---------ARR11(3)            <----------DOF2            ----------->GT1<   tatctttaccaaatctatagctctcaagaagatcaaccaaaaattcagcatcaacgatttctttatctccgtccttcaattcggacaaggttacatgaac  8265600                                                                                          --------->ATHB12                                                                                         <---------YAB1          <---------DAG2                                                               --------->YAB1       <-----------GT1                                             <---------YAB1   <---------RVE1(1)  <---------MYB46(3)                        >>>>>>>>>>>>>>>>>LFY--------->ICU4      <---------CCA1(1)  <------MYB83                       --------->GLK1(2)          <---------YAB1     --------->ARR11(3)  <------MYB46(1)                    ------->TEIL        ---------->DOF2           <---------ARR11(3) <---------AtMYB61   --------->WOX13(1) <---------YAB1<----------DOF2     <---------TOE2(3) --------P<----------DOF2         --------->ICU4<---------TOE1(2)<---------ICU4 <------ZmHOX2a(1)   tggttggtttgacttttccatatcaatccctatgtaatgaatctgattccaatgttctttaaagtgattatgagttaatgaaggagatattatgatttgt  8265700                                                                                                   <-                                                                    <---------ANAC58          <------                                      <---------AHL20(2)            <---------ANAC58   ==============                                 <---------AHL20(2)              --------->YAB1        <----------DOF2                                --------->AHL20(2)               -------->HAHB4       ------>ZmHOX2a(2)                                <---------AHL20(2)               <---------ICU4     <---------ARR11(3)                         ---------->ID1                         --------->ICU4      --------->ARR11(3)                        <-----------GT1                       <---------ICU4 <---------ATHB12 <------                    <----------DOF2   --------->AHL20(2)     ------>ZmHOX2a(1)--------->YAB1<--------            <----------DOF2<----------DOF2                   ================================HOX2a_HOX2a           <------------------------ANAC81  *TSS            <---------MYB59--------->WOX13(1) -------     <------------------------ANAC81 --------->AHL20(2)<---------MYB46(3)------------>CBF --------->AHL20(2)   gagtctctctctctcttttcttcttttttcttttttaaatttaaaaaaaaaacacagttgttcctaattatcgtgtccaatcatatgatcttttatatat  8265800               --------->O2<-------PIF5                                                     <--------    --------->YAB1    --------->ANAC58                                                      --------- ------TEIL    <---------O2------->PIF5                                          <------MYB83 ---AHL20(2)   <---------TGA1a                           <----------DOF2         <------MYB46(1)<---- ========================bZIP_DOF         --------->YAB1 <---------DAG2         <---------AtMYB61 -----TBP      --------->TGA1a  ----------->GT1         <---------YAB1   --------->ICU4  ----------->GT1 ---TBP--------->YAB1 --------->ANAC58    --------->ANAC46         --------->MYB59      --------->ICU4 -->AHL20(2)--------->TOE1(2)  ----------->GT1     <------ZmHOX2a(1)----------->GT1 <-----------HVH21   atacataaataatacccacgagggaagcacgaggggttaaatattcgtaacgaggattacttttggattttggtaattagggaaggtgtcatagttaatt  8265900                                                         <---------ANAC46        <---------AHL20(2)                            <---------ANAC58        --------->AHL20(2)                            <---------ANAC46 --------->ANAC58                                     <---------ANAC58                   <---------ARR14(2) --------->ANAC58                               --------->AHL20(1)                       --------->ARR14(2) -AHL20(2)               <-----------HVH21      --------->AHL20(2)                   <---------ICU4 >AHL20(2)           <---------AHL20(1)         <---------AHL20(2)                  --------->ICU4 -----ICU4    ----------->GT1                  --------->AHL20(2)          <----------DOF2   agcactctatttaaacatgttaatatatgtcagtttcaaaacaaaaaaaaaaaattgtgtggtatagtatatgtcttctttttgtcatcagtatatgtca  8266000                                                                            <---------YAB1                                              --------->AHL20(1)            --------->ICU4                                              <---------AHL20(1)          --------->YAB1                                     ----------->GT1                     --------->ICU4                                    <---------ATHB12                 <-------TEIL                  --------->HSFB2a(2)-------->HAHB4                  --------->ZAT18<---------AHL20(2)                  <---------HSFB2a(2)--------->ATHB12            --------->DAG2     --------->AHL20(2)            <---------TOE1(3)       --------->ICU4             ---------->DOF2   <---------AHL20(2)            <---------TOE2(3)   <---------AHL20(2)           --------->ANAC58   --------->AHL20(2)            --------->DAG2      --------->AHL20(2)           --------->ANAC46   <---------AHL20(2)       ------>ZmHOX2a(2)  --------->ICU4--------->AHL20(2)   --------->ANAC58--------->ATHB12    <---   tgaaattgatccataaggttttagaaaaatgattttaaatgattaaaaaatattagaagtaatacgaaaggtgcaatattgattaaataaatacaaactg  8266100                         <-----------GT1                     <---------AHL20(1)                     <---------AHL20(2)                     --------->AHL20(1)                     --------->AHL20(2)             <---------ANAC55(2)                                                                -----             --------->ANAC55(2)                                                               <-----             --------->ANAC55(1)                                                           <---------bZIP60(2)             ----------->GT1                                                --------->YAB1 <---------ANAC46             --------->ANAC58                    ----------->GT1   <---------ZAT18    <---------ICU4             --------->ANAC46                   <---------YAB1     <---------WRKY38(1)--------->YAB1      --------->YAB1--------->AHL20(2)        <---------ANAC55(2)  <---------WRKY12  --------->ICU4     <---------YAB1 <---------AHL20(2)        --------->ANAC55(2)  <---------WRKY45--------->YAB1   - ------YAB1  --------->ANAC58           ------->TEIL --------->AHL20(2)  <----------DOF2----------->TGA1   tgatagtatgataccacgtaaaataaattactacagaaaatgaatatcacatgataaaaatactagtagtcaactctttaataactcataatgacgagga  8266200  Previous    Next  AGI:  At5g24290.1    Description:  integral membrane family protein. similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT4G27870.1); similar to At5g24290-like protein [Arabidopsis lyrata] (GB:AAZ66425.1); contains InterPro domain Protein of unknown function DUF125, transmembrane (InterPro:IPR008217) Range:  from: 8263135    to: 8265744    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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