Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <------MYB83                                <------MYB46(1)                               <---------TOE1(2)                            <---------TOE2(3)                        <---------AHL20(2)                                 --------->YAB1                        --------->AHL20(2)                              --------->YAB1                       --------->AHL20(1)                            <----------DOF2                       <---------AHL20(2)                        <-----------GT1----------->GT1 -------AHL20(2)       <---------AHL20(1)                       <---------AHL20(2) ------>AHL20(2)       --------->AHL20(2)        <XXXXXXXXXXXXXXXXXXXXXMIR850--------->ICU4   ttaaacattgactctattgatagaatttatttgtaggttttgaaatggttttgttgaagtttggattttatcttttataatgttgaaaaatgaaaacaaa  8151500                       --------->AHL20(2)                       <---------AHL20(2)                       --------->AHL20(1)          --------->ATHB51           <-----------GT1                                       --------->ANAC55(2)          -------->ATHB1           <---------AHL20(2)          ----------->GT1             <---------ANAC55(2)          --------->ATHB12      ------->TEIL                  <---------TOE1(3)          <-----------GT1         <---------YAB1--------->ARR11(3)                     <---------TOE2(3)       --------->YAB1     <---------ANAC58  <---------ARR11(3)              --------->ARR11(3)            <---------YAB1     --------->ANAC55(2)     <---------YAB1          <---------TOE2(3)               --------->ICU4<-     <---------ANAC55(2)  <---------AHL20(2)    --------->GLK1(2)      ----------->GT1<---------ICU4     <---------ANAC58  <---------AHL20(1)       <---------ARR11(3)    <---------------AtSPL8  -------     <---------ANAC46 --------->AHL20(2)----------->RAV1(1)<---------YAB1        ----------->GT1 <---   tgtggtttcgtattattgaaacaaatatattatgaattttaacaacacaaaatctaagattatgaaggtaaaatagtacaaattggtataattacgaatt  8151600                                   --------->MYB52(1)                                  --------->MYB55(1)                                  ------->GAMYB                                 <---------MYB46(2)                                 <---------MYB111(1)                                 <---------MYB111(2)                                 <---------MYB55(2)                                 --------->MYB46(3)                            --------->ANAC58                            --------->ANAC58                 <---------------AGL15                     <---------YAB1            ----------->GT1                 --------------->AGL15                   --------->YAB1         <--------ATHB1                <-----------------AGL2                  <---------ATHB51        --------->YAB1                ----------------->AGL2          <---------------AtSPL8          <------------ATHB5 --------AtLEC2 ----------------->AGL3         --------->DAG2                  --------->ICU4 >TEIL     --------->AHL20(2)    <---------MYB52(2)     --------->ICU4         <---------ATHB12 --------GT1    <-----------------AGL3        ---------->DOF2                  <---------ATHB51   tacatggccgtgataaattctaaaattagtatgcaactaccgaaaacaaaaaggaacaattatgtttttggattaatggcaataatagggagaataatgt  8151700                                                       --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58                                                    --------->ZAT14                                                    <---------REM1(2)                               <   --------->ZAT2----------->GT1   <-----------GT1  <---------ZAT14                     --------->YAB1   <---------ZAT2--------->At4g35610       <----------DOF2                        <-----------GT1   -   gtccaagctggacacaagaagctaaaaaacagcctaataacctctcttttcgactacacacaatttgaaacaatagcagttttttcacattcacaagttt  8151800                          <-----------RAV1(1)                       --------->ATHB12                       <--------ATHB1                       <---------ICU4                       --------->YAB1                          --------->WRKY38(1)           --------                       --------->ATHB51                        <---------ETT(2)    <------------CBF                       -------->ATHB1                      --------->LBD16        <---------ICU4                      <---------YAB1                      <---------ANAC58        <--------ATHB1                      <---------ATHB12                    <---------ANAC58        -------->HAHB4                      --------->ICU4                     <---------LBD16          --------->ATHB51                      <---------ATHB51                --------->CCA1(2)          <---------YAB1              --------->ANAC58                        <---------GLK1(1)          <---------ATHB51              --------->ANAC58                        --------->GLK1(1)          --------->ICU4            ---------->DOF2 --------->ALFIN1         <---------ARR11(3)          --------->AHL20(2)          <---------HSFB2a(2)       --------->ICU4   --------->ARR11(3)    ----------->GT1   <-------          --------->HSFB2a(2)  <---------PCF2        --------->ARR14(2) ----------->GT1      <-------         ----------------->AG  ----------->GT1       <---------ARR14(2)--------->DAG2        -------- ---------GLK1(1)   --------->WOX13(1)            --------->LBD16     ---------->DOF2   ------------>CBF -------->GLK1(1)  ------------>ATHB5       <---------MYB46(3) --------->ETT(2)  <---------AHL20(2)   cgatttccatttccaaaagcatcaattattgtggggcaaaaatgagttgttccgagatatgcgggtcgaccataaagtagaaaataattgttcaataaaa  8151900       --------->GLK1(2)    --------->TOE2(3)      <---------GLK1(2)  <-----------GT1  ---------->DOF2    <---------YAB1                        <------------------------ANAC81 ->AHL20(1)     <---------ICU4                         <----------DOF2           ------>ZmHOX2a(1) --AHL20(1)    <---------YAB1                        <------------------------ANAC81    ------------- --AHL20(2)    --------->ICU4                     <----------DOF2   <----------DOF2     <----------DOF2 ->AHL20(2)  --------->YAB1*TSS            ------>NtERF2  <---------YAB1      <-----------GT1   tgccaaaagaatctctcattattctcattacctcatctatcgctctgcctagcttttcttttgatttcttctttttcattttcctctcttctttgttctt  8152000                                                                                                    <                                                        ---------->DOF2                             -                                                 <----------DOF2                                    <                                                 --------->TOE1(3)                  <---------KAN4(2)                                                 --------->TOE2(3)                <------ZmHOX2a(1) <            ------>ZmHOX2a(1)                 <---------ARR11(3)                 ----------->GT1   -- -------->WRI1                                --------->ARR11(3)               <------ZmHOX2a(1) <---   ccctctctaaaatccttctcccaaaaatcaaggagttgagagagggaagaactttaacaaaagaatttaagaactgaagaaggaggaataaacatcgaaa  8152100                                                                                               <-----                                                                                            <--------                                                                                   --------->LBD16                                                                                  --------->ANAC46                                                                                 <---------LBD16 ----                                                                               --------->ARR14(2)<---                                                                        <-------MYC2        ---------                                                                        ------->MYC2       ------>ZmHOX2a(1)                                                                        ------->PIF5     ----------->RAV1(2)            <----------DOF2                                             <-------PIF4   <---------ARR14(2) ---------ANAC46                                                        <-------PIF5   --------->ARR14(2) -------->ETT(1)                                                        ------->PIF4  --------->At4g35610 ---------ANAC58       --------->HSFC1(2)        --------->ANAC46       ------->MYC3  --------->ZAT2 ---------ANAC58       --------->HSFB2a(1)       <-----------GT1        <-------MYC3  <---------At4g35610 ------->ALFIN1        <---------HSFC1(2)      <-----------GT1          <-------MYC4  <---------ZAT2- --------RAV1(1)  <---------LBD16      ----------->GT1   <-----------RAV1(1)   <---------ARR14(2)----   tgtcgggctcgaggcttttcttcggagtttctacaattgtatcgataattttcgccattttgttgccgatggcacatgctcaatccgcagctcctgctcc  8152200                                  <---------YAB1                             --------->YAB1                  <-------GAMYB --------->YAB1         ----------->HVH21   <---------ICU4       --------->ANAC46     <---------YAB1     ---------->DOF2      --------->YAB1                                            --------->TOE2(3)     --------->MYB46(3)  <---------AHL20(2)                                       <---------ARR11(3) ----LBD16        <---------At4g35610  ----------->GT1                            --------->ARR11(3) -ZAT2 --------->ANAC58  --------->AHL20(2)                                       <---------ARR14(2) -->NtERF2--------->MYB52(1)--------->ICU4     <---------ZAT14         <---------At4g35610 ------ATERF1(1) --------->MYB52(2)   <---------ATHB12   <---------ANAC58        --------->RVE1(1) >ZAT2 --------->ANAC58  <---------YAB1<---------MYB46(3)<---------ANAC46  ----------->GT1 ----->NtERF2 --------->At5g28300--------->TOE2(3)       <---------ANAC58  <---------ANAC46 ----->LBD16<---------DEAR3(1) <---------YAB1  --------->ZAT14         --------->At4g35610   ggctccaacaagcgacggtgagttgatataattatcatcaatggttaactacagaggtttcttgaaaattttcagatgtgtgaatatcttaaatgtctct  8152300                                                                ----------->GT1                                                        <---------AHL20(2)                                                        --------->AHL20(2)                                                     --------->YAB1                                                   --------->AHL20(2)                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                    <---------DAG2--------->CCA1(2)<---------AHL20(2)       ------->TEIL   <-------TEIL        ----------->GT1     --------->YAB1---------->DOF2                 <---------ATHB12  --------->AtLEC2 --------->ARR11(3)<----------DOF2<---------YAB1 --------->AHL20(2)--------->MYB46(3)   atacatgcatgctcacaaaattatctagttaatctatgccttttgtcataagatataataaaagagtagttaattagttatctcttaaccaatgaatatg  8152400  Previous    Next  AGI:  At5g24105.1    Description:  AGP41. similar to AGP16 (ARABINOGALACTAN PROTEIN 16) [Arabidopsis thaliana] (TAIR:AT2G46330.1); similar to unknown [Populus trichocarpa] (GB:ABK93766.1); contains InterPro domain Protein of unknown function DUF1070 (InterPro:IPR009424) Range:  from: 8151927    to: 8152870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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