Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                       --------->YAB1                                                                                       -------->ATHB1                                                                                       --------->ATHB12         <----------DOF2                                                               <---------ICU4        <---------ICU4                                                                <---------ATHB12      --------->GLK1(2)                       <---------MYB52(1)                      --------->ICU4     --------->YAB1                          <---------At4g35610                      <---------YAB1    --------->ICU4                           --------->At4g35610                    <---------ICU4  --------->YAB1      ----------->GT1     <---------ATHB12                          --------->YAB1 --------->GT1       --------->MYB59--------->ANAC58                               --------->ICU4---- -------ICU4      --------->GLK1(2) --------->ANAC58                             --------->YAB1<----- ----->ICU4  <---------TOE2(3)----------->HVH21   <---------WOX13(1)            <---------AHL20(2)   tcagtaataatctttaagaaaatcaggtatatttgacgacgctaatcagttgattaatagaaacatattttggcagaagtttttaataatcattgaacca  8011200                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                  ---                                                                                                 <---                 <----------DOF2                                                                 ----              --------->GLK1(2)                                          --------->TOE1(3)     ------       ----------->GT1<-------GAMYB                         <---------ANAC46                   <----- -->MYB46(1) --------->YAB1              --------->ANAC58----------->HVH21              <---------ANAC58 -->MYB83   --------->ICU4               --------->ANAC58<---------DEAR3(1)             <---------ANAC58 ----MYB59--------->YAB1           <---------ARR11(3)   --------->SPL7   --------->TOE2(3)     ------   aacttgagttagtaataatctttctgttgaaaaacaagatagtaagcaaattactagggacgacgggaacaatagccttagagtcttcttgcttctcctc  8011300                                                                       <-----------RAV1(2)                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                      <---------ZAT2        <------NtERF2                                              --------->At4g35610       --------->LBD16                                             --------->ZAT2      <---------ANAC46                                            ----------->RAV1(1)     <------NtERF2                                                =================RAV     ----------------->AGL1                                     --------->ZAT2     <---------LBD16                                            <---------At4g35610     --------->ATERF1(1)                                        <---------ZAT2    ------>NtERF2                                               --------->At4g35610   --------->ALFIN1                                       ----------->RAV1(2)                   <----   ----------->HVH21                                      --------->At4g35610                   -----  --------->ATERF1(1)                                     =================RAV                 <-----  <-------PIF5                     <-----------RAV1(2)    =======================RAV        <--------  ------->PIF5                     ===============================RAV --------->ZAT2       --------->MYB52(1) <---------At4g35610             =======================RAV    ----------->RAV1(1)       <---------HSFB2a(1) <---------DEAR3(2)              ----------->RAV1(1)      ====================RAV        --------->HSFB2a(1) <---------ATERF1(1)          --------->TCP16(1)         <---------ARR11(3)             --------->HSFC1(2) ---------ATERF1(2)           --------->TCP20           --------->REM1(1)               <---------HSFB2a(1) -------->ATERF1(2)        --------->ALFIN1           ----------->RAV1(1)               <---------HSFC1(2) ---------DEAR3(1)       <---------ANAC46             ================RAV            --------->LBD16 ---------DREB2C(2)      <------MYB46(1)              =============================RAV --------->ARR14(2) --->NtERF2              <------MYB83             <------ZmHOX2a(1)<---------At4g35610 <-----------ARR10 --------RAV1(1)        <---------DEAR3(1)    ------>ZmHOX2a(1)====================RAV <---------ARR14(2) ------->HVH21          --------->ALFIN1    ----------->RAV1(2)<XXXXXXXXXXXXXXXXXXXXMIR172C/D ------- >ZmHOX2a(1)            <---------AtMYB61   ===============================RAV     <---------LBD16 ----At4g35610    --------->MYB52(1)        ======================RAV----------->RAV1(1)--------->HSFB2a(1) --->At4g35610    <---------ARR14(2)        <---------LBD16  --------->At4g35610 <---------ALFIN1   tgccggtgccggagatggaagaacgggaggtggagccacaggcttctcctgaggagcaacatctgcagcagcagcaggtttctccaccggaacttccggt  8011400                                                                --------->REM1(1)                                                               <-------TEIL                                                            <------MYB83---------->DOF2                                                            <------MYB46(1)      <------MYB46(1)                                      --------->MYB46(2)      <---------MYB46(3)                                   --------------->AtSPL3      <------MYB83        <------------------------ANAC81  --------->MYB52(2)      <---------DEAR3(2)<-----------HVH21                  --------->MYB111(1)    <--------P  --------->ANAC58                           --------->MYB59--------->ICU4         <--- -------RAV1(1) --------->ANAC58                    --------->ICU4 --------->MYB46(3)          ------ ---->ALFIN1  <---------ALFIN1            ------>ZmHOX2a(1)--------------->AtSPL8              <----- ----MYB52(1)<---------REM1(2)        --------->ARR14(2)   <---------------AtSPL8---------->DOF2----- -LBD16    <---------ETT(1)           <---------ARR14(2) <---------MYB52(1)<---------ICU4 --------->YAB1 -->LBD16  ----------->HVH21        <---------DEAR3(2) <---------YAB1 <---------MYB52(2)--------->GLK1(2)   gttggagttggttccgacacggtctctgtcaccttcttcggttcctcttcagccatgatgttaggtacaacaactaaagattacaaagagaatcaaaatg  8011500                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                         <---------ARR11(3)  --------->ZAT14                                                                 --------->ZAT2 ------GLK1(2)                                                                    --------->At4g35610 --->ICU4                             <---------AHL20(2)          <---------AHL20(2)     --------->ARR11(3) ----YAB1                             --------->AHL20(2) <-----------GT1          <---------ZAT2 --->HAHB4 ----------->GT1----------->GT1                --------->MYB52(1)       <---------At4g35610   attctgaactctctggttatttaagagagagagaaaacaaaaaattgttttagagagattaactgtttttatttgaagaaactgagctggagatgtttgg  8011600                                                                 <---------------AGL15                                                      <---------AHL20(2)      <----------DOF2 -MYB83                                           <---------AHL20(2)        <---------YAB1        --- -MYB46(1)                                    --------->AHL20(2) <----------DOF2               <----- ---MYB46(3)                     --------->ANAC58<---------AHL20(1)        --------->ARR11(3)  ------ -->MYB59               --------->AHL20(2)    <-----------TBP    --------------->AGL15        <------ -->MYB111(1)         *TSS       --------->ANAC58--------->AHL20(1)<-----------TBP        <------ZmHOX2a(2) -->MYB111(2)        --------->YAB1         <----------DOF2   --------------->AGL15       ----------- -->MYB46(2)        <---------YAB1      <----------DOF2    <-----------GT1 <---------ARR11(3) -------   tagtgatgttctgtttctcgttgtcataaaatgactcgccttctttctttatatatttgattttcttctttttgtagtatctttgatgcacgatcaatga  8011700     <---------YAB1   --------->YAB1  <---------ATHB12 --------->CBF                                                 --------->MYB46(3) ---ATHB1                                            <-----------GT1                            ----- --->ATHB12             --------->AHL20(2)       <---------AHL20(2)                             <---- ---ATHB12              <---------AHL20(2)      --------->AHL20(1)                             <----- ->CBF        <----------DOF2                   <---------AHL20(1)                             ------ -->ICU4     <---------ICU4                    <---------AHL20(2)                           ---------   ttcaatgaccattaatctttagataatttataaaaaaactacatgttatatatatttacaattcaaccactaattgtcatattttttgtcaacttaaatt  8011800                                  ---------->DOF2        <---------REM1(1)       --------->AHL20(2) <---------ANAC55(2)       --------->ICU4 ----------->GT1      --------->ANAC55(2) --------->ANAC55(2)  --------->ANAC58 ---->AHL20(2)        <---------ANAC55(2) -----AHL20(2)        --------->ANAC58                                                 <------------- ----AHL20(2)      <---------MYB52(1)                                        --------->AHL20(2) --->AHL20(2)    --------->YAB1 <---------AHL20(2)                           <---------AHL20(2) >AHL20(2) ------->TEIL    <---------ATHB12     <---------ICU4              --------->AHL20(2)   aatatgtaacatgtagctatcgttacgaaatcatttaaaagggttctacataatttcttataagttttggtattcaaattaaaatgttttaagtacaagg  8011900                                                                                 <<<<<<<<<<AGL20                                                                                 <<<<<<<<<<AGL24                                                                                 <<<<<<<<<<AGL22                                                                              <---------------AGL15                                                                              --------------->AGL15                                                                             <-----------------AGL3                                                                             ----------------->AGL2                                                                             ----------------->AGL3                                                                           --------->ARR14(2)                                 <---------PCF2                            <---------ARR14(2)                                <------MYB46(1)                         --------->ANAC58            <                                <------MYB83                            --------->ANAC55(1)         -    ------->GAMYB               <---------DEAR3(2)   <---------TOE2(3)  --------->ANAC58          ---  --------->At4g35610         --------->ALFIN1       <---------TOE1(3)  --------->ANAC46      <------ZmHOX2a(1)  <---------At4g35610      <------ZmHOX2a(1)   ----------->GT1          --------->ANAC55(2) <-------- --AtSPL8            <---------YAB1  --------->TOE1(2)                 <---------LBD16 <------ZmHOX2a(1)   attcaactgcaaaatccataagtcttataggagtgggttccttcgaatgttgtttaaagtttagaaacacttacacggaaccatatttaggactaaggag  8012000                                                  --------->REM1(2)                                                  --------->ZAT14                                                  <---------ZAT14                              ------        --------->MYB52(2)                     <---------ANAC46                             <-------- ---------ARR14(2)                      <---------ANAC58                         ----------->GT1 -------->ARR14(2)                      <---------ANAC46                         --------->LBD16 -------->ARR10  <---------At4g35610    <---------ANAC58       --------->YAB1  <---------LBD16 ------ -TOE2(3)        --------->At4g35610--------->LBD16   <---------GLK1(2)      <-----------GT1---------   tagaaccggttcgctactcagcacaagtgccatcaaaccgggtcgtgttctgtgtagaatttcaaaaatagcatctaataaaccggataaatgggaacct  8012100  Previous    Next  AGI:  At5g23750.1    Description:  remorin family protein. similar to remorin family protein [Arabidopsis thaliana] (TAIR:AT3G48940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73187.1); contains InterPro domain Remorin, C-terminal region (InterPro:IPR005516); contains InterPro domain Remorin, N-terminal region (InterPro:IPR005518) Range:  from: 8009809    to: 8011622    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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