Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     -------->P                                  ------->GAMYB                                 <---------MYB111(2)                                 <---------MYB55(2)                            --------->ZAT14                                 --------->MYB46(3)                     <----------DOF2                         --------->O2                             <---------GLK1(2) -->ZmHOX2a(2)           --------->ANAC46                        <---------At4g35610 --ZmHOX2a(2)            --------->ANAC55(1)                     <---------HSFC1(2) ---->GLK1(1)            --------->ANAC58                        --------->HSFC1(2) ----AGP1                --------->ANAC58      --------->ARR11(3)--------->At4g35610 --->ARR11(3)          <---------ALFIN1 ----------->RAV1(1)   <---------At4g35610   <-----------GT1 ----ARR11(3)       ----------->HVH21------->GAMYB        --------->TOE1(3)    <---------ZAT14   ctctatgaacaacaccaagagagtgacacgcctcaacaaccccaacaatggtcttgataagcttagcagcttctctttcactgtaatgacctctcttcac  7952100                                                <-------MYC3      --------->ANAC58                                                ------->MYC3      --------->ANAC58                                                <-------MYC2     --------->SPL7                                                ------->MYC2   <---------SPL7                                    --------->YAB1            --------->TOE1(1)         --------->ALFIN1                     ------>ZmHOX2a(1)        ------->TEIL    --------->TOE2(1)    <---------WRKY12             ------->GAMYB---------->DOF2   <-------TEIL     ------>ZmHOX2a(1)     <---------WRKY38(1)            <---------MYB52(2)   --------->REM1(1)       <---------ZAT18    <---------REM1(2)   aattctatcaaacaactcacctccttcacaaagctccatcacaagatgcacgtttttggtgtcctcgtacgcactctctatacggacaacgttggggtat  7952200                      --------->GLK1(1)                      <---------GLK1(1)                     --------->ARR11(3)                                 <---------ANAC58                     <XXXXXXXXXXXXXXXXXXXXMIR2938                  <----------DOF2              -----                     <---------ARR14(2)                      --------->HSFC1(2)              <-------                     --------->ARR14(2)                      <---------HSFC1(2)<---------ARR14(2)                     <---------ARR11(3)                      --------->HSFB2a(1)          --------->ANAC58                     <---------AGP1                          --------->ZAT2    --------->ARR14(2)<---                    <---------CCA1(2)                        --------->At4g35610      --------->ANAC58                 <---------LBD16       <------NtERF2         <---------At4g35610      --------->ANAC46    --------->ANAC55(2)              <---------DEAR3(1)      <---------HSFB2a(1)      --------->ANAC58    <---------ANAC55(2)------>ZmHOX2a(2)               ---------->DOF2  <---------ANAC58  --------->ANAC58   tcagacaagtgatgcattatctggatctctctcagaacgtcgtcgtaatcttcttgacaaaggagcttccttttgggtatggatttgcaggcaagctttt  7952300                                                                ---------->DOF2                                                              --------->ANAC58                                    --------->ARR14(2)        --------->ANAC58                              <---------ARR14(2)         <---------WRKY18(1)                       ---------->DOF2                   >>>>>>>>>>WRKY26    <-----------------AGL2    --------->ARR14(2)         >>>>>>>>>>WRKY38    <-----------------AGL3 --------->ALFIN1              >>>>>>>>>>WRKY43 ------>HVH21         <------ZmHOX2a(1)                 --------->WRKY38(1) ---DOF2        <---------ZAT14     <---------ARR14(2)  ----------->HVH21 --------GT1    <-------TEIL<---------MYB46(3)      <------ZmHOX2a(1)                              <-   gacctgtctgtttatgggtacagaggaaagtggttccgaattggccttgtccaaggacttgaccaagaaagtaattgtcttcaacgtttttggtcttgta  7952400                                                                                <------ZmHOX2a(1)                                                                             --------->At4g35610                                                                          <---------At4g35610                           --------->ANAC58             <----------DOF2---------->DOF2                           --------->ANAC46             --------------------->WRI1                           --------->ANAC58      <---------AHL20(2)<---------ANAC58         ----------->RAV1(2)               <---------DAG2          <---------ANAC58          -------- -----ZmHOX2a(1)       <---------MYB46(3)  <----------DOF2         <---------ANAC46 >>>>>>>>>TBF1   aggaagaacccatctggttcttggtttgttcgccattcttgagagcttttttttatttctttgagggtttcgtttaagcagaggaagaagaagagaaact  7952500                   <---------ANAC58                   <---------ANAC58                   <---------ANAC46          --------->ANAC58        ---------->DOF2--------->HSFB2a(2)       <------ZmHOX2a(1)     <---------TOE2(3) <---------HSFB2a(2)                                           ----------->GT1 ->GLK1(2)--------->ANAC58         *TSS                                           <------ZmHOX2a(1)   gttgaatgaggaaagaaactgacttggagaaggcattgaagagagagagagagagagagagagagagagggaagtcaagagttaggagagaaataaaacc  7952600               --------->ATHB12             <---------WOX13(1)            <------------CBF           --------->ATHB12           <---------ICU4           -------->ATHB1       <----------DOF2           <--------ATHB1      <---------ANAC58         --------->ANAC46          --------->ICU4       <---------ANAC58      <---------ZAT18          <---------ATHB12<---------ICU4             --------->ETT(2)          <---------YAB1  --------->YAB1     <---------RVE1(1)       ------------>ATHB5 -------->HAHB4    <---------GLK1(2)                                      <-      ------------>CBF   <---------YAB1     --------->ARR11(3)              ----------->GT1    ------   aagttttggacaatgattgattagctaataatagctttccatttcagattttttgtccacatcaaatgaaaaaatgggaagtaaaacaaattccatgaat  7952700                                                                                      <<<<<<<<<<WRKY26                                                                                      <<<<<<<<<<WRKY38                                                                                      <<<<<<<<<<WRKY43                                                                                    ----------->GT1                                                                                    <------MYB46(1)                                            <---------AHL20(2)                      <------MYB83                                           --------->AHL20(2)                      --------->MYB59  -                                        -------->ATHB1                         <---------AHL20(2)   <                                        <--------HAHB4                    <---------AHL20(1)        -                           <---------WOX13(1)  <---------AHL20(2)         --------->AHL20(1)        <                         --------->ATHB12 <---------YAB1                 --------->AHL20(2)         -                        <-------TEIL    <---------ICU4               --------------->AGL15<---------ARR14(2)   <-----------GT1 --------->AHL20(2)   --------->ATHB51  <---------AHL20(2) --------->AHL20(2)     < ---------DOF2----------->GT1--------->YAB1<---------AHL20(2)        <---------------AGL15--------->ARR14(2) ->TEIL      <---------TOE2(3)         --------->ICU4     --------->AHL20(2) <---------AHL20(2)    --   gcttttaactgaatgaaggaaaaaaattcattgatagttgaattattaattagttgatatttttatattttctaaatatataaatttggtcaaatactca  7952800                                                                           --------->AHL20(2)                                                                          --------->AHL20(1)                                                                          <---------AHL20(2)          --------->ANAC55(2)                                             <---------AHL20(1)          ----------->GT1                                             --------->AHL20(2)          <---------ANAC55(2)                                         <---------AHL20(2)         --------->MYB59                                              --------->AHL20(1)     --------->WOX13(1)                                          --------->AHL20(2)   <---------AHL20(2)                                 <---------DAG2  <---------AHL20(1) -------->AHL20(1)                            <---------YAB1 <---------TOE2(3) ---------AHL20(1)                          <---------AHL20(2)----------->GT1 -------->AHL20(2)                         <---------YAB1    <---------TOE1(3)     <---------AHL20(2) ---------ARR11(3)                        <---------AHL20(2)---------->DOF2<---------AHL20(2) -------->ARR11(3)                    <---------AHL20(2)  <---------YAB1  --------->AHL20(2) ---------AHL20(2)                   <---------YAB1<-----------GT1   --------->AHL20(2) ------->AHL20(2)    --------->MYB52(1) <---------YAB1<----------DOF2<---------AHL20(2) --------->ANAC46   aatatattaatcaggtaatatactaccagagtccaaatttttatttttatttttaactttattaaagttaaataaatttaattgtttaataaggcacaat  7952900                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                              <---------AHL20(2)                                          --------->AHL20(2)                <---------TOE2(3)                                         <---------AHL20(2)                ---------->DOF2                                         <---------AHL20(1)               <---------AHL20(2)                                         --------->AHL20(2)               --------->AHL20(2)                                   <---------TOE2(3) --------->GLK1(1)<---------------AGL15      ----                           <-----------GT1<---------AHL20(2)          ===============================      --------------->AtSPL8  <----------DOF2 --------->AHL20(2)      --------------->AGL15      <---  --------->YAB1       <----------DOF2   --------->AHL20(1)     --------->ZAT14       <---------REM1(1)   gcattcaaaatgtacaatattgcctcttttaacttttaagaaataaaattatatgatatctaatagtatagactaattaaagaagtagttgtagcgatag  7953000  Previous    Next  AGI:  At5g23580.1    Description:  CDPK9 (CALCIUM-DEPENDENT PROTEIN KINASE 9); calmodulin-dependent protein kinase/ kinase. Identical to Calcium-dependent protein kinase 12 (CPK12) [Arabidopsis Thaliana] (GB:Q42396); similar to ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G35670.1); similar to CPK4 (calcium-dependent protein kinase 4), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G09570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43672.1); similar to calcium-dependent protein kinase 1 [Vicia faba] (GB:AAV28169.1); similar to calcium-dependent protein Range:  from: 7950205    to: 7952535    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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