Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ----------->RAV1(1)                                        --------->LBD16                                        --------------->AGL15                                        <---------------AGL15                                        ------>ZmHOX2a(1)                                      ========================RAV                                      <---------LBD16                                      ----------->RAV1(2)                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                   --------->GLK1(1)                                   --------->MYB46(3)                                   <---------GLK1(1)                                  ------>NtERF2                                  --------->ARR14(3)                                 --------->ANAC46                                  <---------ARR14(3)                           ------>ZmHOX2a(2)            <---------ARR14(2)    --------->ARR11(3)                           ======================            --------->ARR14(2)    <---------ARR14(2)                         --------->ARR11(3)            <---------MYB52(1)    --------->ARR14(2)                         <---------ARR11(3)           <---------MYB52(1)     <---------ARR11(3)                         <-----------ARR10 ------->DOF2          --------->ANAC58<-----------------AGL1          <---------GLK1(1)--------->AtMYB61 >AtLEC2  --------->LBD16     ---------->DOF2    <----------ID1      ------->GAMYB   <---------ALFIN1 >ANAC46<---------LBD16--------->ANAC58<-----------------AGL3    --------->MYB46(3) --------->MYB46(3)   caaagctccctccggttactcttgcaagaaatcaaagatctcctgaaaatggcaacaagaagagccaacaacgaaatctgatcttccccaccatcgtctt  7425100                                                                           --------->GLK1(2)                                                                           <---------ARR11(1)                                                                           ------->TEIL                                                                           <---------ARR14(2)      <-                                                                           --------->ARR14(2)    <---                                                                          <---------ARR14(1)    -----                <---------At4g35610                             <---------ARR11(3)            <------                <---------ZAT14--------->ARR11(3)               --------->ARR11(3)            <------    ------>ZmHOX2a(1)          <---------ARR14(2)      ---------->DOF2  ------>ZmHOX2a(2)<---------GLK1(1) ==========HOX2a_HOX2a        <---------CCA1(2) <---------TOE2(3)   <---------YAB1 --------->ZAT2<---   cttctcctccatcggtactgctccgtcttctcaaatcttgttcttcgattgaggcatgaaagtcaacatcttgatcgaatctagcaactgggtttctccg  7425200   <-----------HVH21 <---------AtMYB61 --------MYB46(3) ------MYB52(1)                          <---------ANAC58                       >>>>>>>>>TBF1 ---->LBD16                              ----------->GT1                  >>>>>>>>>TBF1 ---LBD16      --------->YAB1            <---------ANAC58              >>>>>>>>>TBF1 -----------AGL1                         <---------ANAC46   --------->ALFIN1 >>>>>>>>>TBF1  --------- ----GAMYB    <---------ATHB12---------->DOF2    ---------->DOF2 <------ZmHOX2a(1)     <---------YAB1   gttgtggtcagagctaatcaagagagtcgcattagagcgagaggcgtaagataaagaagaaggtgaaggagaagaagaagaagaagaagatgaatgagaa  7425300                       --------->ARR14(2)                       <---------ARR14(2)                       --------->ARR11(3)                       <---------ARR11(3)              ---------->DOF2                <---------GLK1(2)                              ---------           <---------TOE2(3)                 <---------ARR14(2)                           <---------ATHB12        <---------REM1(1)                    --------->ARR11(3)  <----------DOF2        --------->WOX13(1)      --------->At4g35610     <-----------HVH21      ---------->DOF2            --------->ATHB12   -- >YAB1<---------At4g35610  --------->ZAT14<-----------------AGL1 <---------DAG2<---------ATHB12  ----   gcgcttggagatgaaggaaagtgaagaacttcagtcatggcgcttcagattttggcaaaggaaacaacttttttggttcaaatcatttgtcaatgaaaga  7425400                                       --------->At4g35610                              --------->LBD16                             --------->ANAC46                                             --------->MYB59 ->DOF2                      --------->LBD16   <------ZmHOX2a(2)          --------->TOE1(3)        <- ------->DAG2               <---------LBD16   <---------ARR11(3)      *TSS--------->TOE2(3) <-------GAMYB ------>DOF2       ----------->GT1     <---------At4g35610  <---------MYB46(3)    --------->At4g35610   aaaggttttgaattgaaggaaatgtataaacccggaaatagagctcaagatcgaagattagattgttgattcaaaaccctaattagatgaattcggttgc  7425500                                              --------->AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(2)                    ----------->GT1                                     --------->AHL20(1)                --------->DAG2                                     <---------AHL20(1)               ---------->DOF2                                    <---------AHL20(2)        <---------WRKY18(1)                                    --------->AHL20(2)     <------------CBF<---------MYB46(3)                                 <---------ICU4<---------AHL20(2)--------------->AGL15             --------->MYB52(1) --------->ICU4<---------AHL20(2) <---------------AGL15   --------->AHL20(2)   <---------ATHB12       <-----------GT1 <---------AHL20(2) --------->WRKY38(1)         <---------AHL20(2) --------MYB52(2)      ----------->GT1    --------->AHL20(2) --------->WRKY12   <-----------GT1   cactaatgaacaaaaaaacagagttttgttactactaattaaatttaaataaatgactaaacattgaccataaaaagtggttaaaccatataaaaatagt  7425600                                                               <---------WOX13(1)                                                    <---------ANAC55(2)                                                    --------->ANAC55(2)                           <--                                                  <-----------GT1                                 ---                                               <---------MYB46(3)                                 ---                                              <---------WOX13(1)                                 ----                                           <---------YAB1    --------->ATHB12                <-------                   --------->ZAT6   <---------ARR14(2)    --------->YAB1                   <---------   <---------TOE2(3)         ---------->DOF2--------->ATHB12<---------YAB1     --------->ATHB12  <---   tgaataagataagttttggtaacacaaaaaaaaaagagaatactactgattgttacatatttatgattgattttagttaaactattggaggttttacaat  7425700              <---------ANAC55(2)                                                                  --              --------->ANAC55(2)                                                          <---------ANAC46          --------->TOE2(3)                           <-----------GT1                      <---------LBD16 -------AHL20(2)                                   <---------ICU4                         --------->ALFIN1 ------>AHL20(2)                                  --------->ICU4                      <---------ANAC58 ------>AHL20(1)              <------ZmHOX2a(1)  <---------TOE2(3)                    <---------ANAC46 ----->AHL20(2)              <----------ID1--------->AHL20(2)            <---------YAB1 <---------MYB52(1) --YAB1 <---------TOE2(3)    ----------->GT1  <---------AHL20(2)       --------->YAB1 <---------ANAC58 --GT1  <---------YAB1    ---------->DOF2  <---------AHL20(1)  --------->ICU4      <---------GLK1(1) ------AHL20(2)       <---------------AGL15--------->AHL20(1)  ------>ZmHOX2a(1)  <---------ARR14(2)   taaattagttaacattaagtattgatataaaaggataaacattgatatattaatgtttacaagtccttatcacttataaatgtggatttcgtttggggga  7425800                                    ----------->GT1             <---------YAB1    <---------------AGL15         <---------DAG2        =========================================MADS_MADS         <----------DOF2 <-------MYC2     --------->ZAT14     <-------MYC3                                      ------->MYC3     <---------ZAT18     ------->MYC2                                      <-------MYC3     <---------ZAT14     ------->MYC3                                --------->ARR14(2)       -------     --------->ARR14(2)<---------TOE1(2)                             <---------ARR14(2)  <-----------GT1 ------->GLK1(2)<---------YAB1 --------------->AGL15    --------------->AGL15   <-----------GT1   aaatcagtatactttatgatttttgcacgttttctaaaatgtgaaaccatgttatgttcttagattagtagtatccacgttttcacaaaatataccattc  7425900                                                                                            <--------                                                                                            <--------                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                             <------ZmHOX2a(2)                                                                        ---------->DOF2     <--------                                                               <-----------GT1  <---------TOE2(3)  <-                --------->ANAC55(2)                    --------->At4g35610  --------->ARR11(3)    --- -->AtLEC2      <---------ANAC55(2)  <---------MYB52(1)<---------At4g35610  <---------ARR11(3) <-----   aaacgcttgctctatagtacataatccctatgttgagccagtagttaagaagcattttgctgaatttactaaaacaaagatcaaggattttattgcgttt  7426000  Previous    Next  AGI:  At5g22400.1    Description:  rac GTPase activating protein, putative. similar to rac GTPase activating protein, putative [Arabidopsis thaliana] (TAIR:AT3G11490.1); similar to RhoGAP1 [Nicotiana tabacum] (GB:ABG85154.1); contains InterPro domain RhoGAP; (InterPro:IPR000198); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936) Range:  from: 7422719    to: 7425470    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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