Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ------>MYB83                                                                                 ------>MYB46(1)                                                                                ----------->RAV1(1)                                                                              --------->MYB46(3)                                                                           --------->TGA2(2)                                                                         --------->ANAC46                          ---------->DOF2                                --------->ANAC58                      --------->ANAC58                                   --------->bZIP60(1)                      --------->ANAC58                                   --------->bZIP60(2)                      --------->ANAC46                                   <---------TGA2(1)                      <---------ANAC55(2)                                <---------bZIP60(1)                      --------->ANAC55(2)                                ============================                     <-------TEIL                                        --------->ANAC58                    --------->CCA1(2)                                    --------->TGA1a                    --------->ARR14(1)                                   <---------TGA1a                   <---------GLK1(2)                                     --------->TGA2(1)                   --------->ARR14(2)                                   <-----------STF1         <---------ARR14(2)                                            <------ZmHOX2a(1)      -------     <-------TEIL  --------->ARR11(1)                               <---------------AtSPL3    <------   <-------MYC3    <---------ARR14(2)                      ========================bZIP_DOF  <-------   ------->MYC3  ----------->ARR10                         ---------->DOF2<-----------HVH21  --------   attcacatgcatatatagatagatacgcaaaagaaaaattgtatacagagagagagaagggaaaagagagagaggacgtcaccaacatattggcaatggt  7369900                                                                                    --------->ZAT2                                                                                    <---------ZAT2   ------->GAMYB                                                        <-------GAMYB ==========MYC_MYB                                                     <---------ANAC46          ---- -->ATHB12                                                          <---------GLK1(1)            ---- ---MYB46(3)     <---------HSFC1(2)                          <---------ARR14(2)     <---------At4g35610 --ATHB12        <---------HSFB2a(1)    ---------->DOF2      --------->ARR14(2)     --------->At4g35610 ->ICU4          --------->HSFC1(2) --------->ANAC46        <------ZmHOX2a(1)------->TEIL---------->DOF2   tgcaacggagattgagagaggcttcgatgggctcttctacgacaaagagaagaacatagagaggatttggatttcgttgaatctcgagctgaaaagacca  7370000                     ---------->DOF2               --------->GLK1(1)               <---------At4g35610                                                             <-----               --------->At4g35610                                                --------->ZAT2               <---------GLK1(1)                                                  <---------At4g35610               --------->ZAT2                                                     <---------ZAT2               <---------ZAT2  ------>MYB83                                       --------->At4g35610          <---------------------WRI1                         ---------->DOF2    <-----------RAV1(2) -->MYB46(1)--------->LBD16    ------>MYB46(1)           <---------HSFB2a(2) --------->At4g35610 -->MYB83 <---------LBD16    <---------MYB59             --------->HSFB2a(2) <---------At4g35610   acttcccattagaccggagctctcaaagtgaccaaactcaagtagtttagcgaggttatctcgaaaagacaactcgttcatctcagctggatgtccagac  7370100                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                     <-------TEIL                                                                                    --------->ARR14(1)                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                       <---------MYB46(3)                                                              <---------ANAC46     --------->ARR11(1)                                                         <-----------RAV1(1)       <---------GLK1(2)    --------->SPL7                              <----------DOF2        <---------DEAR3(2)--------->DEAR3(1)    ------->TEIL            <----------DOF2------>ZmHOX2a(1) <---------At4g35610 ----------->ARR10 ----GLK1(2)   --------->TOE2(3)  <---------ALFIN1      --------->ARR11(3)      --------->YAB1   ----   tctccgaacgtcttcagcctaaaaactctactttcccctctcttcctcttctttggaatatgttgctgatggtctgttcgaatcagattcgccatcgaat  7370200              ------>ZmHOX2a(2)                                        <---------MYB46(3)              ===========================HOX2a_HOX2a                   --------->MYB52(2)            <---------ARR11(3)                                --------->ATHB12       <<<<<<<<<<MYB80                                     --------->YAB1      <------MYB83                                        <---------AHL20(2)                       <-      <------MYB46(1)                        --------->ARR11(1)        ----------->GT1            *TSS   >>>>>>>>>SARD1                         <---------WOX13(1) <---------YAB1                   -------   >>>>>>>>>CBP60g                     <---------YAB1  --------->AHL20(1)                 ---------->DOF2 ----->YAB1 --------->ARR11(3)    <------ZmHOX2a(1)    <---------AHL20(1)    --------->YAB1--------->DAG2   cagaaatttggtttgatcttgagaagagagggaataggaatatgatagatttggatatatattatgatggggtttgttataagaagagaccgaaaagtgt  7370300                                      <---------TOE2(3)       <----------DOF2                        --------->CCA1(2)          ------------>CBF               --------->DAG2            <---------TOE2(3)      --------->ICU4 --------->ANAC58               ---------->DOF2 <------ZmHOX2a(1)     <---------ARR11(3)         --------->ANAC58            <----------ID1 --------TOE2(3)       --------->ARR11(3)<---------YAB1 <---------ICU4     ---------->DOF2 -->ALFIN1  <---------TOE1(3)   --------->ICU4<-----------HVH21         <---------YAB1         ------   tgaggaagtgtgttaagggtttagagatatagtagtcattaagatgatggtcacacaattagtgctttgtggtgatgaaaaggaaaagtgagtgagagaa  7370400                                                                                --------->TOE2(3)                                   <---------YAB1                         ----------->GT1                 --------->At5g28300--------->ATHB12 <------MYB83 <-------TEIL  --------->TOE1(3)                ----------->GT1   >>>>>>>>>>>>>>>>>LFY--------->ARR11(3)<---------ANAC58           <---------AHL20(2)    <-----------GT1     <------MYB46(1)    <---------ANAC46      <------    ----------->GT1     <-----------GT1             --------->MYB59<---------AtLEC2      <---------DAG2 ---->DOF2 --------->AHL20(2) <---------ICU4      <---------MYB52(1)    <---------ANAC58 <----------DOF2   agagaaaggttaattaaactgtgaattaacaattgttaccattggattgtatgttaggtcttgatatgtgcatgacttgtaacattaacaacttttcttt  7370500            <-----------GT1           --------->AHL20(2)        <---------ICU4       <---------ATHB12       <---------ATHB51       --------->AHL20(2)                                            <---------HSFB2a(2)       <---------AHL20(2)                             <-----------ARR10       --------->ICU4                                <---------CCA1(2)           --------->HSFB2a(2) ----DOF2  <---------AHL20(2)               <---------YAB1           --------->HSFB2a(2)            <   cttagccaaataattaactatttttcaaaaaaacattcaaacccttcttattcccaaatctaatttcatttctaaaaatacttctgtaatattcgaaact  7370600                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         <---------bZIP60(2)                                                                                         <---------O2                                                                                         <---------TGA1a                                                                                      ----------->HVH21                                                                                     ------->MYC3                                                                                     <-------MYC3                                                                                    --------->ANAC55(2)                                                                                    --------->ANAC58                                                                                    --------->TGA1a                                                                                    <---------ANAC58                                                                                    <---------bZIP60(1)                                                                                    <---------O2                                                                                    <---------bZIP60(2)                                                                                    --------->bZIP60(2)                                                                                    --------->bZIP60(1)                                                                                    --------->ANAC58                                                                                    --------->O2                                                                 ==================HOX2a_HOX2a                                                                 <------ZmHOX2a(2)  <---------ANAC58                                                                --------->ARR11(3)  <---------ANAC46                                                                <---------ARR11(3)  <---------TGA1a                                                       --------->AtLEC2             <---------ANAC55(2)                                                       --------->ANAC58             --------->ANAC46                                                     <---------ANAC58             <-------------DYT1         <---------AHL20(2)                          <---------ANAC46             ------------->DYT1         --------->AHL20(2)                          <---------ANAC58           <-----------HVH21        --------->YAB1                     ----------->HVH21=======================================bZIP_DOF  --------->YAB1                         --------->ANAC55(2)---------->DOF2 <------ZmHOX2a(1)     --- ----------->GT1          ------->TEIL   <---------ANAC55(2)==================================bZIP_DOF ---------WOX13(1)  <-------TEIL      --------->GLK1(2)--------->ANAC58 --------->ALFIN1 <---------ANAC58   ggattgataattttaatacatatacatgtatttgtgtaagaatatgtgacaaatggcatgcaaaaagatcgagggtgaggaatgtcacgtgacttgggaa  7370700                     --------->YAB1                     <---------ICU4                <---------AHL20(1)                --------->AHL20(1)                --------->AHL20(2)             --------->YAB1            <---------YAB1            <---------AHL20(2)           <---------AHL20(2)           <---------AHL20(1)           --------->AHL20(1)           --------->AHL20(2)   <-------TEIL        --------->AHL20(2)     --------->AtLEC2                                   <---------MYB52(1)=      --------->ARR11(3)       --------->ANAC58                     <-----------GT1        <---------      <---------ARR11(3)       --------->ANAC58               --------->YAB1     --------->LBD16  <--    ----------->GT1 --------->ICU4      <---------At4g35610 --------->GLK1(2)   <---------ANAC46  --- ------>TOE1(2) <---------AHL20(2)------->TEIL         ---------->DOF2          <---------ANAC55(2) -   catgagaagataatataataaaataatgaagacatgcatttgagcttctcacatttttaaagaatcagattaactctgtgttccgtcaatttctgtcatg  7370800  Previous    Next  AGI:  At5g22260.1    Description:  MS1 (MALE STERILITY 1); DNA binding. similar to MMD1 (MALE MEIOCYTE DEATH 1), DNA binding [Arabidopsis thaliana] (TAIR:AT1G66170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42422.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 7367638    to: 7370298    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version