Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            ------>MYB46(1)                                                          ------>MYB83                                                        --------->TOE2(2)                                                        --------->TOE1(2)                                                       <---------HSFB2a(1)                     <-----                                                      ------->TEIL                             <-----          --------->ARR14(2)                         <---------ARR11(3)                   <---------At4g35610          <---------ARR14(2)                       --------->ANAC58                   --------->TOE1(3)   --------->GLK1(1)                               --------->ANAC58                  ----------->RAV1(2) -------->GT1                                  --------->AtLEC2<---------ATHB12  <---------MYB59   gagtgaattccaaatcccatgaattgctatcaataagtgagaagaaaccgtgcaagaacctacgaatcaataggtagaacttatctaacctgagccgatc  6967600                --------->ANAC58                --------->ANAC58             <---------TGA1a             --------->O2             --------->TGA1a --------->ANAC46                           --------->MYB52(1)                 --------->At4g35610 <---------ANAC55(2)                   --------->ZAT14                  <---------WOX13(1) --------->ANAC55(2)                 --------->At5g28300         ====================================HOX2a_HOX2a -ZmHOX2a(2) --------->ANAC46       ----------->GT1              <------ZmHOX2a(1)--------->At4g35610 ----ATHB12  <---------O2          <---------DEAR3(1)  ---------->DOF2--------->ATHB12        <------ZmHOX2a(2)   aatacgagaccactcacgacgcatggtgaacaagaagacggtgaagtaatggatagacaaaggaagaggaagtgattgaagagcagaagagagacgatca  6967700                                                    <---------ANAC58                                                 --------->GLK1(2)                   --------->GLK1(1)                                                <---------GLK1(2)                    <---------GLK1(1)             ---------->DOF2                    <---------ARR14(2)            <---------At4g35610          <------MYB46(1)                       --------->KAN4(2)      <---------ARR11(3)          ----------->GT1                      --------->HSFC1(2)      --------->ARR11(3)          <------MYB83                         <---------HSFC1(2)      <---------ARR11(1)         <--        <---------WOX13(1)        --------->ANAC46  <---------ANAC58   <---------ARR14(2)         ---      --------->ATHB12      <---------ANAC58   --------->HSFB2a(1)     --------->ARR14(2)        <---     <---------YAB1         <---------ANAC58   <---------HSFB2a(1)    <---------CCA1(2)    <---------MYB52(1)   ataagttctgattggtaaagagacttatcagcgtgccagacacaatagaagattccttgccatagcttcttcatatcttcatcggagatttcagtttgtt  6967800                                              <---------WOX13(1)                                          <---------WOX13(1)                                      <------NtERF2                                      <---------ANAC46                                    <---------ANAC46                                  <-----------HVH21                                 <-----------RAV1(1)                                 ----------->HVH21                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)          --------->ANAC58                              --------->ARR14(2)          --------->ANAC58                              <---------ARR14(2)       --------->ANAC58                              <---------ARR11(3) <---------ANAC58                              <---------AGP1 <---------ANAC58                              --------->ARR11(3) <---------ANAC46                              --------->GLK1(2)  <---------ANAC58                           --------->ANAC58  <---------ANAC58    <----------DOF2  <----------ARF1          --------->ANAC58 --------->ATHB12  --------->ANAC58 -------HSFB2a(2)      --------->ANAC58  <---------ARR14(2)   --------->ANAC58 ------>HSFB2a(2)      --------->ANAC58--------->LBD16 --------->ANAC58 ------LBD16          <---------ZAT18<---------LBD16   --------->ANAC46      --------->ATHB12    <---   ctgggagccaagtacgaagaacagttcgcaaggatctgtcgcggattgattgcttacacgaagcaagcttttttatcaacgatttgcaatcttcttcgat  6967900                      --------->GLK1(1)                    <------NtERF2                 <---------LBD16                                                             <-------                <---------RAP2.3(1)                                                          --------                <---------ORA47(2)                                                           <-------                <---------ATERF1(1)                                                         <--------                ------>NtERF2                                                              ----------                --------->LBD16                                                         ------>NtERF2                <---------ERF1                                                         <---------bZIP60(1)               --------->DEAR3(1)                                                      --------->ATERF1(2)               <---------RAP2.3(3)                                                     --------->bZIP60(1)               --------->ATERF1(2)                                                     <---------RAP2.6(2)               <---------RAP2.3(2)                                                     <---------ATERF1(2)               <---------DEAR3(1)                                                     --------->RAP2.6(3)               <---------ATERF1(2)                                                   --------->MYB52(1)              <---------LBD16                                                       ----------->HVH21            <-----------RAV1(1)<---------ANAC58                           ----------->GT1<------NtERF2     <---------ANAC58--------->ARR14(2)                          --------->ANAC58   ----------->TGA1     <---------ANAC58<---------ARR14(2)     <---------YAB1       --------->ANAC58   --------->ALFIN1   <---------YAB1<------NtERF2 <---------ANAC58                  --------->ANAC46  <-----------HVH21   --------->ICU4--------->ATERF1(1)  <---------YAB1        <------ZmHOX2a(1)    --------->DAG2  <--- ------MYB46(3)<---------DREB2C(2)  <-----------GT1       <---------TOE2(3)    ---------->DOF2-------   gggtaatgcttgttctgccggcggaactcgattccgtttcaccattgttatcgaatttttgaggaagacgcaaaaaccgaaaaaaggtgacggcagattc  6968000          <--------P       <---------AtMYB61    <------ZmHOX2a(1)               ----------->HVH21   <------MYB83                    *TSS   <------MYB46(1)                --------->ANAC58 <--------P                       --------->ANAC55(2) --GLK1(2)--------->ALFIN1        --------->ANAC58 ->ARR14(2)                       <---------ANAC55(2) --ARR14(2)        ---------->DOF2----------->GT1             ---------->ID1         <-----------GT1 -At4g35610 <------MYB46(1)     <------ZmHOX2a(1)        <----------DOF2        ---------->ID1     <- ->ARR10<---------MYB46(3)   <---------------AtSPL8    <------------------------ANAC81       <------- ------ANAC46 <---------------------WRI1        <---------TOE2(3)         <---------YAB1    <-------- -->GLK1(2) <------MYB83 ---------->DOF2        <---------TOE1(3) <----------DOF2 <----------DOF2 <--   tgggtaggagaggttgggagataaagagaaagaaggacgtaacaaggattagggtttagcttttgtttctttcattttgtttgtcttttacattttaacc  6968100                                                                          <----------DOF2                                                                       --------->ARR11(3)                                                                   ---------->DOF2                                                              --------->ICU4                                                              <---------ATHB51                                                              --------->AHL20(2)                                                              <---------AHL20(2)                                                             <---------AHL20(1)                                                             --------->AHL20(2)   <----------DOF2                                       --------->YAB1<---------ARR11(3) <---------YAB1<---------AHL20(2)                  --------->YAB1 <---------AHL20(2) --------CCA1(2)              <---------ICU4      --------->AHL20(2)<---------TOE2(3) ----GT1       --------->AHL20(2)             <---------AHL20(2)  --------->AHL20(2) ---GT1       --------->AHL20(2)<---------YAB1--------->AHL20(2) <---------YAB1                   <-- -------MYB52(1)             <---------ATHB12--------->AHL20(2)<---------ICU4         --------->ARR11(3)   cttatctttacaaaaaaaaaattttgtccaaatcatttttgggacaatttaaataaaaatcaaaataattaaagttctttggaaaatagctcttgtttta  6968200                                                                           <---------ARR11(3)                                                                           --------->AHL20(1)                                                                           <---------AHL20(1)                                                                           --------->AHL20(2)                                                                           --------->ARR11(3)                                                              --------->ANAC46                                                              --------->YAB1                                                              --------->ANAC55(1)                                                <----------DOF2      <-----------GT1                                                ------>ZmHOX2a(1)  --------->ICU4                                             ---------->ID1   --------->ANAC55(2)                                         <----------DOF2      --------->ANAC58              ---------                                --------->AHL20(2)            ----------->GT1<---------GLK1(2) <---------DAG2          <----------DOF2 <---------DAG2       --------->ANAC58         <------------- ---------GT1  ------->TEIL     <---------AHL20(2)      --------->AtLEC2   <---------AHL20(2)   -----   aaaccttttgaaatacgaacattttttctttgattaaaatacactttatccttttgaaatgcaaacgtaattttcaatatattctcttggcataaaaaga  6968300                                                                               ======================                                                                               ------>ZmHOX2a(1)                                                                              --------->TOE2(3)    --                                                                           <---------ARR11(3)      --   <---------bZIP60(2)                                                     --------->ARR11(3)      <-  <---------TOE2(3)         --------->ICU4          --------->TOE1(3)     --------->CCA1(1)       --- ->DOF2                ----------->GT1      <-----------GT1    <---------AHL20(2)         <---------ATHB12 --AGL15               --------->YAB1     <----------DOF2     --------->AHL20(2)   <---------CCA1(2)- ---->ARR11(3)     <---------YAB1   <---------MYB46(3)  >>>>>>>>>MYB98    --------->RVE1(1)     -----   aattgacgttgcatcaaatttgtaattgtaatatttgatggtttctttactataccctaacttatttaatggagaaatatcctttgtatccaatctttga  6968400                                                                                         ---------->DOF2                                                                        <---------AHL20(1)             <---------ATHB12                                           --------->AHL20(2)             <---------ATHB51     <---------ICU4                        <---------AHL20(2) ====HOX2a_HOX2a                 --------->ICU4                    <-------TEIL         --------->AHL20(2) ------->HSFC1(1)              <---------ICU4             ------>ZmHOX2a(2)         <---------AHL20(2) ------->HSFB2a(2)             --------->YAB1            <---------At4g35610     --------->TOE2(3) --------HSFB2a(2)            <---------YAB1            <---------AGP1  --------->AHL20(1) --->ZmHOX2a(2) <---------ANAC55(2)                     --------->ARR14(2) <---------------AtSPL8 ---------->GT1 --------->ANAC55(2)    --------->ATHB12 <---------ARR14(2) --------------->AtSPL8<--- ---->ARR11(3)--------->YAB1  --------->ICU4     <---------TOE2(3)--------->CCA1(2)--------->AHL20(2)   tctagaaaattttcaattatgtgattcaagttataattatgtcattggtataagattggatctgagagatacaatttattgtacattaaataaaagatta  6968500  Previous    Next  AGI:  At5g20600.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO43199.1); contains InterPro domain Nucleolar, Nop52; (InterPro:IPR010301) Range:  from: 6966180    to: 6968035    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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