Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                                --------->ANAC58                        ------>MYB46(1)                      <---------MYB46(2)                      --------->ANAC55(2)                      <---------MYB111(1)                     --------->O2                      --------->AtMYB61                       <---------O2                      --------->MYB46(3)                      --------->TGA1a                     --------->ANAC58                         <---------TGA1a                     --------->ANAC58            --------->ANAC58                     --------->ANAC46            --------->ANAC46                   <----------ID1      ---------->DOF2      <-------------DYT1               <-------        ---------->DOF2 ------>MYB83   =================================bZIP_DOF<-----------GT1     < ------ZAT6 ----------->GT1  --------->MYB46(3)  --------->ANAC58              <-----------GT1-------   agtcaaaatagaaagtgtaaaacaccaaacaacaacgcattcaaagttggcaagccataaactcacatgactcaacagttttaaacccttctacagattc  6418600                                                     <---------YAB1                                                     <---------AHL20(2)                                               <---------ZAT18                                               --------->ZAT18                                       ==============================================================                                       ----------------->AG                                       <-----------------AGL2                    ----------->RAV1(2)         --------->ZAT18               ----------------->AGL2          <---------ANAC55(2)         <---------ZAT18               ----------------->AGL3          ----------->GT1 --------->YAB1     --------->LBD16  --------->ARR14(2)                --------->ANAC55(2) --GLK1(2)--------->ZAT6             <---------ARR14(2) <---------WOX13(1)<-----------GT1          -- ---------ATHB12   <-----------RAV1(2) ----------------->AGL1     <---------TOE2(3)                <- -->GLK1(2)   <---------ICU4<---------------AtSPL8 <----------DOF2<---------TOE1(3)                <-   caatcgtatagaacactaattccaggttaacatgtacagtatccaaatgtggactttaattgaattctaaggtatgtaacaaaacctggcattagagcat  6418700                                                           --------->ZAT2                                                           --------->At4g35610                                                        <---------ZAT2                                                        --------->At4g35610                                          --------->At4g35610                                       --------->At4g35610 <---------At4g35610                                       <---------At4g35610 <---------ZAT2                                       --------->ZAT2   --------->ZAT2                      --------------->AGL15             <---------At4g35610                      <---------------AGL15            ----------->RAV1(1)                        <--                     <-----------------AGL1 ------>NtERF2 ----------->RAV1(1)                 <------      <---------REM1(1)                <---------ZAT2  --------->ANAC46                    <------ZmHOX2a(2) =====================================MADS_MADS       <-----------RAV1(2)                 --------->ARR11(3) ------->HSFB2a(2)   <-----------------AG<---------ATERF1(1)            --------->ANAC46  <---------ARR11(3) --------HSFB2a(2)   ----------------->AGL1--------->DEAR3(1)         --------->AtMYB61--------->YAB1 --------LBD16   <----------DOF2 ---------->DOF2      ================RAV        --------->YAB1 -----   tctcggagatgtaagtgttctttgccagtagaggcaaaagcagcagcgccaaaaccccagcagcagagaaaaccacactacaaacacaatcagatcatca  6418800                                                                   <-----------GT1                                                                <---------ARR14(2)                                                                <---------ARR11(3)                  <                                                                --------->ARR14(2)                  -                                              ----------->GT1   --------->ARR11(3)                  <     ---------->DOF2                  <---------ANAC46 <---------YAB1 --------->TOE1(3)            -- ------->TEIL                       --------->ZAT18    <---------TOE2(3)                           <- -------ATHB12                      <---------ZAT18    <---------TOE1(3)                           <- ---YAB1   ---------->DOF2          --------->ZAT14 <---------ATHB51  --------->TOE2(3)         <---- ---->WOX13(1)    --------->YAB1    <---------ZAT14 --------->ICU4 <<<<<<<<<GT-1<------ZmHOX2a(1)  --   atgaaccaaaagagaaagaatcaaaacatagaaactagtggagtagaagagaaaattatggttgaagatttacctgaaaacaggactgtgagcgatgagg  6418900            --------->SPL7           --------->MYB52(1)          <---------SPL7                      --------->ATHB12         --------->DEAR3(1)                --------->WOX13(1)                          ------>NtERF2    <---------ANAC58                      <-------TEIL                              <---------At4g35610    <---------ANAC58                     <------ZmHOX2a(2)                     --------->ZAT14 --------->GLK1(2)                       =============================HOX2a_HOX2a  --------->DEAR3(1) ---------ARR14(2)                      --------->ARR14(2)                     <---------ZAT14 -------->ARR14(2)                      <---------ARR14(2)                     <-------TEIL ---------GLK1(2)                       --------->ARR11(3)                    <-----------HVH21 ------->HSFC1(2)                       <---------ARR11(3)                  --------->LBD16<---------ATHB12 --------HSFC1(2)<---------AtMYB61      --------->AGP1                     --------->LBD16 <---------YAB1 --------HSFB2a(1)<------MYB46(1)      <---------GLK1(1)                  <---------LBD16  --------->ICU4 --ZmHOX2a(1) --------->ATHB12         --------->GLK1(1)              <---------ICU4--------->At4g35610 ------->HSFB2a(1)<------MYB83       <------ZmHOX2a(1)         ------>ZmHOX2a(1) <---------At5g28300<   aagattccgagccgaacgattggtctcggtttgattttaggagatccatcatcggtcttcacttcctcttcattatcccggttcaccgctgccatgattc  6419000                                ------>MYB83                                --------->SPL7                                ------>MYB46(1)                              --------->TOE2(2)                              --------->TOE1(2)                             --------->HSFC1(2)                             <---------HSFC1(2)         <------ZmHOX2a(2)   <---------HSFB2a(1)   ------>ZmHOX2a(2)         --------->HSFB2a(1)                                                   <-  <------ZmHOX2a(2)          --------->DEAR3(2)               <------------CBF           --------->At4g35610 --------->ARR14(2)         ------->TEIL               <---------ANAC58                <---------WRKY12 <---------GLK1(2)      <-------TEIL                   <---------ANAC46                <---------WRKY38(1) <-----------ARR10    <---------GLK1(2)                <---------ANAC58                ---------->CDC5 <---------ARR14(3)   --------->ARR11(1)           --------->LBD16                   <-----------HVH21 --------->ARR14(3)   <---------ARR14(2)         <---------LBD16               <---------O2        <- <---------ARR14(2)   --------->ARR14(2)       ------>ZmHOX2a(2)               --------->O2---------- --------->ARR11(3)  <---------HSFB2a(1)      --------->GLK1(1)              <---------WRKY12  ------ <---------ARR11(3) ----------->ARR10         <---------GLK1(1)              <---------WRKY38(1)   <- --------->AGP1--------->RAP2.6(3)           --------->ARR11(3)             --------->WRKY18(1)<----- ---------CCA1(2) <---------At4g35610*TSS    <---------ARR11(3)            <-----------HVH21---------   acagatcttcgatcaatttcggcagattcgaacctacgacgaactgtgatctccgtggcttgggaattgtagacgacggtcaagtcgggtcagcccgaat  6419100          <----------DOF2      --------->ZAT18     --------->ALFIN1   <---------ANAC46   <---------ANAC58   --------->ALFIN1   <------MYB46(1)   <---------ANAC58   <------MYB83  --------->MYB55(2)  <---------MYB46(3)  --------->MYB111(1)  <---------DEAR3(1)  --------->MYB46(2)                                                               <---------HSFB2a(1)  <---------AtMYB61                                                                --------->HSFB2a(1)  --------->MYB111(2)                                                            <---------GLK1(2) --------->ALFIN1                                                            <---------ZAT18 --------ANAC58                                                              --------->ZAT18 --------ANAC58                                                       <---------YAB1 ------->AGL1                                             ---------->DOF2<---------------AtSPL8 --->ARR14(2)                                 <---------ANAC58        <---------TOE2(3)             - --------ANAC46                      <----------DOF2    <----------DOF2  --------->ALFIN1         --- ----ARR14(2)                      ------->TEIL ----------->HVH21--------->At4g35610              --- >LBD16 ----------->GT1  <----------DOF2      <---------ANAC58   <---------At4g35610            <----   agggtgggtgggcttaaatttagaaggctttgtaatggacttttatttgggtgatgggcttaaagtcagattaagatggtgcagaattttcttacatacc  6419200        <---------YAB1  <---------AHL20(2)  <---------YAB1 --------->AHL20(2) --------->AHL20(1) <---------AHL20(1)                                           ----------->GT1           ------->TEIL -------->YAB1                    <---------YAB1         <---------AHL20(2)            <---------CCA1(2) --->MYB83                      <---------AHL20(2)       --------->AHL20(2)--------->ZAT14        <-- --->MYB46(1)         ---------->DOF2                    --------->AHL20(1)<---------ZAT14      <---- -----MYB59   <---------YAB1    --------->AHL20(2)    --------->YAB1  <---------YAB1--------------->AtSPL8   aaatataattgttattttgattacaaaagtatatttatatttgttcttaattttaaaaataaaatggataatatcagtgttcttaatttgtatcttattt  6419300                                                                        <---------YAB1                                                                <---------AHL20(2)                                                               --------->AHL20(2)                                                    <---------AHL20(2)--------->YAB1                                                  <---------RVE1(1)  <---------YAB1                                                 <---------GLK1(2)<---------YAB1                        <---------YAB1           --------->ARR11(3)--------->YAB1                      --------->YAB1      <-------GAMYB        --------->ICU4                     --------->ICU4   <---------WRKY18(1)   --------->AHL20(2)             <---------DAG2    <-----------GT1   <---------ARR11(3)<---------ICU4             <----------DOF2 <---------YAB1<---------YAB1   <---------AHL20(2)          ----------->GT1 -------AHL20(2)     <---------ATHB51--------->WRKY38(1)<---------AHL20(2)          --------->ARR14(2) -----AHL20(2)    <---------YAB1     --------->WRKY12   --------->AHL20(2)          <---------ARR14(2)   taaaatgaagaaacacttttacaattatgttattatccattgactgttatagatttttttaaatatttattattataaatgaccagtatatggtattttt  6419400                                              <---------ZAT14                  ---------->DOF2                                              --------->ZAT14            ----------->GT1                                              <---------ZAT18            --------->ANAC58                                              --------->ZAT18            --------->ANAC58        ----                                      <----------DOF2                   --------->DAG2   --------->GLK1(2)                                  --------->ZAT18                 ---------->DOF2        --------->ARR14(2)                                  <---------ZAT18       <---------YAB1 ---------->DOF2   <---------ARR14(2)   gctattacatcatagcaagatgggaacatgaaatagtgggctatacagtgcagtccatattatcgcatcaaagaaaagcaaaaaagaagagaaactgcca  6419500  Previous    Next  AGI:  At5g19130.1    Description:  GPI transamidase component family protein / Gaa1-like family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO14706.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59886.1); contains InterPro domain Gaa1-like, GPI transamidase component; (InterPro:IPR007246); contains InterPro domain Glycosylphosphatidylinositol:protein transamidase, GAA1 component (InterPro:IPR017063) Range:  from: 6415922    to: 6419037    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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