Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                                  --------->TOE1(3)                                  --------->TOE2(3)------->GAMYB            ======================================MADS_MADS            ----------------->AGL3<---------------AGL15                                            --            --------->MYB46(3)   <-----------------AGL1    --------->WRKY45                       <--        --------->DEAR3(1)       ----------------->AGL1    --------->WRKY38(1)                    ---        --------->WRKY38(1)      ----------------->AG      --------->WRKY12                 ---------        --------->WRKY12         ----------------->AGL2    ----------->HVH21                ---------        --------->ETT(2)       <-----------GT1  <---------DOF5.7(2)                       --------->MYB52(1)        <---------ETT(2)     --------->YAB1    <---------WRKY12                          --------->AtMYB61     <---------TGA1a     --------->ICU4        <---------WRKY38(1)<---------ARR14(2)     <---------ALFIN1     --------->TGA1a   ----------->RAV1(1)     <---------WRKY45   --------->ARR14(2)    --------->MYB46(3)     --------->O2   --------->ANAC58      <---------MYB52(1)<---------WRKY18(1)         <---------MYB55(2)     <---------O2   --------->ANAC58     --------->LBD16  --------->DOF5.7(2)           <---------ABI4(2) --------HSFB2a(2)  --------->ANAC46   <---------LBD16 <---------ATHB12        --------->ICU4--------   tctagagacgtcgacccacaagaagcaacaattataccttaaccggaagtcaacgcaatcgttgaccagagcctcgatgtaagaattggaaccaccggct  6363000                                                                           <---------HSFB2a(1)                                                                          <---------ARR11(3)       <-                                                                          --------->ARR11(3)      ---                                                                         --------->GLK1(1)       ----                                              <---------ANAC58       --------->At5g28300        -----                                              <---------ANAC58       --------->LBD16           <-----                                   ------>NtERF2                  ------>NtERF2                <-----                                  --------->ANAC46                --------->LBD16             <------         --------->ANAC58         <---------DEAR3(1)             --------->DEAR3(1)          <-------  ------>ZmHOX2a(2)              --------->RAP2.6(3)             --------->ANAC46          --------->WRKY12 ------->ATHB12                 --------->MYB52(1)         <---------ARR11(3)           <---------O2< -------YAB1                   ----------->HVH21   --------->ANAC46 <---------ANAC46    <---------ANAC58 -------->HVH21        --------->ATHB12  --------->ATHB12  --------->ARR14(2)           <---------bZIP60(2) >DREB2C(2)       <---------HSFB2a(2)   --------->ICU4     --------->ARR11(3)           <---------ANAC46 >DEAR3(1)        --------->HSFB2a(2)   <---------YAB1     <---------ARR14(2)           <---------ANAC58 ->LBD16 --------->ANAC58<---------WOX13(1)<---------WOX13(1)  ------>ZmHOX2a(1)      <-----------HVH21   atgatcgggacacggtctctctggacgattgactcgacggccctgattgcttcacgctgaaaatcctccgccgtgaaatcttcgtaagtgtcgtggacgg  6363100         <---------MYB46(3)        --------->ALFIN1     --------->DAG2 ------>NtERF2                                                                  <---------ARR11(3) -----NtERF2                                                                    --------->ARR14(2) --->NtERF2                                                                     <---------AGP1 ----->ALFIN1                    <-----------RAV1(2)                           <---------CCA1(2) ---->ATERF1(1)           <---------ANAC58                                  <---------LBD16   <------ ----ATERF1(1)            <---------ANAC58                      <---------ARR11(3)     --------->ETT(1) ----DEAR3(2)     --------->ANAC58             <---------MYB52(1)         <---------AGP1 <------NtERF2 ---DEAR3(1)   <------ZmHOX2a(1)------>ZmHOX2a(1)--------->MYB52(2)<----------DOF2------>ZmHOX2a(2) --ORA47(1)<---------ANAC46<----------DOF2 <----------DOF2   --------->HSFB2a(2)<---------ARR14(2) ---------ANAC46  --------->ANAC58  <------ZmHOX2a(1)        <---------HSFB2a(2)--------->ARR11(3)   tgccgagaaggtggtgaggaacgccaaggctttcctcaggagtgactttgttagtcacaatgtctagacctttatagacctggatcttgtcggagtttac  6363200                                                          <------NtERF2                                                         ------>NtERF2                                                         --------->ABI4(2)                                                         <---------ATERF1(1)                                                         <---------MYB46(3)                                                        --------->ALFIN1                                                       <---------MYB52(1)        <------NtERF2                                 --------->LBD16       --------->LBD16                              <---------LBD16      --------->LBD16                             --------->ARR14(2)      --------->RAP2.3(2)                         <---------ARR14(2)                               --      --------->RAP2.6(2)                       <---------DEAR3(2)                                 --     <---------LBD16      <---------WRKY12--------->CCA1(2)                                    ------    --------->LBD16       <---------WRKY38(1) ----------------->AGL1                         <------NtERF2    ------>NtERF2        --------->WRKY18(1)  <---------LBD16    ----------->HVH21          ---------   --------->DEAR3(1)   <-----------HVH21--------->ARR14(2)      ----------->TGA1          --------->LBD16   --------->ANAC46     <--------ZAP1    <---------ARR14(2)<---------PCF2                 <---------LBD16  <---------LBD16      <------MYB83      <---------GLK1(2)--------->ATERF1(1)       <----------DOF2-- -----GT1              <------MYB46(1) ----------->ARR10<---------DEAR3(1)        ---------->ID1 ----   aatctccgccggaaaacgagtggctaggtcaatggctagacgagatttgccggttccggtggctcccatgacgaaaacaaccttgtcttttcgccggaaa  6363300                                                                   --------->AtLEC2                                                                <------NtERF2                                                                <---------MYB52(1)                                                               <-----------TGA1                                                               <-----------HVH21                                                               <---------RAP2.6(3)                                                              --------->RAP2.6(2)                                                              --------->DEAR3(1)   --------->SPL7                                             --------->RAP2.3(3)  --------->ARR14(2)             ------->GAMYB                >>>>>>>>>AtERF-3 ------->ANAC58                 --------->MYB46(3)            --------->RAP2.3(2) ------->ANAC58                 --------->ANAC46              >>>>>>>>>AtERF-4 ---->DOF2                   <---------WRKY12    --------->ANAC55(2)      <---------ANAC58 >LBD16            <---------ANAC46              <---------ANAC55(2) <---------AtLEC2 --------->YAB1 ------->ANAC46    <---------ANAC58    <---------MYB46(3)    --------->RAP2.3(1)  <---------YAB1  <-- ----->MYB52(1)    <---------ANAC58    --------->ATHB12  ---------->DOF2  <---------ANAC58     <-----   aacggaacgtccaccatgtttccttggaagttcaacgacaatggttgaatcacttgtcttagagccgtcatgcatggcttcattcttataaaaactcctt  6363400                               --------->AHL20(1)                               <---------AHL20(1)                             <---------TOE2(3)                     ----------->GT1                     --------->ANAC55(2)                                     <-------TEIL                  --------->ICU4                                            --------->ARR14(1)               *TSS  <---------ANAC55(2)                            ------------>CBF        --------->At4g35610--------->AHL20(2)                      --------->ANAC58        <---------ZAT2     <---------AHL20(2)                      --------->ANAC46        --------->ZAT2 <---------AHL20(2)                   --------->YAB1 --------->ARR11(1)     ----------->RAV1(2)  --------->ICU4                 --------->YAB1    <---------GLK1(2) ---------GT1  <---------AHL20(2)                  --------->YAB1  --------->AtLEC2 -----DOF2     --------->AHL20(2)              --------->ICU4      --------->ANAC58      ---------->DOF2   taacttcccctgctggattaattatgtaattaatatttttaagacagaactaattagaagcataataacatgcaatagattcgtttgatgtcaaagtaga  6363500                                               XXXXXXXXXXXXXXXXXXXX>MIR408                      --------->TOE1(3)      --------->ZAT14                    -------->P               <---------ZAT14               <-----------GT1            --------->LBD16                            --------->YAB1           <---------ARR14(2)            --------->ANAC46                         --------->YAB1           --------->ARR14(2)            --------->LBD16                    --------->YAB1           <---------ARR11(3)           <---------LBD16                  --------->YAB1         --------->LBD16                --------->LBD16               --------->HSFB2a(2)          <-        --------->LBD16         <---------ANAC58                      <---------HSFB2a(2)          <-       --------->HSFB2a(2)      <---------ANAC58             <-----------HVH21 --------->YAB1    <---       <---------LBD16--------->TOE2(3)<---------LBD16    <---------ANAC58--------->AHL20(2) <-------       <---------HSFB2a(2)      <---------ANAC46          <---------ANAC58<---------AHL20(2) ========   gacaccgttcccggatattactaaccttgaagtggcttgttccccggagcactgtctcttccctgtcaatttctataaaaataacaataatcttcctttt  6363600                                                                                                 <---                                                                                                <----                                                                                               ------       <---------TOE2(3)                                                                       ======       <---------TOE1(3)                                                                     --------       <---------YAB1                                                                        <------- --------ANAC58         --------->TGA1a                                                     <------ZmHOX2a(1) --------ANAC58         <---------TGA1a                                                <------ZmHOX2a(1) --------GT1  <---------YAB1                                                         <---------TOE2(3) ---DOF2  <---------WOX13(1)<---------YAB1                                      <-----------RAV1(1)<- =================================bZIP_DOF                               ------->GAMYB ==============   ttcttgtttaagattgattatagctcaagtgtgatagttcatatatagaaatactgaaacttatcttgctctcaacgagcatatgttgaggaaaggatcg  6363700                                                                                            ------->MYC4                                                                                            -------->ABF1                                                                                            <-------MYC2                                                                                            <-------MYC4        <---------AHL20(2)      <---------ZAT6                                              ------->MYC2 ------RAP2.6(2)                ----------->GT1                                             <-------MYC3 -----LBD16                   <---------At5g28300                                           ------->MYC3 >ZmHOX2a(2)           <------ZmHOX2a(1)                                                   --------->TGA1a =============================HOX2a_HOX2a                                                  <---------ANAC55(2) ->ARR14(2)      <---------ANAC58                                                          <---------TGA1a --ARR14(2)      <---------ANAC58                                          --------->ZAT6  --------->ANAC55(2) -----NtERF2     <---------ANAC46           <---------TOE2(3)         <---------LBD16      --------->O2 =HOX2a_HOX2a  <---------MYB46(3)      --------->ICU4                <-----------GT1       <---------O2   cggcttcgaatttatagtggctggaggaatgttactgtgaaatgttgatgttattcattttgttttatattttacggacactagctccataacacgtgtc  6363800                                              -------->ATHB1                                              --------->ATHB12                                              <---------ICU4                                            --------->GLK1(2)    <----------DOF2                -----                                     --------->ANAC58       <---------MYB46(3)               --------                                     --------->ANAC46       <------MYB83                  --------->YAB1                                <----------DOF2         --------->ATHB12                --------->AHL20(2)                            ---------->ID1 --------->YAB1 <---------WOX13(1)            --------->AHL20(1)           <-------TEIL     <---------CCA1(2)<---------YAB1 <------MYB46(1)            --------->YAB1       <-------TEIL<-----------GT1   --------->ANAC58  <---------YAB1     <---------MYB52(1) --------   tcaaaatgatacatacatatatttctattcgtctctttcactcaagaatcattgaatgtgattggttctttcaccagttagtataacaaaaataatagta  6363900  Previous    Next  AGI:  At5g19040.1    Description:  ATIPT5 (Arabidopsis thaliana isopentenyltransferase 5); transferase, transferring alkyl or aryl (other than methyl) groups. similar to ATIPT7 (Arabidopsis thaliana isopentenyltransferase 7), transferase, transferring alkyl or aryl (other than methyl) groups [Arabidopsis thaliana] (TAIR:AT3G23630.1); similar to isopentenyltransferase [Brassica rapa subsp. pekinensis] (GB:BAE43828.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Helix-turn-helix, Fis-type; (InterPro:IPR002197); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593) Range:  from: 6361839    to: 6363415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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